RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeastyeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUP1YCR084C PNP1Q05788 311 aa5.18□□□□□ -1.58
TUP1YCR084C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
TUP1YCR084C AFT2Q08957 416 aa5.18□□□□□ -1.58
TUP1YCR084C TRM8Q12009 286 aa5.18□□□□□ -1.58
TUP1YCR084C RAD59Q12223 238 aa5.18□□□□□ -1.58
TUP1YCR084C YRF1-2P40105 1681 aa5.18□□□□□ -1.58
TUP1YCR084C PRI2P20457 528 aa5.18□□□□□ -1.58
TUP1YCR084C BAS1P22035 811 aa5.18□□□□□ -1.58
TUP1YCR084C CWH43P25618 953 aa5.18□□□□□ -1.58
TUP1YCR084C SMI1P32566 505 aa5.18□□□□□ -1.58
TUP1YCR084C DUT1P33317 147 aa5.18□□□□□ -1.58
TUP1YCR084C HEK2P38199 381 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
TUP1YCR084C MPT5P39016 859 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
TUP1YCR084C YRB2P40517 327 aa5.18□□□□□ -1.58
TUP1YCR084C ULP2P40537 1034 aaPredicted RBP5.18□□□□□ -1.58
TUP1YCR084C MDV1P47025 714 aa5.18□□□□□ -1.58
TUP1YCR084C HFM1P51979 1187 aa5.18□□□□□ -1.58
TUP1YCR084C LSG1P53145 640 aaKnown RBP5.18□□□□□ -1.58
TUP1YCR084C COG2P53271 262 aa5.18□□□□□ -1.58
TUP1YCR084C IPI3P53877 555 aa5.18□□□□□ -1.58
TUP1YCR084C UGO1Q03327 502 aa5.18□□□□□ -1.58
TUP1YCR084C UTP5Q04177 643 aaKnown RBP5.18□□□□□ -1.58
TUP1YCR084C RBS1Q05672 457 aaKnown RBP5.18□□□□□ -1.58
TUP1YCR084C ATG17Q06410 417 aa5.18□□□□□ -1.58
TUP1YCR084C TDA5Q06417 326 aaKnown RBP5.18□□□□□ -1.58
TUP1YCR084C OPI10Q08202 246 aa5.18□□□□□ -1.58
TUP1YCR084C BUD7Q08754 746 aa5.18□□□□□ -1.58
TUP1YCR084C VIK1Q12045 647 aa5.18□□□□□ -1.58
TUP1YCR084C VPS54Q12071 889 aa5.18□□□□□ -1.58
TUP1YCR084C MATALPHA2P0CY08 210 aa5.17□□□□□ -1.58
TUP1YCR084C HMLALPHA2P0CY09 210 aa5.17□□□□□ -1.58
TUP1YCR084C GFA1P14742 717 aaKnown RBP5.17□□□□□ -1.58
TUP1YCR084C ALG1P16661 449 aa5.17□□□□□ -1.58
TUP1YCR084C FUS3P16892 353 aaKnown RBP5.17□□□□□ -1.58
TUP1YCR084C KGD2P19262 463 aaPredicted RBP5.17□□□□□ -1.58
TUP1YCR084C AMN1P38285 549 aaPredicted RBP5.17□□□□□ -1.58
TUP1YCR084C YEL023CP39992 682 aa5.17□□□□□ -1.58
TUP1YCR084C SCS2P40075 244 aaKnown RBP5.17□□□□□ -1.58
TUP1YCR084C STB1P42845 420 aa5.17□□□□□ -1.58
TUP1YCR084C UBP6P43593 499 aaKnown RBP5.17□□□□□ -1.58
TUP1YCR084C NIT3P49954 291 aa5.17□□□□□ -1.58
TUP1YCR084C STB4P50104 949 aa5.17□□□□□ -1.58
TUP1YCR084C YGR012WP53206 393 aa5.17□□□□□ -1.58
TUP1YCR084C YNR061CP53747 219 aa5.17□□□□□ -1.58
TUP1YCR084C YMR155WQ03795 547 aa5.17□□□□□ -1.58
TUP1YCR084C BSC2Q05611 235 aa5.17□□□□□ -1.58
TUP1YCR084C BOP2Q06150 570 aa5.17□□□□□ -1.58
TUP1YCR084C SIL1Q08199 421 aa5.17□□□□□ -1.58
TUP1YCR084C ENV9Q08651 330 aa5.17□□□□□ -1.58
TUP1YCR084C DSE3Q08729 430 aa5.17□□□□□ -1.58
TUP1YCR084C FAP7Q12055 197 aaPredicted RBP5.17□□□□□ -1.58
TUP1YCR084C DCS2Q12123 353 aa5.17□□□□□ -1.58
TUP1YCR084C RBD2Q12270 262 aa5.17□□□□□ -1.58
TUP1YCR084C ADE3P07245 946 aaKnown RBP5.17□□□□□ -1.58
TUP1YCR084C SCJ1P25303 377 aa5.17□□□□□ -1.58
TUP1YCR084C MKK2P32491 506 aa5.17□□□□□ -1.58
TUP1YCR084C POP7P38291 140 aa5.17□□□□□ -1.58
TUP1YCR084C YHI9P38765 294 aa5.17□□□□□ -1.58
TUP1YCR084C RAD55P38953 406 aa5.17□□□□□ -1.58
TUP1YCR084C SAK1P38990 1142 aa5.17□□□□□ -1.58
TUP1YCR084C SHQ1P40486 507 aaPredicted RBP5.17□□□□□ -1.58
TUP1YCR084C SYG1P40528 902 aa5.17□□□□□ -1.58
TUP1YCR084C BRO1P48582 844 aa5.17□□□□□ -1.58
TUP1YCR084C RTA1P53047 317 aa5.17□□□□□ -1.58
TUP1YCR084C NAF1P53919 492 aaKnown RBP5.17□□□□□ -1.58
TUP1YCR084C MEC3Q02574 474 aa5.17□□□□□ -1.58
TUP1YCR084C YPL071CQ02864 156 aa5.17□□□□□ -1.58
TUP1YCR084C HFD1Q04458 532 aa5.17□□□□□ -1.58
TUP1YCR084C MGR3Q04472 501 aa5.17□□□□□ -1.58
TUP1YCR084C YOL036WQ08206 761 aa5.17□□□□□ -1.58
TUP1YCR084C GIS3Q12418 502 aa5.17□□□□□ -1.58
TUP1YCR084C CMC2Q3E7A4 109 aa5.17□□□□□ -1.58
TUP1YCR084C APC1P53886 1748 aa5.16□□□□□ -1.58
TUP1YCR084C TDH1P00360 332 aaKnown RBP5.16□□□□□ -1.58
TUP1YCR084C BI4P03879 638 aa5.16□□□□□ -1.58
TUP1YCR084C RPS6AP0CX37 236 aaKnown RBP5.16□□□□□ -1.58
TUP1YCR084C RPS6BP0CX38 236 aaPredicted RBP5.16□□□□□ -1.58
TUP1YCR084C PFK2P16862 959 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
TUP1YCR084C APA2P22108 325 aa5.16□□□□□ -1.58
TUP1YCR084C RAD57P25301 460 aa5.16□□□□□ -1.58
TUP1YCR084C RER1P25560 188 aa5.16□□□□□ -1.58
TUP1YCR084C GDH2P33327 1092 aaKnown RBP5.16□□□□□ -1.58
TUP1YCR084C KES1P35844 434 aaKnown RBP5.16□□□□□ -1.58
TUP1YCR084C SHM1P37292 490 aaPredicted RBP5.16□□□□□ -1.58
TUP1YCR084C SPP381P38282 291 aaPredicted RBP5.16□□□□□ -1.58
TUP1YCR084C TDA3P38758 523 aa5.16□□□□□ -1.58
TUP1YCR084C MTG2P38860 518 aa5.16□□□□□ -1.58
TUP1YCR084C VHR1P40522 640 aa5.16□□□□□ -1.58
TUP1YCR084C RMR1P53060 241 aa5.16□□□□□ -1.58
TUP1YCR084C YGR127WP53275 312 aa5.16□□□□□ -1.58
TUP1YCR084C CWC24P53769 259 aa5.16□□□□□ -1.58
TUP1YCR084C ESBP6P53918 673 aa5.16□□□□□ -1.58
TUP1YCR084C YKR005CQ02203 525 aa5.16□□□□□ -1.58
TUP1YCR084C ATP25Q03153 612 aa5.16□□□□□ -1.58
TUP1YCR084C RLI1Q03195 608 aaKnown RBP5.16□□□□□ -1.58
TUP1YCR084C NGL3Q03210 505 aa5.16□□□□□ -1.58
TUP1YCR084C VBA4Q04602 768 aaKnown RBP5.16□□□□□ -1.58
TUP1YCR084C ECM38Q05902 660 aaPredicted RBP5.16□□□□□ -1.58
TUP1YCR084C PDR8Q06149 701 aa5.16□□□□□ -1.58
TUP1YCR084C TAF10Q12030 206 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms