RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 TSPY3P0CV98 308 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 TSPY8P0CW00 308 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 RCAN1P53805 252 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 TMED8Q6PL24 325 aaPredicted RBP11.34□□□□□ -0.59
CDH23-213ENST00000619887 CABP5Q9NP86 173 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 ARPP21Q9UBL0 812 aaPredicted RBP11.34□□□□□ -0.59
CDH23-213ENST00000619887 TNKSO95271 1327 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 FBXL16Q8N461 479 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 STAG1Q8WVM7 1258 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 FOXP1Q9H334 677 aaPredicted RBP11.34□□□□□ -0.59
CDH23-213ENST00000619887 SCN11AQ9UI33 1791 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 NAP1L1P55209 391 aaKnown RBP11.34□□□□□ -0.59
CDH23-213ENST00000619887 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 MLKLQ8NB16 471 aa11.34□□□□□ -0.59
CDH23-213ENST00000619887 AFDNP55196 1824 aaKnown RBP11.34□□□□□ -0.59
CDH23-213ENST00000619887 TRAPPC3LQ5T215 181 aa11.33□□□□□ -0.59
CDH23-213ENST00000619887 SGMS1Q86VZ5 419 aa11.33□□□□□ -0.59
CDH23-213ENST00000619887 CTAGE1Q96RT6 745 aa11.33□□□□□ -0.59
CDH23-213ENST00000619887 ZSCAN10Q96SZ4 725 aaPredicted RBP11.33□□□□□ -0.59
CDH23-213ENST00000619887 RNF26Q9BY78 433 aaPredicted RBP11.33□□□□□ -0.59
CDH23-213ENST00000619887 ZSWIM5Q9P217 1185 aa11.33□□□□□ -0.59
CDH23-213ENST00000619887 TRPM3Q9HCF6 1732 aaPredicted RBP11.33□□□□□ -0.6
CDH23-213ENST00000619887 KRT18P05783 430 aaKnown RBP11.33□□□□□ -0.6
CDH23-213ENST00000619887 SPAG1Q07617 926 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 SARM1Q6SZW1 724 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 FERMT2Q96AC1 680 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
CDH23-213ENST00000619887 PNPLA7Q6ZV29 1317 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 DDAH1O94760 285 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 NT5C2P49902 561 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 CNBD1Q8NA66 436 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 KIAA1524Q8TCG1 905 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 DHX58Q96C10 678 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDH23-213ENST00000619887 CGNQ9P2M7 1197 aaKnown RBP11.33□□□□□ -0.6
CDH23-213ENST00000619887 KCNJ14Q9UNX9 436 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 A0A0U1RQG5 324 aaPredicted RBP11.33□□□□□ -0.6
CDH23-213ENST00000619887 FANCCQ00597 558 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 SDR42E1Q8WUS8 393 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 STX8Q9UNK0 236 aa11.33□□□□□ -0.6
CDH23-213ENST00000619887 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
CDH23-213ENST00000619887 UBA7P41226 1012 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 IQUBQ8NA54 791 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 ATP8A2Q9NTI2 1148 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
CDH23-213ENST00000619887 BCL9O00512 1426 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 CTDNEP1O95476 244 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 C11orf57Q6ZUT1 292 aaPredicted RBP11.32□□□□□ -0.6
CDH23-213ENST00000619887 CYB5R4Q7L1T6 521 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 C17orf53Q8N3J3 647 aaPredicted RBP11.32□□□□□ -0.6
CDH23-213ENST00000619887 CRACR2BQ8N4Y2 399 aaPredicted RBP11.32□□□□□ -0.6
CDH23-213ENST00000619887 TCP11L1Q9NUJ3 509 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 ZNHIT6Q9NWK9 470 aaKnown RBP11.32□□□□□ -0.6
CDH23-213ENST00000619887 AATFQ9NY61 560 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDH23-213ENST00000619887 EVCP57679 992 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 POSTNQ15063 836 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 RAB34Q9BZG1 259 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 ALS2Q96Q42 1657 aa11.32□□□□□ -0.6
CDH23-213ENST00000619887 BTBD18B2RXH4 712 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 USP17L12C9JPN9 530 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 USP17L21D6R901 530 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 POLR2DO15514 142 aaKnown RBP11.31□□□□□ -0.6
CDH23-213ENST00000619887 PRKAB2O43741 272 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 PRDM1O75626 825 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 EPS15P42566 896 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 GPS2Q13227 327 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 KRBA2Q6ZNG9 492 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 ZNF622Q969S3 477 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDH23-213ENST00000619887 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 NEDD4P46934 1319 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 MMP1P03956 469 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 AFMP43652 599 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 FMR1NBQ8N0W7 255 aaPredicted RBP11.31□□□□□ -0.6
CDH23-213ENST00000619887 TRIML1Q8N9V2 468 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 FUCA2Q9BTY2 467 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 TFCP2L1Q9NZI6 479 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 TNS2Q63HR2 1409 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 SPATA31A1Q5TZJ5 1347 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 IKBKBO14920 756 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 TTC38Q5R3I4 469 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 BRIP1Q9BX63 1249 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 JAG2Q9Y219 1238 aa11.31□□□□□ -0.6
CDH23-213ENST00000619887 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 ANTXR2P58335 489 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 TMEM266Q2M3C6 531 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 CCDC70Q6NSX1 233 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 UBXN4Q92575 508 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 ERCC4Q92889 916 aaPredicted RBP11.3□□□□□ -0.6
CDH23-213ENST00000619887 GTPBP4Q9BZE4 634 aaKnown RBP11.3□□□□□ -0.6
CDH23-213ENST00000619887 GOLPH3LQ9H4A5 285 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 PYCARDQ9ULZ3 195 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 GSG1L2A8MUP6 293 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 AMPD3Q01432 767 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 XPO4Q9C0E2 1151 aaKnown RBP11.3□□□□□ -0.6
CDH23-213ENST00000619887 RGPD5Q99666 1765 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 ZNF804BA4D1E1 1349 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 STAT6P42226 847 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms