RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 FMNL1O95466 1100 aaPredicted RBP14.35□□□□□ -0.11
PTPN11-205ENST00000635625 U2AF2P26368 475 aaKnown RBP eCLIP14.35□□□□□ -0.11
PTPN11-205ENST00000635625 SSRP1Q08945 709 aaKnown RBP14.35□□□□□ -0.11
PTPN11-205ENST00000635625 IQCB1Q15051 598 aa14.35□□□□□ -0.11
PTPN11-205ENST00000635625 NTRK3Q16288 839 aa14.35□□□□□ -0.11
PTPN11-205ENST00000635625 TRIM22Q8IYM9 498 aa14.35□□□□□ -0.11
PTPN11-205ENST00000635625 TRIM5Q9C035 493 aa14.35□□□□□ -0.11
PTPN11-205ENST00000635625 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.11
PTPN11-205ENST00000635625 ARMT1Q9H993 441 aa14.35□□□□□ -0.11
PTPN11-205ENST00000635625 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
PTPN11-205ENST00000635625 CACNA1SQ13698 1873 aa14.35□□□□□ -0.11
PTPN11-205ENST00000635625 GNL2Q13823 731 aaKnown RBP14.34□□□□□ -0.11
PTPN11-205ENST00000635625 CAVIN4Q5BKX8 364 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 KRT40Q6A162 431 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 VPS37DQ86XT2 251 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 HS6ST3Q8IZP7 471 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 KIAA1524Q8TCG1 905 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 R3HCC1Q9Y3T6 440 aaKnown RBP14.34□□□□□ -0.11
PTPN11-205ENST00000635625 LAMB1P07942 1786 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 A0A0G2JS52 829 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 BECN2A8MW95 431 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 ONECUT3O60422 494 aaPredicted RBP14.34□□□□□ -0.11
PTPN11-205ENST00000635625 BCAMP50895 628 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 WTAPQ15007 396 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 SAFBQ15424 915 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTPN11-205ENST00000635625 MICU3Q86XE3 530 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 ELOA2Q8IYF1 753 aaPredicted RBP14.34□□□□□ -0.11
PTPN11-205ENST00000635625 SDF4Q9BRK5 362 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 BRIP1Q9BX63 1249 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 TTC12Q9H892 705 aaPredicted RBP14.34□□□□□ -0.11
PTPN11-205ENST00000635625 CLIC4Q9Y696 253 aa14.34□□□□□ -0.11
PTPN11-205ENST00000635625 MORC2Q9Y6X9 1032 aaPredicted RBP14.34□□□□□ -0.11
PTPN11-205ENST00000635625 MAGEB6P1A0A0J9YX57 407 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 DYNC1I1O14576 645 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 RRP9O43818 475 aaKnown RBP14.33□□□□□ -0.12
PTPN11-205ENST00000635625 ATN1P54259 1190 aaPredicted RBP14.33□□□□□ -0.12
PTPN11-205ENST00000635625 TPM4P67936 248 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 LCORLQ8N3X6 602 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 ANKRD2Q9GZV1 360 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.33□□□□□ -0.12
PTPN11-205ENST00000635625 ZSWIM5Q9P217 1185 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 KIAA1468Q9P260 1216 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 STK24Q9Y6E0 443 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 DUOX1Q9NRD9 1551 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 THSD7AQ9UPZ6 1657 aa14.33□□□□□ -0.12
PTPN11-205ENST00000635625 KIF28PB7ZC32 967 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 DEXIO95424 95 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 POLR3DP05423 398 aaPredicted RBP14.32□□□□□ -0.12
PTPN11-205ENST00000635625 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 CYP7A1P22680 504 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 PPARAQ07869 468 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 RTN1Q16799 776 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 DRC7Q8IY82 874 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 ESR2Q92731 530 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 BTAF1O14981 1849 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 CCDC88AQ3V6T2 1871 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 FAM177BA6PVY3 158 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 MYO1BO43795 1136 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 CUTAO60888 179 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 CDC27P30260 824 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 NDUFA8P51970 172 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 AXDND1Q5T1B0 1012 aaPredicted RBP14.32□□□□□ -0.12
PTPN11-205ENST00000635625 FAM182BQ5T319 152 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 MTERF4Q7Z6M4 381 aaKnown RBP14.32□□□□□ -0.12
PTPN11-205ENST00000635625 LINC00116Q8NCU8 138 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 MAP7D2Q96T17 732 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 UBAC1Q9BSL1 405 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 FOXP1Q9H334 677 aaPredicted RBP14.32□□□□□ -0.12
PTPN11-205ENST00000635625 KCNF1Q9H3M0 494 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 FAM217BQ9NTX9 383 aaPredicted RBP14.32□□□□□ -0.12
PTPN11-205ENST00000635625 NARFQ9UHQ1 456 aa14.32□□□□□ -0.12
PTPN11-205ENST00000635625 MYH6P13533 1939 aa14.31□□□□□ -0.12
PTPN11-205ENST00000635625 SLC3A2P08195 630 aaKnown RBP14.31□□□□□ -0.12
PTPN11-205ENST00000635625 CTDSPL2Q05D32 466 aa14.31□□□□□ -0.12
PTPN11-205ENST00000635625 CHAF1AQ13111 956 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-205ENST00000635625 ERFEQ4G0M1 354 aa14.31□□□□□ -0.12
PTPN11-205ENST00000635625 DNTTIP2Q5QJE6 756 aaKnown RBP14.31□□□□□ -0.12
PTPN11-205ENST00000635625 OTUD7BQ6GQQ9 843 aa14.31□□□□□ -0.12
PTPN11-205ENST00000635625 C11orf57Q6ZUT1 292 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-205ENST00000635625 CLIP2Q9UDT6 1046 aa14.31□□□□□ -0.12
PTPN11-205ENST00000635625 LY75O60449 1722 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 A0A1B0GVL5 298 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 SMTNL1A8MU46 457 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
PTPN11-205ENST00000635625 ZNF202O95125 648 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 CALM1P0DP23 149 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 CALM2P0DP24 149 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 CALM3P0DP25 149 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 SPC24Q8NBT2 197 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.3□□□□□ -0.12
PTPN11-205ENST00000635625 RAI14Q9P0K7 980 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 HOOK1Q9UJC3 728 aaKnown RBP14.3□□□□□ -0.12
PTPN11-205ENST00000635625 HPSEQ9Y251 543 aa14.3□□□□□ -0.12
PTPN11-205ENST00000635625 COL1A1P02452 1464 aaPredicted RBP14.3□□□□□ -0.12
PTPN11-205ENST00000635625 UQCRHLA0A096LP55 91 aa14.29□□□□□ -0.12
PTPN11-205ENST00000635625 RPS6KA4O75676 772 aa14.29□□□□□ -0.12
PTPN11-205ENST00000635625 MMP1P03956 469 aa14.29□□□□□ -0.12
PTPN11-205ENST00000635625 UQCRHP07919 91 aa14.29□□□□□ -0.12
PTPN11-205ENST00000635625 FGRP09769 529 aa14.29□□□□□ -0.12
PTPN11-205ENST00000635625 PFKFB1P16118 471 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms