RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 STRN4Q9NRL3 753 aa9.13□□□□□ -0.95
CHD7-212ENST00000618450 BAZ2AQ9UIF9 1905 aaKnown RBP9.13□□□□□ -0.95
CHD7-212ENST00000618450 IFNAR1P17181 557 aa9.13□□□□□ -0.95
CHD7-212ENST00000618450 RASGRP2Q7LDG7 609 aa9.13□□□□□ -0.95
CHD7-212ENST00000618450 TTLL11Q8NHH1 800 aa9.13□□□□□ -0.95
CHD7-212ENST00000618450 CHMP4CQ96CF2 233 aa9.13□□□□□ -0.95
CHD7-212ENST00000618450 MTRQ99707 1265 aa9.13□□□□□ -0.95
CHD7-212ENST00000618450 PARD6BQ9BYG5 372 aa9.13□□□□□ -0.95
CHD7-212ENST00000618450 KCNH3Q9ULD8 1083 aa9.13□□□□□ -0.95
CHD7-212ENST00000618450 COL5A3P25940 1745 aaPredicted RBP9.12□□□□□ -0.95
CHD7-212ENST00000618450 EARS2Q5JPH6 523 aaKnown RBP9.12□□□□□ -0.95
CHD7-212ENST00000618450 ISM2Q6H9L7 571 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 RAPGEF4Q8WZA2 1011 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 DDX17Q92841 729 aaKnown RBP9.12□□□□□ -0.95
CHD7-212ENST00000618450 NEUROD6Q96NK8 337 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 PANX2Q96RD6 677 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 IRX2Q9BZI1 471 aaPredicted RBP9.12□□□□□ -0.95
CHD7-212ENST00000618450 BCL11BQ9C0K0 894 aaPredicted RBP9.12□□□□□ -0.95
CHD7-212ENST00000618450 ZSWIM5Q9P217 1185 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 ADD3Q9UEY8 706 aaKnown RBP9.12□□□□□ -0.95
CHD7-212ENST00000618450 SMC2O95347 1197 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 ARHGAP25P42331 645 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 PKN1Q16512 942 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 HSP90AB3PQ58FF7 597 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 SLC9C2Q5TAH2 1124 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 DHX16O60231 1041 aaKnown RBP9.12□□□□□ -0.95
CHD7-212ENST00000618450 RPS6KA5O75582 802 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 SPECC1LQ69YQ0 1117 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 RAB11FIP4Q86YS3 637 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 NOSTRINQ8IVI9 506 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 ZBTB38Q8NAP3 1195 aaPredicted RBP9.12□□□□□ -0.95
CHD7-212ENST00000618450 RABGGTAQ92696 567 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 SLC4A9Q96Q91 983 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 ALG1Q9BT22 464 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 ADGRG1Q9Y653 693 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 ATAD5Q96QE3 1844 aa9.12□□□□□ -0.95
CHD7-212ENST00000618450 ZNF831Q5JPB2 1677 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 COL1A1P02452 1464 aaPredicted RBP9.11□□□□□ -0.95
CHD7-212ENST00000618450 E2F4Q16254 413 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 DHX58Q96C10 678 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 NOL10Q9BSC4 688 aaKnown RBP9.11□□□□□ -0.95
CHD7-212ENST00000618450 L1RE1Q9UN81 338 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 SRPRBQ9Y5M8 271 aaKnown RBP9.11□□□□□ -0.95
CHD7-212ENST00000618450 DDX60LQ5H9U9 1706 aaKnown RBP9.11□□□□□ -0.95
CHD7-212ENST00000618450 CDK5RAP2Q96SN8 1893 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 TEX33O43247 280 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 SEC23AQ15436 765 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 CT47A1Q5JQC4 288 aaPredicted RBP9.11□□□□□ -0.95
CHD7-212ENST00000618450 FBXW7Q969H0 707 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 TMEM87BQ96K49 555 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 PNKPQ96T60 521 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 FOXP1Q9H334 677 aaPredicted RBP9.11□□□□□ -0.95
CHD7-212ENST00000618450 SAMSN1Q9NSI8 373 aaKnown RBP9.11□□□□□ -0.95
CHD7-212ENST00000618450 MYH14Q7Z406 1995 aaKnown RBP9.11□□□□□ -0.95
CHD7-212ENST00000618450 SBF2Q86WG5 1849 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 GSG1L2A8MUP6 293 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 TRIML1Q8N9V2 468 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 TAF1P21675 1872 aa9.11□□□□□ -0.95
CHD7-212ENST00000618450 ZNF213O14771 459 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 FGRP09769 529 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 RCAN1P53805 252 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 ZNF771Q7L3S4 317 aaPredicted RBP9.1□□□□□ -0.95
CHD7-212ENST00000618450 BAG1Q99933 345 aaPredicted RBP9.1□□□□□ -0.95
CHD7-212ENST00000618450 WWC3Q9ULE0 1092 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 MAST2Q6P0Q8 1798 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 ITIH6Q6UXX5 1313 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 ADKP55263 362 aaKnown RBP9.1□□□□□ -0.95
CHD7-212ENST00000618450 POSTNQ15063 836 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 MTA3Q9BTC8 594 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 REXO2Q9Y3B8 237 aaKnown RBP9.1□□□□□ -0.95
CHD7-212ENST00000618450 PCDHB6Q9Y5E3 794 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 GYPCP04921 128 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 ERCC5P28715 1186 aaPredicted RBP9.1□□□□□ -0.95
CHD7-212ENST00000618450 FEZ2Q9UHY8 353 aaPredicted RBP9.1□□□□□ -0.95
CHD7-212ENST00000618450 BTBD18B2RXH4 712 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 ADAMTS3O15072 1205 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 CCP110O43303 1012 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 TFRCP02786 760 aaKnown RBP9.1□□□□□ -0.95
CHD7-212ENST00000618450 RXRAP19793 462 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 IL17AQ16552 155 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 GRAMD1CQ8IYS0 662 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 MLKLQ8NB16 471 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 OXER1Q8TDS5 423 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 STAG1Q8WVM7 1258 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 AKAP2Q9Y2D5 859 aa9.1□□□□□ -0.95
CHD7-212ENST00000618450 PCDH11XQ9BZA7 1347 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 PCDH11YQ9BZA8 1340 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 CCDC151A5D8V7 595 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 SOWAHDA6NJG2 315 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 TXLNAP40222 546 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 METAP2P50579 478 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHD7-212ENST00000618450 CABP4P57796 275 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 FKBP4Q02790 459 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHD7-212ENST00000618450 RAD51AP2Q09MP3 1159 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 CRACR2BQ8N4Y2 399 aaPredicted RBP9.09□□□□□ -0.95
CHD7-212ENST00000618450 KRI1Q8N9T8 703 aaKnown RBP9.09□□□□□ -0.95
CHD7-212ENST00000618450 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 LCMT1Q9UIC8 334 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 CBFA2T2O43439 604 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms