RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDH1	YBR204C	RNR3	P21672	869 aa	Known RBP	4.59	□□□□□ -1.67
LDH1	YBR204C	TRX2	P22803	104 aa	Known RBP	4.59	□□□□□ -1.67
LDH1	YBR204C	YCL049C	P25577	312 aa		4.59	□□□□□ -1.67
LDH1	YBR204C	YBR138C	P38277	524 aa		4.59	□□□□□ -1.67
LDH1	YBR204C	ERR3	P42222	437 aa		4.59	□□□□□ -1.67
LDH1	YBR204C	ESF2	P53743	316 aa	Known RBP	4.59	□□□□□ -1.67
LDH1	YBR204C	GFD1	Q04839	188 aa	Known RBP	4.59	□□□□□ -1.67
LDH1	YBR204C	BLS1	Q06071	122 aa		4.59	□□□□□ -1.67
LDH1	YBR204C	CRT10	Q08226	957 aa		4.59	□□□□□ -1.67
LDH1	YBR204C	OSW1	Q08692	278 aa		4.59	□□□□□ -1.67
LDH1	YBR204C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
LDH1	YBR204C	LEU2	P04173	364 aa	Predicted RBP	4.58	□□□□□ -1.68
LDH1	YBR204C	NCP1	P16603	691 aa	Known RBP	4.58	□□□□□ -1.68
LDH1	YBR204C	CLB4	P24871	460 aa		4.58	□□□□□ -1.68
LDH1	YBR204C	SAT4	P25333	603 aa	Known RBP	4.58	□□□□□ -1.68
LDH1	YBR204C	DPB3	P27344	201 aa		4.58	□□□□□ -1.68
LDH1	YBR204C	UGP1	P32861	499 aa	Known RBP	4.58	□□□□□ -1.68
LDH1	YBR204C	ARC35	P53731	342 aa	Known RBP	4.58	□□□□□ -1.68
LDH1	YBR204C	YNL092W	P53934	400 aa		4.58	□□□□□ -1.68
LDH1	YBR204C	ATG21	Q02887	496 aa		4.58	□□□□□ -1.68
LDH1	YBR204C	ARG7	Q04728	441 aa		4.58	□□□□□ -1.68
LDH1	YBR204C	CRF1	Q04930	467 aa		4.58	□□□□□ -1.68
LDH1	YBR204C	TOP1	P04786	769 aa		4.57	□□□□□ -1.68
LDH1	YBR204C	MTF2	P10849	440 aa		4.57	□□□□□ -1.68
LDH1	YBR204C	PMA2	P19657	947 aa		4.57	□□□□□ -1.68
LDH1	YBR204C	ARP2	P32381	391 aa	Known RBP	4.57	□□□□□ -1.68
LDH1	YBR204C	FSH1	P38777	243 aa	Known RBP	4.57	□□□□□ -1.68
LDH1	YBR204C	FAF1	P40546	346 aa	Predicted RBP	4.57	□□□□□ -1.68
LDH1	YBR204C	YPL108W	Q02872	168 aa	Predicted RBP	4.57	□□□□□ -1.68
LDH1	YBR204C	ULA1	Q12059	462 aa		4.57	□□□□□ -1.68
LDH1	YBR204C	YER175W-A	Q8TGU4	54 aa		4.57	□□□□□ -1.68
LDH1	YBR204C	RPL7A	P05737	244 aa	Known RBP	4.56	□□□□□ -1.68
LDH1	YBR204C	ERG11	P10614	530 aa		4.56	□□□□□ -1.68
LDH1	YBR204C	YMC1	P32331	307 aa		4.56	□□□□□ -1.68
LDH1	YBR204C	EXO84	P38261	753 aa		4.56	□□□□□ -1.68
LDH1	YBR204C	ARO9	P38840	513 aa	Predicted RBP	4.56	□□□□□ -1.68
LDH1	YBR204C	LNP1	P38878	278 aa		4.56	□□□□□ -1.68
LDH1	YBR204C	MRPL13	Q02204	264 aa		4.56	□□□□□ -1.68
LDH1	YBR204C	FMP30	Q02883	468 aa		4.56	□□□□□ -1.68
LDH1	YBR204C	TRS130	Q03660	1102 aa		4.56	□□□□□ -1.68
LDH1	YBR204C	RPL7B	Q12213	244 aa	Known RBP	4.56	□□□□□ -1.68
LDH1	YBR204C	SUL2	Q12325	893 aa		4.56	□□□□□ -1.68
LDH1	YBR204C	PET122	P10355	254 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	KGD2	P19262	463 aa	Predicted RBP	4.55	□□□□□ -1.68
LDH1	YBR204C	PTP1	P25044	335 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	XRS2	P33301	854 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	NPR3	P38742	1146 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	MAM1	P40065	302 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	RAD26	P40352	1085 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	BST1	P43571	1029 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	YFL015C	P43578	164 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	WAR1	Q03631	944 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	PCL8	Q08966	492 aa		4.55	□□□□□ -1.68
LDH1	YBR204C	YMR084W	A2P2R3	262 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	CHO2	P05374	869 aa	Known RBP	4.54	□□□□□ -1.68
LDH1	YBR204C	ADE5,7	P07244	802 aa	Known RBP	4.54	□□□□□ -1.68
LDH1	YBR204C	NUC1	P08466	329 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	UBC1	P21734	215 aa	Known RBP	4.54	□□□□□ -1.68
LDH1	YBR204C	AMD2	P22580	549 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	AAD3	P25612	363 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	MRPL9	P31334	269 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	MRPL36	P36531	177 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	PSF2	P40359	213 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	LAS21	P40367	830 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	SMK1	P41808	388 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	GAT1	P43574	510 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	GTR1	Q00582	310 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	YML119W	Q03208	357 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	YBR255C-A	Q3E776	120 aa		4.54	□□□□□ -1.68
LDH1	YBR204C	SSM4	P40318	1319 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	PDE1	P22434	369 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	SWC3	P31376	625 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	GDA1	P32621	518 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	PSY4	P38193	441 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	VPS8	P39702	1274 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	LTP1	P40347	161 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	OPT1	P40897	799 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	BNA3	P47039	444 aa	Known RBP	4.53	□□□□□ -1.68
LDH1	YBR204C	TAM41	P53230	385 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	UBP16	Q02863	499 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	TFC6	Q06339	672 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	YDL242W	Q07746	117 aa		4.53	□□□□□ -1.68
LDH1	YBR204C	BEM3	P32873	1128 aa		4.52	□□□□□ -1.69
LDH1	YBR204C	MTG2	P38860	518 aa		4.52	□□□□□ -1.69
LDH1	YBR204C	TDA10	P42938	290 aa		4.52	□□□□□ -1.69
LDH1	YBR204C	COG2	P53271	262 aa		4.52	□□□□□ -1.69
LDH1	YBR204C	YML131W	Q03102	365 aa		4.52	□□□□□ -1.69
LDH1	YBR204C	ECM16	Q04217	1267 aa	Known RBP	4.52	□□□□□ -1.69
LDH1	YBR204C	RAD33	Q04231	177 aa		4.52	□□□□□ -1.69
LDH1	YBR204C	LCB4	Q12246	624 aa		4.52	□□□□□ -1.69
LDH1	YBR204C	AHA1	Q12449	350 aa	Known RBP	4.52	□□□□□ -1.69
LDH1	YBR204C	Q0010	Q9ZZX9	128 aa		4.52	□□□□□ -1.69
LDH1	YBR204C	PGK1	P00560	416 aa	Known RBP	4.51	□□□□□ -1.69
LDH1	YBR204C	HEM1	P09950	548 aa	Predicted RBP	4.51	□□□□□ -1.69
LDH1	YBR204C	NUP1	P20676	1076 aa		4.51	□□□□□ -1.69
LDH1	YBR204C	URK1	P27515	501 aa		4.51	□□□□□ -1.69
LDH1	YBR204C	IFA38	P38286	347 aa		4.51	□□□□□ -1.69
LDH1	YBR204C	EXO1	P39875	702 aa		4.51	□□□□□ -1.69
LDH1	YBR204C	SKP2	P42843	763 aa		4.51	□□□□□ -1.69
LDH1	YBR204C	IML2	P47031	731 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms