RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A AIM41Q12032 185 aa2.09□□□□□ -2.07
YER088C-AYER088C-A RTK1Q12100 620 aaPredicted RBP2.09□□□□□ -2.07
YER088C-AYER088C-A POM34Q12445 299 aa2.09□□□□□ -2.07
YER088C-AYER088C-A LEU2P04173 364 aaPredicted RBP2.08□□□□□ -2.08
YER088C-AYER088C-A PHO2P07269 559 aa2.08□□□□□ -2.08
YER088C-AYER088C-A MIS1P09440 975 aaKnown RBP2.08□□□□□ -2.08
YER088C-AYER088C-A ARG1P22768 420 aa2.08□□□□□ -2.08
YER088C-AYER088C-A CHS3P29465 1165 aa2.08□□□□□ -2.08
YER088C-AYER088C-A PRE4P30657 266 aa2.08□□□□□ -2.08
YER088C-AYER088C-A RPT3P33298 428 aaKnown RBP2.08□□□□□ -2.08
YER088C-AYER088C-A UME6P39001 836 aa2.08□□□□□ -2.08
YER088C-AYER088C-A SSP120P39931 234 aaKnown RBP2.08□□□□□ -2.08
YER088C-AYER088C-A KHA1P40309 873 aa2.08□□□□□ -2.08
YER088C-AYER088C-A RAD26P40352 1085 aa2.08□□□□□ -2.08
YER088C-AYER088C-A PRM2P40534 656 aa2.08□□□□□ -2.08
YER088C-AYER088C-A SAP4P53036 818 aa2.08□□□□□ -2.08
YER088C-AYER088C-A DIP5P53388 608 aa2.08□□□□□ -2.08
YER088C-AYER088C-A YNR071CP53757 342 aa2.08□□□□□ -2.08
YER088C-AYER088C-A TIM50Q02776 476 aa2.08□□□□□ -2.08
YER088C-AYER088C-A ARA2Q04212 335 aa2.08□□□□□ -2.08
YER088C-AYER088C-A YCG1Q06680 1035 aa2.08□□□□□ -2.08
YER088C-AYER088C-A BRE1Q07457 700 aaKnown RBP2.08□□□□□ -2.08
YER088C-AYER088C-A URA3P03962 267 aa2.07□□□□□ -2.08
YER088C-AYER088C-A CTT1P06115 562 aa2.07□□□□□ -2.08
YER088C-AYER088C-A HEM1P09950 548 aaPredicted RBP2.07□□□□□ -2.08
YER088C-AYER088C-A PFK2P16862 959 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
YER088C-AYER088C-A PMA2P19657 947 aa2.07□□□□□ -2.08
YER088C-AYER088C-A RIT1P23796 513 aa2.07□□□□□ -2.08
YER088C-AYER088C-A CLB4P24871 460 aa2.07□□□□□ -2.08
YER088C-AYER088C-A CWH43P25618 953 aa2.07□□□□□ -2.08
YER088C-AYER088C-A RPS7AP26786 190 aaKnown RBP2.07□□□□□ -2.08
YER088C-AYER088C-A EHT1P38295 451 aa2.07□□□□□ -2.08
YER088C-AYER088C-A COS111P38308 924 aa2.07□□□□□ -2.08
YER088C-AYER088C-A CRG1P38892 291 aaRIP-Chip data2.07□□□□□ -2.08not detected
YER088C-AYER088C-A STT3P39007 718 aaKnown RBP2.07□□□□□ -2.08
YER088C-AYER088C-A SPC72P39723 622 aa2.07□□□□□ -2.08
YER088C-AYER088C-A YEL025CP39991 1188 aa2.07□□□□□ -2.08
YER088C-AYER088C-A KAP123P40069 1113 aaKnown RBP2.07□□□□□ -2.08
YER088C-AYER088C-A VFA1P40080 203 aa2.07□□□□□ -2.08
YER088C-AYER088C-A RPT2P40327 437 aaKnown RBP2.07□□□□□ -2.08
YER088C-AYER088C-A TMA108P40462 946 aa2.07□□□□□ -2.08
YER088C-AYER088C-A PEF1P53238 335 aa2.07□□□□□ -2.08
YER088C-AYER088C-A IDP3P53982 420 aaKnown RBP2.07□□□□□ -2.08
YER088C-AYER088C-A MRPL13Q02204 264 aa2.07□□□□□ -2.08
YER088C-AYER088C-A SVL3Q03088 825 aaKnown RBP2.07□□□□□ -2.08
YER088C-AYER088C-A CRC1Q12289 327 aa2.07□□□□□ -2.08
YER088C-AYER088C-A ENT1Q12518 454 aa2.07□□□□□ -2.08
YER088C-AYER088C-A INH1P01097 85 aa2.06□□□□□ -2.08
YER088C-AYER088C-A ADE3P07245 946 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A YAP1P19880 650 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A SWI4P25302 1093 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A RER1P25560 188 aa2.06□□□□□ -2.08
YER088C-AYER088C-A FEN2P25621 512 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A MGM1P32266 881 aa2.06□□□□□ -2.08
YER088C-AYER088C-A MCM10P32354 571 aa2.06□□□□□ -2.08
YER088C-AYER088C-A CNS1P33313 385 aa2.06□□□□□ -2.08
YER088C-AYER088C-A RMA1P36001 430 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A TEF4P36008 412 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A STB5P38699 743 aa2.06□□□□□ -2.08
YER088C-AYER088C-A YLF2P38746 405 aa2.06□□□□□ -2.08
YER088C-AYER088C-A NOC2P39744 710 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A TMN3P40071 706 aa2.06□□□□□ -2.08
YER088C-AYER088C-A FTR1P40088 404 aa2.06□□□□□ -2.08
YER088C-AYER088C-A PUG1P40100 303 aa2.06□□□□□ -2.08
YER088C-AYER088C-A CAB2P40506 365 aa2.06□□□□□ -2.08
YER088C-AYER088C-A MAD2P40958 196 aa2.06□□□□□ -2.08
YER088C-AYER088C-A RFX1P48743 811 aa2.06□□□□□ -2.08
YER088C-AYER088C-A SNF12P53628 566 aa2.06□□□□□ -2.08
YER088C-AYER088C-A CPR6P53691 371 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A ARC35P53731 342 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A DAK1P54838 584 aaKnown RBP2.06□□□□□ -2.08
YER088C-AYER088C-A TRS130Q03660 1102 aa2.06□□□□□ -2.08
YER088C-AYER088C-A VPS64Q03944 604 aa2.06□□□□□ -2.08
YER088C-AYER088C-A IWR1Q07532 353 aaPredicted RBP2.06□□□□□ -2.08
YER088C-AYER088C-A SRL1Q08673 210 aa2.06□□□□□ -2.08
YER088C-AYER088C-A TUF1P02992 437 aaKnown RBP2.05□□□□□ -2.08
YER088C-AYER088C-A TPK1P06244 397 aa2.05□□□□□ -2.08
YER088C-AYER088C-A NCP1P16603 691 aaKnown RBP2.05□□□□□ -2.08
YER088C-AYER088C-A SIR1P21691 654 aa2.05□□□□□ -2.08
YER088C-AYER088C-A URE2P23202 354 aaKnown RBP2.05□□□□□ -2.08
YER088C-AYER088C-A MCM3P24279 971 aaKnown RBP2.05□□□□□ -2.08
YER088C-AYER088C-A YCL049CP25577 312 aa2.05□□□□□ -2.08
YER088C-AYER088C-A SWC3P31376 625 aa2.05□□□□□ -2.08
YER088C-AYER088C-A GCD7P32502 381 aaPredicted RBP2.05□□□□□ -2.08
YER088C-AYER088C-A MTC7P32633 139 aa2.05□□□□□ -2.08
YER088C-AYER088C-A XRS2P33301 854 aa2.05□□□□□ -2.08
YER088C-AYER088C-A LNP1P38878 278 aa2.05□□□□□ -2.08
YER088C-AYER088C-A YMR124WP39523 943 aaKnown RBP2.05□□□□□ -2.08
YER088C-AYER088C-A SKP2P42843 763 aa2.05□□□□□ -2.08
YER088C-AYER088C-A GSM1P42950 618 aa2.05□□□□□ -2.08
YER088C-AYER088C-A ZAP1P47043 880 aa2.05□□□□□ -2.08
YER088C-AYER088C-A ACS1Q01574 713 aa2.05□□□□□ -2.08
YER088C-AYER088C-A ATG21Q02887 496 aa2.05□□□□□ -2.08
YER088C-AYER088C-A FDC1Q03034 503 aa2.05□□□□□ -2.08
YER088C-AYER088C-A TRI1Q05024 226 aa2.05□□□□□ -2.08
YER088C-AYER088C-A CIA1Q05583 330 aa2.05□□□□□ -2.08
YER088C-AYER088C-A YFT2Q06676 274 aa2.05□□□□□ -2.08
YER088C-AYER088C-A CSR1Q06705 408 aaKnown RBP2.05□□□□□ -2.08
YER088C-AYER088C-A OPY2Q06810 360 aa2.05□□□□□ -2.08
YER088C-AYER088C-A CRD1Q07560 283 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms