RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W RRD2Q12461 358 aa1.76□□□□□ -2.13
CFT1YDR301W MPD2Q99316 277 aa1.76□□□□□ -2.13
CFT1YDR301W PHO84P25297 587 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W MSH1P25846 959 aa1.75□□□□□ -2.13
CFT1YDR301W TPS2P31688 896 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W NIP1P32497 812 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W SCD5P34758 872 aa1.75□□□□□ -2.13
CFT1YDR301W MSG5P38590 489 aa1.75□□□□□ -2.13
CFT1YDR301W DIA4P38705 446 aaPredicted RBP1.75□□□□□ -2.13
CFT1YDR301W CKB2P38930 258 aa1.75□□□□□ -2.13
CFT1YDR301W XDJ1P39102 459 aa1.75□□□□□ -2.13
CFT1YDR301W CIN4P39110 191 aa1.75□□□□□ -2.13
CFT1YDR301W TOF2Q02208 771 aa1.75□□□□□ -2.13
CFT1YDR301W TFB2Q02939 513 aa1.75□□□□□ -2.13
CFT1YDR301W RPN4Q03465 531 aa1.75□□□□□ -2.13
CFT1YDR301W HER2Q03557 464 aa1.75□□□□□ -2.13
CFT1YDR301W ENT5Q03769 411 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W URH1Q04179 340 aa1.75□□□□□ -2.13
CFT1YDR301W YMR114CQ04471 368 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W LCB5Q06147 687 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W CDC73Q06697 393 aa1.75□□□□□ -2.13
CFT1YDR301W AAD4Q07747 329 aa1.75□□□□□ -2.13
CFT1YDR301W NDJ1Q12366 352 aa1.75□□□□□ -2.13
CFT1YDR301W NOP58Q12499 511 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W TOM1Q03280 3268 aa1.75□□□□□ -2.13
CFT1YDR301W AMS1P22855 1083 aa1.75□□□□□ -2.13
CFT1YDR301W PYC2P32327 1180 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W HSL7P38274 827 aa1.75□□□□□ -2.13
CFT1YDR301W YSW1P38280 609 aa1.75□□□□□ -2.13
CFT1YDR301W REI1P38344 393 aaPredicted RBP1.75□□□□□ -2.13
CFT1YDR301W PPE1P38796 400 aa1.75□□□□□ -2.13
CFT1YDR301W YAT2P40017 923 aa1.75□□□□□ -2.13
CFT1YDR301W INA22P40576 216 aa1.75□□□□□ -2.13
CFT1YDR301W SAP185P40856 1058 aa1.75□□□□□ -2.13
CFT1YDR301W YNL320WP42840 284 aa1.75□□□□□ -2.13
CFT1YDR301W ASG7P46993 209 aa1.75□□□□□ -2.13
CFT1YDR301W YML6P51998 286 aa1.75□□□□□ -2.13
CFT1YDR301W RTS3P53289 263 aa1.75□□□□□ -2.13
CFT1YDR301W GND2P53319 492 aa1.75□□□□□ -2.13
CFT1YDR301W PNG1Q02890 363 aa1.75□□□□□ -2.13
CFT1YDR301W THI20Q08224 551 aa1.75□□□□□ -2.13
CFT1YDR301W YOR338WQ99326 363 aa1.75□□□□□ -2.13
CFT1YDR301W SLY1P22213 666 aa1.75□□□□□ -2.13
CFT1YDR301W PPH22P23595 377 aa1.75□□□□□ -2.13
CFT1YDR301W CDC10P25342 322 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W EMC1P25574 760 aa1.75□□□□□ -2.13
CFT1YDR301W KAR4P25583 335 aa1.75□□□□□ -2.13
CFT1YDR301W YCR051WP25631 222 aa1.75□□□□□ -2.13
CFT1YDR301W YIH1P25637 258 aa1.75□□□□□ -2.13
CFT1YDR301W MEI4P29467 408 aa1.75□□□□□ -2.13
CFT1YDR301W KAR9P32526 644 aa1.75□□□□□ -2.13
CFT1YDR301W SGE1P33335 543 aa1.75□□□□□ -2.13
CFT1YDR301W RPC37P36121 282 aa1.75□□□□□ -2.13
CFT1YDR301W DUG2P38149 878 aa1.75□□□□□ -2.13
CFT1YDR301W VHC1P38329 1120 aa1.75□□□□□ -2.13
CFT1YDR301W PEX28P38848 579 aa1.75□□□□□ -2.13
CFT1YDR301W FLC2P39719 783 aa1.75□□□□□ -2.13
CFT1YDR301W SAW1P39735 261 aa1.75□□□□□ -2.13
CFT1YDR301W AVT2P39981 480 aa1.75□□□□□ -2.13
CFT1YDR301W SCC4P40090 624 aa1.75□□□□□ -2.13
CFT1YDR301W KHA1P40309 873 aa1.75□□□□□ -2.13
CFT1YDR301W MDJ2P42834 146 aa1.75□□□□□ -2.13
CFT1YDR301W MIC19P43594 170 aa1.75□□□□□ -2.13
CFT1YDR301W GCD14P46959 383 aaPredicted RBP1.75□□□□□ -2.13
CFT1YDR301W YTP1P53584 459 aa1.75□□□□□ -2.13
CFT1YDR301W NOG2P53742 486 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W TEP1P53916 434 aa1.75□□□□□ -2.13
CFT1YDR301W TGL2P54857 326 aa1.75□□□□□ -2.13
CFT1YDR301W YVH1Q02256 364 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W UTP6Q02354 440 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W RSC2Q06488 889 aa1.75□□□□□ -2.13
CFT1YDR301W YLR001CQ07895 862 aa1.75□□□□□ -2.13
CFT1YDR301W AAD15Q08361 143 aa1.75□□□□□ -2.13
CFT1YDR301W YPQ1Q12010 308 aa1.75□□□□□ -2.13
CFT1YDR301W SLP1Q12232 587 aa1.75□□□□□ -2.13
CFT1YDR301W SFI1Q12369 946 aa1.75□□□□□ -2.13
CFT1YDR301W LPX1Q12405 387 aaKnown RBP1.75□□□□□ -2.13
CFT1YDR301W SPE1P08432 466 aa1.74□□□□□ -2.13
CFT1YDR301W ERR1P0CX10 437 aa1.74□□□□□ -2.13
CFT1YDR301W ERR2P0CX11 437 aa1.74□□□□□ -2.13
CFT1YDR301W GCY1P14065 312 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
CFT1YDR301W LTV1P34078 463 aa1.74□□□□□ -2.13
CFT1YDR301W OLA1P38219 394 aaKnown RBP1.74□□□□□ -2.13
CFT1YDR301W SEO1P39709 593 aa1.74□□□□□ -2.13
CFT1YDR301W YIL161WP40449 235 aaKnown RBP1.74□□□□□ -2.13
CFT1YDR301W QDR1P40475 563 aa1.74□□□□□ -2.13
CFT1YDR301W ERR3P42222 437 aa1.74□□□□□ -2.13
CFT1YDR301W NMD5P46970 1048 aa1.74□□□□□ -2.13
CFT1YDR301W CCT8P47079 568 aaKnown RBP1.74□□□□□ -2.13
CFT1YDR301W YJR079WP47126 109 aa1.74□□□□□ -2.13
CFT1YDR301W RSM26P47141 266 aa1.74□□□□□ -2.13
CFT1YDR301W ARH1P48360 493 aa1.74□□□□□ -2.13
CFT1YDR301W PEX8P53248 589 aa1.74□□□□□ -2.13
CFT1YDR301W TDA7P53882 636 aaPredicted RBP1.74□□□□□ -2.13
CFT1YDR301W KTR6P54070 446 aa1.74□□□□□ -2.13
CFT1YDR301W YDR278CQ05612 105 aa1.74□□□□□ -2.13
CFT1YDR301W PSR1Q07800 427 aa1.74□□□□□ -2.13
CFT1YDR301W CMS1Q07897 291 aaKnown RBP1.74□□□□□ -2.13
CFT1YDR301W TRE2Q08693 809 aa1.74□□□□□ -2.13
CFT1YDR301W YRR1Q12172 810 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms