RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 TMC1Q8TDI8 760 aa10.46□□□□□ -0.73
CBWD1-228ENST00000619157 CARD10Q9BWT7 1032 aa10.46□□□□□ -0.73
CBWD1-228ENST00000619157 NFAT5O94916 1531 aa10.46□□□□□ -0.74
CBWD1-228ENST00000619157 USP54Q70EL1 1684 aa10.46□□□□□ -0.74
CBWD1-228ENST00000619157 COL18A1P39060 1754 aa10.45□□□□□ -0.74
CBWD1-228ENST00000619157 MYOM1P52179 1685 aa10.45□□□□□ -0.74
CBWD1-228ENST00000619157 USP31Q70CQ4 1352 aa10.45□□□□□ -0.74
CBWD1-228ENST00000619157 SPATA31A5Q5VU36 1347 aa10.45□□□□□ -0.74
CBWD1-228ENST00000619157 SPATA31A7Q8IWB4 1347 aa10.45□□□□□ -0.74
CBWD1-228ENST00000619157 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
CBWD1-228ENST00000619157 DHX15O43143 795 aaKnown RBP10.45□□□□□ -0.74
CBWD1-228ENST00000619157 ADAMTS4O75173 837 aa10.45□□□□□ -0.74
CBWD1-228ENST00000619157 COL13A1Q5TAT6 717 aaPredicted RBP10.45□□□□□ -0.74
CBWD1-228ENST00000619157 NME9Q86XW9 330 aa10.45□□□□□ -0.74
CBWD1-228ENST00000619157 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.45□□□□□ -0.74
CBWD1-228ENST00000619157 ETFBKMTQ8IXQ9 262 aa10.45□□□□□ -0.74
CBWD1-228ENST00000619157 OVOS2A0A0J9YW53 1432 aa10.44□□□□□ -0.74
CBWD1-228ENST00000619157 OVOS2Q6IE36 1432 aa10.44□□□□□ -0.74
CBWD1-228ENST00000619157 EDC4Q6P2E9 1401 aaKnown RBP10.44□□□□□ -0.74
CBWD1-228ENST00000619157 ZDHHC13Q8IUH4 622 aa10.44□□□□□ -0.74
CBWD1-228ENST00000619157 UTP4Q969X6 686 aaKnown RBP10.44□□□□□ -0.74
CBWD1-228ENST00000619157 FMNL2Q96PY5 1086 aa10.44□□□□□ -0.74
CBWD1-228ENST00000619157 BRWD3Q6RI45 1802 aa10.44□□□□□ -0.74
CBWD1-228ENST00000619157 THSD7AQ9UPZ6 1657 aa10.44□□□□□ -0.74
CBWD1-228ENST00000619157 COL5A2P05997 1499 aaPredicted RBP10.43□□□□□ -0.74
CBWD1-228ENST00000619157 SPATA31A1Q5TZJ5 1347 aa10.43□□□□□ -0.74
CBWD1-228ENST00000619157 PRKCSHP14314 528 aaPredicted RBP10.43□□□□□ -0.74
CBWD1-228ENST00000619157 CD68P34810 354 aaPredicted RBP10.43□□□□□ -0.74
CBWD1-228ENST00000619157 CDCA8Q53HL2 280 aa10.43□□□□□ -0.74
CBWD1-228ENST00000619157 FAM26DQ5JW98 314 aa10.43□□□□□ -0.74
CBWD1-228ENST00000619157 CEP135Q66GS9 1140 aa10.43□□□□□ -0.74
CBWD1-228ENST00000619157 TRIM42Q8IWZ5 723 aa10.43□□□□□ -0.74
CBWD1-228ENST00000619157 FAM200AQ8TCP9 573 aa10.43□□□□□ -0.74
CBWD1-228ENST00000619157 PRIMPOLQ96LW4 560 aa10.43□□□□□ -0.74
CBWD1-228ENST00000619157 SAP130Q9H0E3 1048 aa10.43□□□□□ -0.74
CBWD1-228ENST00000619157 C7orf69Q9H7B7 122 aa10.43□□□□□ -0.74
CBWD1-228ENST00000619157 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.43□□□□□ -0.74
CBWD1-228ENST00000619157 ANKRD36BQ8N2N9 1353 aa10.42□□□□□ -0.74
CBWD1-228ENST00000619157 NINLQ9Y2I6 1382 aa10.42□□□□□ -0.74
CBWD1-228ENST00000619157 HSPA5P11021 654 aaKnown RBP10.42□□□□□ -0.74
CBWD1-228ENST00000619157 TMF1P82094 1093 aa10.42□□□□□ -0.74
CBWD1-228ENST00000619157 NFIAQ12857 509 aa10.42□□□□□ -0.74
CBWD1-228ENST00000619157 ADAMTSL4Q6UY14 1074 aa10.42□□□□□ -0.74
CBWD1-228ENST00000619157 ARHGEF25Q86VW2 580 aa10.42□□□□□ -0.74
CBWD1-228ENST00000619157 MUC3BQ9H195 1237 aa10.42□□□□□ -0.74
CBWD1-228ENST00000619157 AATKQ6ZMQ8 1374 aa10.41□□□□□ -0.74
CBWD1-228ENST00000619157 HMX2A2RU54 273 aa10.41□□□□□ -0.74
CBWD1-228ENST00000619157 HDGFL2Q7Z4V5 671 aaPredicted RBP10.41□□□□□ -0.74
CBWD1-228ENST00000619157 CEP41Q9BYV8 373 aa10.41□□□□□ -0.74
CBWD1-228ENST00000619157 CCDC9Q9Y3X0 531 aaKnown RBP10.41□□□□□ -0.74
CBWD1-228ENST00000619157 FBLN1P23142 703 aa10.4□□□□□ -0.74
CBWD1-228ENST00000619157 TERF2IPQ9NYB0 399 aa10.4□□□□□ -0.74
CBWD1-228ENST00000619157 RNF114Q9Y508 228 aa10.4□□□□□ -0.74
CBWD1-228ENST00000619157 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
CBWD1-228ENST00000619157 DDX3YO15523 660 aaKnown RBP10.39□□□□□ -0.75
CBWD1-228ENST00000619157 PRMT3O60678 531 aa10.39□□□□□ -0.75
CBWD1-228ENST00000619157 SPINK2P20155 84 aa10.39□□□□□ -0.75
CBWD1-228ENST00000619157 CDC27P30260 824 aa10.39□□□□□ -0.75
CBWD1-228ENST00000619157 KIAA1211Q6ZU35 1233 aa10.39□□□□□ -0.75
CBWD1-228ENST00000619157 OR13H1Q8NG92 308 aa10.39□□□□□ -0.75
CBWD1-228ENST00000619157 UBASH3BQ8TF42 649 aa10.39□□□□□ -0.75
CBWD1-228ENST00000619157 RASSF4Q9H2L5 321 aa10.39□□□□□ -0.75
CBWD1-228ENST00000619157 A6NJR5 290 aa10.38□□□□□ -0.75
CBWD1-228ENST00000619157 YBX3P16989 372 aaKnown RBP eCLIP10.38□□□□□ -0.75
CBWD1-228ENST00000619157 HYAL2Q12891 473 aa10.38□□□□□ -0.75
CBWD1-228ENST00000619157 CACTIN-AS1Q8N1I8 211 aa10.38□□□□□ -0.75
CBWD1-228ENST00000619157 FAM46AQ96IP4 442 aaKnown RBP10.38□□□□□ -0.75
CBWD1-228ENST00000619157 RGPD5Q99666 1765 aa10.38□□□□□ -0.75
CBWD1-228ENST00000619157 TM4SF5O14894 197 aa10.37□□□□□ -0.75
CBWD1-228ENST00000619157 FYB1O15117 783 aa10.37□□□□□ -0.75
CBWD1-228ENST00000619157 SMNDC1O75940 238 aaKnown RBP eCLIP10.37□□□□□ -0.75
CBWD1-228ENST00000619157 GRIK1P39086 918 aa10.37□□□□□ -0.75
CBWD1-228ENST00000619157 CRB1P82279 1406 aa10.37□□□□□ -0.75
CBWD1-228ENST00000619157 DUOXA2Q1HG44 320 aa10.37□□□□□ -0.75
CBWD1-228ENST00000619157 KCNH5Q8NCM2 988 aa10.37□□□□□ -0.75
CBWD1-228ENST00000619157 FOXD4L4Q8WXT5 416 aaPredicted RBP10.37□□□□□ -0.75
CBWD1-228ENST00000619157 SPACA7Q96KW9 195 aa10.37□□□□□ -0.75
CBWD1-228ENST00000619157 USP35Q9P2H5 1018 aa10.37□□□□□ -0.75
CBWD1-228ENST00000619157 SRCAPQ6ZRS2 3230 aa10.37□□□□□ -0.75
CBWD1-228ENST00000619157 PRR19A6NJB7 356 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 FSCN2O14926 492 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 ADAM11O75078 769 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 EPHA1P21709 976 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 SCNN1AP37088 669 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 UVSSAQ2YD98 709 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 RNF43Q68DV7 783 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 KRT27Q7Z3Y8 459 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 MYRFLQ96LU7 910 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 DBNDD2Q9BQY9 259 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 SH2B1Q9NRF2 756 aaPredicted RBP10.36□□□□□ -0.75
CBWD1-228ENST00000619157 NOVA2Q9UNW9 492 aaKnown RBP10.36□□□□□ -0.75
CBWD1-228ENST00000619157 ABCC6O95255 1503 aa10.36□□□□□ -0.75
CBWD1-228ENST00000619157 WDR17Q8IZU2 1322 aa10.35□□□□□ -0.75
CBWD1-228ENST00000619157 DISP2A7MBM2 1401 aa10.35□□□□□ -0.75
CBWD1-228ENST00000619157 NSD3Q9BZ95 1437 aa10.35□□□□□ -0.75
CBWD1-228ENST00000619157 LTN1O94822 1766 aa10.35□□□□□ -0.75
CBWD1-228ENST00000619157 RFX1P22670 979 aa10.35□□□□□ -0.75
CBWD1-228ENST00000619157 BRD2P25440 801 aaKnown RBP10.35□□□□□ -0.75
CBWD1-228ENST00000619157 EVA1CP58658 441 aa10.35□□□□□ -0.75
CBWD1-228ENST00000619157 C16orf46Q6P387 395 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms