RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C DSN1P40568 576 aa5.9□□□□□ -1.46
SEC20YDR498C SNG1P46950 547 aa5.9□□□□□ -1.46
SEC20YDR498C TMA22P47089 198 aaPredicted RBP5.9□□□□□ -1.46
SEC20YDR498C YGR127WP53275 312 aa5.9□□□□□ -1.46
SEC20YDR498C YPR003CP53394 754 aa5.9□□□□□ -1.46
SEC20YDR498C LSC1P53598 329 aaKnown RBP5.9□□□□□ -1.46
SEC20YDR498C YNL247WP53852 767 aaKnown RBP5.9□□□□□ -1.46
SEC20YDR498C UBX4P54730 416 aa5.9□□□□□ -1.46
SEC20YDR498C AIM32Q04689 311 aa5.9□□□□□ -1.46
SEC20YDR498C YLR177WQ06251 628 aa5.9□□□□□ -1.46
SEC20YDR498C MAG2Q06436 670 aaKnown RBP5.9□□□□□ -1.46
SEC20YDR498C THI20Q08224 551 aa5.9□□□□□ -1.46
SEC20YDR498C CUE5Q08412 411 aaKnown RBP5.9□□□□□ -1.46
SEC20YDR498C OSW1Q08692 278 aa5.9□□□□□ -1.46
SEC20YDR498C GPM2Q12008 311 aa5.9□□□□□ -1.46
SEC20YDR498C TAF10Q12030 206 aa5.9□□□□□ -1.46
SEC20YDR498C MET32Q12041 191 aa5.9□□□□□ -1.46
SEC20YDR498C NBP2Q12163 236 aa5.9□□□□□ -1.46
SEC20YDR498C ERR1P0CX10 437 aa5.89□□□□□ -1.47
SEC20YDR498C ERR2P0CX11 437 aa5.89□□□□□ -1.47
SEC20YDR498C VPS3P23643 1011 aa5.89□□□□□ -1.47
SEC20YDR498C ADK2P26364 225 aa5.89□□□□□ -1.47
SEC20YDR498C PDB1P32473 366 aaKnown RBP5.89□□□□□ -1.47
SEC20YDR498C KDX1P36005 433 aa5.89□□□□□ -1.47
SEC20YDR498C KTR7P40504 517 aa5.89□□□□□ -1.47
SEC20YDR498C MND2P40577 368 aa5.89□□□□□ -1.47
SEC20YDR498C ERR3P42222 437 aa5.89□□□□□ -1.47
SEC20YDR498C PAN2P53010 1115 aaPredicted RBP5.89□□□□□ -1.47
SEC20YDR498C NRD1P53617 575 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
SEC20YDR498C KTR5P53966 522 aaPredicted RBP5.89□□□□□ -1.47
SEC20YDR498C SKY1Q03656 742 aa5.89□□□□□ -1.47
SEC20YDR498C CMS1Q07897 291 aaKnown RBP5.89□□□□□ -1.47
SEC20YDR498C FMP25Q08023 583 aa5.89□□□□□ -1.47
SEC20YDR498C YLR053CQ12026 108 aa5.89□□□□□ -1.47
SEC20YDR498C GPM3Q12326 303 aa5.89□□□□□ -1.47
SEC20YDR498C HAP2P06774 265 aa5.88□□□□□ -1.47
SEC20YDR498C MET16P18408 261 aaPredicted RBP5.88□□□□□ -1.47
SEC20YDR498C PAH1P32567 862 aa5.88□□□□□ -1.47
SEC20YDR498C DSS4P32601 143 aa5.88□□□□□ -1.47
SEC20YDR498C GDA1P32621 518 aa5.88□□□□□ -1.47
SEC20YDR498C HMT1P38074 348 aa5.88□□□□□ -1.47
SEC20YDR498C RFS1P38234 210 aaKnown RBP5.88□□□□□ -1.47
SEC20YDR498C BIT2P38346 545 aa5.88□□□□□ -1.47
SEC20YDR498C FSH1P38777 243 aaKnown RBP5.88□□□□□ -1.47
SEC20YDR498C RAD55P38953 406 aa5.88□□□□□ -1.47
SEC20YDR498C YAT2P40017 923 aa5.88□□□□□ -1.47
SEC20YDR498C OPT1P40897 799 aa5.88□□□□□ -1.47
SEC20YDR498C VTC4P47075 721 aa5.88□□□□□ -1.47
SEC20YDR498C PEX31P53203 462 aa5.88□□□□□ -1.47
SEC20YDR498C HST3P53687 447 aa5.88□□□□□ -1.47
SEC20YDR498C YPL109CQ02981 657 aa5.88□□□□□ -1.47
SEC20YDR498C VPS16Q03308 798 aa5.88□□□□□ -1.47
SEC20YDR498C SHE9Q04172 456 aa5.88□□□□□ -1.47
SEC20YDR498C ESC8Q08119 714 aa5.88□□□□□ -1.47
SEC20YDR498C HRT3Q12347 344 aa5.88□□□□□ -1.47
SEC20YDR498C CCH1P50077 2039 aa5.87□□□□□ -1.47
SEC20YDR498C TAO3P40468 2376 aa5.87□□□□□ -1.47
SEC20YDR498C QCR6P00127 147 aa5.87□□□□□ -1.47
SEC20YDR498C INO1P11986 533 aa5.87□□□□□ -1.47
SEC20YDR498C HSP26P15992 214 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SEC20YDR498C MRPL25P23369 157 aa5.87□□□□□ -1.47
SEC20YDR498C HEK2P38199 381 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SEC20YDR498C POA1P38218 177 aa5.87□□□□□ -1.47
SEC20YDR498C OTU2P38747 307 aaKnown RBP5.87□□□□□ -1.47
SEC20YDR498C YHR202WP38887 602 aa5.87□□□□□ -1.47
SEC20YDR498C MEF2P39677 819 aa5.87□□□□□ -1.47
SEC20YDR498C STL1P39932 569 aa5.87□□□□□ -1.47
SEC20YDR498C CHS6P40955 746 aa5.87□□□□□ -1.47
SEC20YDR498C GUF1P46943 645 aa5.87□□□□□ -1.47
SEC20YDR498C PNG1Q02890 363 aa5.87□□□□□ -1.47
SEC20YDR498C SND1Q04007 877 aa5.87□□□□□ -1.47
SEC20YDR498C SPG3Q04398 127 aaPredicted RBP5.87□□□□□ -1.47
SEC20YDR498C ECM22Q05958 814 aaPredicted RBP5.87□□□□□ -1.47
SEC20YDR498C ECM30Q06673 1274 aa5.87□□□□□ -1.47
SEC20YDR498C TPO1Q07824 586 aa5.87□□□□□ -1.47
SEC20YDR498C NRT1Q08485 598 aa5.87□□□□□ -1.47
SEC20YDR498C OCA6Q12454 224 aa5.87□□□□□ -1.47
SEC20YDR498C YMR030W-AQ3E760 96 aa5.87□□□□□ -1.47
SEC20YDR498C CCP1P00431 361 aa5.86□□□□□ -1.47
SEC20YDR498C HEM1P09950 548 aaPredicted RBP5.86□□□□□ -1.47
SEC20YDR498C HSF1P10961 833 aa5.86□□□□□ -1.47
SEC20YDR498C PRP4P20053 465 aaKnown RBP5.86□□□□□ -1.47
SEC20YDR498C SEC14P24280 304 aaKnown RBP5.86□□□□□ -1.47
SEC20YDR498C MVD1P32377 396 aaKnown RBP5.86□□□□□ -1.47
SEC20YDR498C RAD5P32849 1169 aaPredicted RBP5.86□□□□□ -1.47
SEC20YDR498C BEM3P32873 1128 aa5.86□□□□□ -1.47
SEC20YDR498C CYM1P32898 989 aa5.86□□□□□ -1.47
SEC20YDR498C GRS1P38088 690 aaKnown RBP5.86□□□□□ -1.47
SEC20YDR498C LDH1P38139 375 aa5.86□□□□□ -1.47
SEC20YDR498C SHE3P38272 425 aaKnown RBP5.86□□□□□ -1.47
SEC20YDR498C HSM3P38348 480 aa5.86□□□□□ -1.47
SEC20YDR498C IML2P47031 731 aa5.86□□□□□ -1.47
SEC20YDR498C LIA1P47120 325 aaKnown RBP5.86□□□□□ -1.47
SEC20YDR498C FOL2P51601 243 aaKnown RBP5.86□□□□□ -1.47
SEC20YDR498C RTA1P53047 317 aa5.86□□□□□ -1.47
SEC20YDR498C BUD32P53323 261 aa5.86□□□□□ -1.47
SEC20YDR498C ADE12P80210 433 aaKnown RBP5.86□□□□□ -1.47
SEC20YDR498C PIR3Q03180 325 aa5.86□□□□□ -1.47
SEC20YDR498C YML119WQ03208 357 aa5.86□□□□□ -1.47
SEC20YDR498C HER2Q03557 464 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms