RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C HPR1P17629 752 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C AAD3P25612 363 aa3.68□□□□□ -1.82
TRS120YDR407C ADY2P25613 283 aa3.68□□□□□ -1.82
TRS120YDR407C SEC1P30619 724 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C APE2P32454 952 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C SAF1P38352 637 aa3.68□□□□□ -1.82
TRS120YDR407C OTU2P38747 307 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C PRE6P40303 254 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C PET130P47065 347 aa3.68□□□□□ -1.82
TRS120YDR407C YML6P51998 286 aa3.68□□□□□ -1.82
TRS120YDR407C PRO2P54885 456 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C MZM1Q03429 123 aaPredicted RBP3.68□□□□□ -1.82
TRS120YDR407C RSM24Q03976 319 aa3.68□□□□□ -1.82
TRS120YDR407C ERB1Q04660 807 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C RRP15Q06511 250 aaPredicted RBP3.68□□□□□ -1.82
TRS120YDR407C NRT1Q08485 598 aa3.68□□□□□ -1.82
TRS120YDR407C CDC19P00549 500 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C RHO2P06781 192 aa3.68□□□□□ -1.82
TRS120YDR407C HVG1P0CE11 249 aa3.68□□□□□ -1.82
TRS120YDR407C RPS4AP0CX35 261 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C RPS4BP0CX36 261 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C GPA2P10823 449 aa3.68□□□□□ -1.82
TRS120YDR407C DBR1P24309 405 aaKnown RBP3.68□□□□□ -1.82
TRS120YDR407C GID7P25569 745 aa3.68□□□□□ -1.82
TRS120YDR407C MGT1P26188 188 aa3.68□□□□□ -1.82
TRS120YDR407C UTR2P32623 467 aa3.68□□□□□ -1.82
TRS120YDR407C YKR015CP36111 568 aa3.68□□□□□ -1.82
TRS120YDR407C RIB1P38066 345 aa3.68□□□□□ -1.82
TRS120YDR407C PEX31P53203 462 aa3.68□□□□□ -1.82
TRS120YDR407C ATP25Q03153 612 aa3.68□□□□□ -1.82
TRS120YDR407C ACL4Q03771 387 aa3.68□□□□□ -1.82
TRS120YDR407C YPR202WQ08993 238 aa3.68□□□□□ -1.82
TRS120YDR407C HRT3Q12347 344 aa3.68□□□□□ -1.82
TRS120YDR407C RRP36Q12481 300 aaPredicted RBP3.68□□□□□ -1.82
TRS120YDR407C SPT3P06844 337 aa3.67□□□□□ -1.82
TRS120YDR407C POX1P13711 748 aa3.67□□□□□ -1.82
TRS120YDR407C PWP2P25635 923 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C RCN1P36054 211 aa3.67□□□□□ -1.82
TRS120YDR407C ROT2P38138 954 aa3.67□□□□□ -1.82
TRS120YDR407C GND1P38720 489 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C NMD3P38861 518 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C RAD55P38953 406 aa3.67□□□□□ -1.82
TRS120YDR407C SOP4P39543 234 aaPredicted RBP3.67□□□□□ -1.82
TRS120YDR407C RRN7P40992 514 aa3.67□□□□□ -1.82
TRS120YDR407C PSA1P41940 361 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C STB2P46679 850 aa3.67□□□□□ -1.82
TRS120YDR407C RRP17Q04031 235 aaPredicted RBP3.67□□□□□ -1.82
TRS120YDR407C YMR111CQ04461 462 aaPredicted RBP3.67□□□□□ -1.82
TRS120YDR407C PUS5Q06244 254 aa3.67□□□□□ -1.82
TRS120YDR407C ENO1P00924 437 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C CMD1P06787 147 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C MEI4P29467 408 aa3.67□□□□□ -1.82
TRS120YDR407C ATG19P35193 415 aa3.67□□□□□ -1.82
TRS120YDR407C APN2P38207 520 aa3.67□□□□□ -1.82
TRS120YDR407C MUP3P38734 546 aa3.67□□□□□ -1.82
TRS120YDR407C YJR061WP40355 935 aa3.67□□□□□ -1.82
TRS120YDR407C YIL054WP40524 105 aa3.67□□□□□ -1.82
TRS120YDR407C YGR035CP53222 116 aa3.67□□□□□ -1.82
TRS120YDR407C CLD1P53264 445 aa3.67□□□□□ -1.82
TRS120YDR407C SPR6Q01684 191 aa3.67□□□□□ -1.82
TRS120YDR407C SVL3Q03088 825 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C YMR160WQ03823 816 aa3.67□□□□□ -1.82
TRS120YDR407C GPI17Q04080 534 aa3.67□□□□□ -1.82
TRS120YDR407C YOR342CQ12182 319 aa3.67□□□□□ -1.82
TRS120YDR407C ACO1P19414 778 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
TRS120YDR407C PWP1P21304 576 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C SLY1P22213 666 aa3.67□□□□□ -1.82
TRS120YDR407C SPR1P32603 445 aa3.67□□□□□ -1.82
TRS120YDR407C UTP11P34247 250 aaPredicted RBP3.67□□□□□ -1.82
TRS120YDR407C NOP4P37838 685 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C FLR1P38124 548 aa3.67□□□□□ -1.82
TRS120YDR407C IST2P38250 946 aa3.67□□□□□ -1.82
TRS120YDR407C UBX7P38349 436 aa3.67□□□□□ -1.82
TRS120YDR407C GDH3P39708 457 aa3.67□□□□□ -1.82
TRS120YDR407C ECM10P39987 644 aa3.67□□□□□ -1.82
TRS120YDR407C VPS9P54787 451 aa3.67□□□□□ -1.82
TRS120YDR407C SLD5Q03406 294 aa3.67□□□□□ -1.82
TRS120YDR407C DOT1Q04089 582 aaKnown RBP3.67□□□□□ -1.82
TRS120YDR407C GAL83Q04739 417 aa3.67□□□□□ -1.82
TRS120YDR407C HSH49Q99181 213 aaPredicted RBP3.67□□□□□ -1.82
TRS120YDR407C RGS2Q99188 309 aa3.67□□□□□ -1.82
TRS120YDR407C PAB1P04147 577 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
TRS120YDR407C ATR1P13090 542 aa3.66□□□□□ -1.82
TRS120YDR407C SLM5P25345 492 aaKnown RBP3.66□□□□□ -1.82
TRS120YDR407C CYM1P32898 989 aa3.66□□□□□ -1.82
TRS120YDR407C PCS60P38137 543 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
TRS120YDR407C PEX18P38855 283 aa3.66□□□□□ -1.82
TRS120YDR407C MEF2P39677 819 aa3.66□□□□□ -1.82
TRS120YDR407C PEA2P40091 420 aa3.66□□□□□ -1.82
TRS120YDR407C UBP6P43593 499 aaKnown RBP3.66□□□□□ -1.82
TRS120YDR407C INP52P50942 1183 aa3.66□□□□□ -1.82
TRS120YDR407C YGL108CP53139 140 aa3.66□□□□□ -1.82
TRS120YDR407C ERP6P53198 216 aa3.66□□□□□ -1.82
TRS120YDR407C UTP8P53276 713 aaKnown RBP3.66□□□□□ -1.82
TRS120YDR407C ASI2P53895 289 aa3.66□□□□□ -1.82
TRS120YDR407C SLM2P53955 656 aa3.66□□□□□ -1.82
TRS120YDR407C LGE1Q02796 332 aaKnown RBP3.66□□□□□ -1.82
TRS120YDR407C YDR239CQ03780 787 aa3.66□□□□□ -1.82
TRS120YDR407C ARO80Q04052 950 aa3.66□□□□□ -1.82
TRS120YDR407C NCP1P16603 691 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 110.8 ms