RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W LRP1P38801 184 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W UTP18P40362 594 aaPredicted RBP2.36□□□□□ -2.03
NUP170YBL079W ELP2P42935 788 aa2.36□□□□□ -2.03
NUP170YBL079W TOS3P43637 560 aa2.36□□□□□ -2.03
NUP170YBL079W RTA1P53047 317 aa2.36□□□□□ -2.03
NUP170YBL079W CDA2Q06703 312 aa2.36□□□□□ -2.03
NUP170YBL079W TPO1Q07824 586 aa2.36□□□□□ -2.03
NUP170YBL079W PGC1Q08959 321 aa2.36□□□□□ -2.03
NUP170YBL079W THI21Q08975 551 aa2.36□□□□□ -2.03
NUP170YBL079W LCB4Q12246 624 aa2.36□□□□□ -2.03
NUP170YBL079W SKM1Q12469 655 aa2.36□□□□□ -2.03
NUP170YBL079W FRT1Q99332 602 aa2.36□□□□□ -2.03
NUP170YBL079W CPA1P07258 411 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W MET18P40469 1032 aa2.36□□□□□ -2.03
NUP170YBL079W MET12P46151 657 aa2.36□□□□□ -2.03
NUP170YBL079W BNA3P47039 444 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W PEX13P80667 386 aa2.36□□□□□ -2.03
NUP170YBL079W SPP382Q06411 708 aaPredicted RBP2.36□□□□□ -2.03
NUP170YBL079W INO1P11986 533 aa2.36□□□□□ -2.03
NUP170YBL079W RNR1P21524 888 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W SEC1P30619 724 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W GCD6P32501 712 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W SRB2P34162 210 aa2.36□□□□□ -2.03
NUP170YBL079W DCW1P36091 449 aa2.36□□□□□ -2.03
NUP170YBL079W BDH2P39713 417 aa2.36□□□□□ -2.03
NUP170YBL079W STL1P39932 569 aa2.36□□□□□ -2.03
NUP170YBL079W SEC28P40509 296 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W PET130P47065 347 aa2.36□□□□□ -2.03
NUP170YBL079W SCS3P53012 380 aa2.36□□□□□ -2.03
NUP170YBL079W DIP5P53388 608 aa2.36□□□□□ -2.03
NUP170YBL079W TDA9Q04545 1251 aa2.36□□□□□ -2.03
NUP170YBL079W VPS68Q12016 184 aa2.36□□□□□ -2.03
NUP170YBL079W SPO24Q3E752 67 aa2.36□□□□□ -2.03
NUP170YBL079W CDC33P07260 213 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W SPS1P08458 490 aa2.36□□□□□ -2.03
NUP170YBL079W CBS2P14905 389 aa2.36□□□□□ -2.03
NUP170YBL079W YJU3P28321 313 aa2.36□□□□□ -2.03
NUP170YBL079W TCA17P32613 152 aa2.36□□□□□ -2.03
NUP170YBL079W CSG2P35206 410 aa2.36□□□□□ -2.03
NUP170YBL079W EMC3P36039 253 aa2.36□□□□□ -2.03
NUP170YBL079W MRPL37P36532 105 aa2.36□□□□□ -2.03
NUP170YBL079W SPF1P39986 1215 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W YJR098CP47139 656 aa2.36□□□□□ -2.03
NUP170YBL079W MRK1P50873 501 aa2.36□□□□□ -2.03
NUP170YBL079W AIM14P53109 570 aa2.36□□□□□ -2.03
NUP170YBL079W IPI3P53877 555 aa2.36□□□□□ -2.03
NUP170YBL079W YMR187CQ03236 431 aa2.36□□□□□ -2.03
NUP170YBL079W ADI1Q03677 179 aa2.36□□□□□ -2.03
NUP170YBL079W HRD3Q05787 833 aa2.36□□□□□ -2.03
NUP170YBL079W DDC1Q08949 612 aa2.36□□□□□ -2.03
NUP170YBL079W COX4P04037 155 aa2.35□□□□□ -2.03
NUP170YBL079W UBA1P22515 1024 aaKnown RBP2.35□□□□□ -2.03
NUP170YBL079W SCJ1P25303 377 aa2.35□□□□□ -2.03
NUP170YBL079W CDC15P27636 974 aa2.35□□□□□ -2.03
NUP170YBL079W RRM3P38766 723 aa2.35□□□□□ -2.03
NUP170YBL079W ARP4P80428 489 aa2.35□□□□□ -2.03
NUP170YBL079W PRP38Q00723 242 aaPredicted RBP2.35□□□□□ -2.03
NUP170YBL079W ATG16Q03818 150 aa2.35□□□□□ -2.03
NUP170YBL079W POB3Q04636 552 aaKnown RBP2.35□□□□□ -2.03
NUP170YBL079W ARP9Q05123 467 aa2.35□□□□□ -2.03
NUP170YBL079W GPM3Q12326 303 aa2.35□□□□□ -2.03
NUP170YBL079W YDR262WQ12331 272 aa2.35□□□□□ -2.03
NUP170YBL079W YEL076C-AP0CX16 216 aa2.35□□□□□ -2.03
NUP170YBL079W YLR464WP0CX17 216 aa2.35□□□□□ -2.03
NUP170YBL079W NPP1P25353 742 aa2.35□□□□□ -2.03
NUP170YBL079W CYM1P32898 989 aa2.35□□□□□ -2.03
NUP170YBL079W RPC37P36121 282 aa2.35□□□□□ -2.03
NUP170YBL079W ADE17P38009 592 aaKnown RBP2.35□□□□□ -2.03
NUP170YBL079W YEL076CP39971 216 aa2.35□□□□□ -2.03
NUP170YBL079W YIR014WP40570 242 aa2.35□□□□□ -2.03
NUP170YBL079W SNZ3P43545 298 aa2.35□□□□□ -2.03
NUP170YBL079W DUG1P43616 481 aaKnown RBP2.35□□□□□ -2.03
NUP170YBL079W ROK1P45818 564 aaPredicted RBP2.35□□□□□ -2.03
NUP170YBL079W SUM1P46676 1062 aa2.35□□□□□ -2.03
NUP170YBL079W AVT1P47082 602 aa2.35□□□□□ -2.03
NUP170YBL079W SNZ2P53824 298 aa2.35□□□□□ -2.03
NUP170YBL079W SNP1Q00916 300 aaPredicted RBP2.35□□□□□ -2.03
NUP170YBL079W SMA1Q02651 245 aa2.35□□□□□ -2.03
NUP170YBL079W YML082WQ04533 649 aaKnown RBP2.35□□□□□ -2.03
NUP170YBL079W IVY1Q04934 453 aa2.35□□□□□ -2.03
NUP170YBL079W IRC13Q08630 104 aa2.35□□□□□ -2.03
NUP170YBL079W LPX1Q12405 387 aaKnown RBP2.35□□□□□ -2.03
NUP170YBL079W ZPS1Q12512 249 aa2.35□□□□□ -2.03
NUP170YBL079W MDM12Q92328 271 aa2.35□□□□□ -2.03
NUP170YBL079W SEC15P22224 910 aa2.35□□□□□ -2.03
NUP170YBL079W TPS2P31688 896 aaKnown RBP2.35□□□□□ -2.03
NUP170YBL079W RIM1P32445 135 aaKnown RBP2.35□□□□□ -2.03
NUP170YBL079W SPR1P32603 445 aa2.35□□□□□ -2.03
NUP170YBL079W SWC5P38326 303 aa2.35□□□□□ -2.03
NUP170YBL079W RGI2P40188 164 aa2.35□□□□□ -2.03
NUP170YBL079W CCT5P40413 562 aaKnown RBP2.35□□□□□ -2.03
NUP170YBL079W IME4P41833 600 aa2.35□□□□□ -2.03
NUP170YBL079W BRE2P43132 505 aa2.35□□□□□ -2.03
NUP170YBL079W CPR7P47103 393 aa2.35□□□□□ -2.03
NUP170YBL079W GCV1P48015 400 aa2.35□□□□□ -2.03
NUP170YBL079W NBP1P52919 319 aaPredicted RBP2.35□□□□□ -2.03
NUP170YBL079W CWC24P53769 259 aa2.35□□□□□ -2.03
NUP170YBL079W YAT1P80235 687 aa2.35□□□□□ -2.03
NUP170YBL079W YPL062WQ02781 134 aa2.35□□□□□ -2.03
NUP170YBL079W VPS60Q03390 229 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms