RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 RRP1BQ14684 758 aaKnown RBP16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 TREML2Q5T2D2 321 aa16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 SMCR8Q8TEV9 937 aaPredicted RBP16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 SHISA4Q96DD7 197 aa16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 RNF208Q9H0X6 261 aa16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 C1orf115Q9H7X2 142 aa16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 AGTPBP1Q9UPW5 1226 aa16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 BRCA2P51587 3418 aa16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 MGAMO43451 1857 aa16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 PTPRFP10586 1907 aa16.43■□□□□ 0.22
POLR2J3-219ENST00000608621 BAG3O95817 575 aa16.43■□□□□ 0.22
POLR2J3-219ENST00000608621 CYP2E1P05181 493 aaPredicted RBP16.43■□□□□ 0.22
POLR2J3-219ENST00000608621 GJB1P08034 283 aa16.43■□□□□ 0.22
POLR2J3-219ENST00000608621 FLT3LGP49771 235 aa16.43■□□□□ 0.22
POLR2J3-219ENST00000608621 ZNF280CQ8ND82 737 aa16.43■□□□□ 0.22
POLR2J3-219ENST00000608621 NKX2-3Q8TAU0 364 aa16.43■□□□□ 0.22
POLR2J3-219ENST00000608621 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
POLR2J3-219ENST00000608621 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 TNPO2O14787 897 aaKnown RBP16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 ADCY3O60266 1144 aa16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 GJA8P48165 433 aa16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 PPP4CP60510 307 aa16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 HNRNPUQ00839 825 aaKnown RBP eCLIP16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 ANKRD13CQ8N6S4 541 aa16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 SLAIN1Q8ND83 568 aa16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 HERC5Q9UII4 1024 aaKnown RBP16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
POLR2J3-219ENST00000608621 ZBTB7BO15156 539 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 ZAP70P43403 619 aa16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 HMGCS2P54868 508 aa16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 TGFBRAP1Q8WUH2 860 aa16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 TBC1D2Q9BYX2 928 aa16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 DHX36Q9H2U1 1008 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 COLQQ9Y215 455 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 NOP58Q9Y2X3 529 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-219ENST00000608621 H0YGN5 161 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 RLBP1P12271 317 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 ELNP15502 786 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 PLCG2P16885 1265 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 ADGRA1Q86SQ6 560 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 FOXP4Q8IVH2 680 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 MAPKAPK5Q8IW41 473 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 FTSJ3Q8IY81 847 aaKnown RBP16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 DPF3Q92784 378 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 COA7Q96BR5 231 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 CCDC8Q9H0W5 538 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 UNC93B1Q9H1C4 597 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 DOCK3Q8IZD9 2030 aa16.4■□□□□ 0.22
POLR2J3-219ENST00000608621 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 IRF5Q13568 498 aa16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 FAM110CQ1W6H9 321 aa16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 SH3D19Q5HYK7 790 aa16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 MIER1Q8N108 512 aa16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 PXYLP1Q8TE99 480 aa16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 U2AF1L4Q8WU68 220 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 AS3MTQ9HBK9 375 aa16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 PIH1D3Q9NQM4 214 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
POLR2J3-219ENST00000608621 CEP290O15078 2479 aa16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 SGPL1O95470 568 aa16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 INHAP05111 366 aa16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 DYNLL1P63167 89 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 JAG1P78504 1218 aa16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 UBE2Q1Q7Z7E8 422 aa16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 ASCC2Q9H1I8 757 aaPredicted RBP16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 TLR7Q9NYK1 1049 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
POLR2J3-219ENST00000608621 MYO5AQ9Y4I1 1855 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-219ENST00000608621 IGSF3O75054 1194 aa16.37■□□□□ 0.21
POLR2J3-219ENST00000608621 CYP7A1P22680 504 aa16.37■□□□□ 0.21
POLR2J3-219ENST00000608621 METTL16Q86W50 562 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-219ENST00000608621 CRACR2BQ8N4Y2 399 aaPredicted RBP16.37■□□□□ 0.21
POLR2J3-219ENST00000608621 TRIM34Q9BYJ4 488 aa16.37■□□□□ 0.21
POLR2J3-219ENST00000608621 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
POLR2J3-219ENST00000608621 ATAD5Q96QE3 1844 aa16.37■□□□□ 0.21
POLR2J3-219ENST00000608621 FLT1P17948 1338 aa16.37■□□□□ 0.21
POLR2J3-219ENST00000608621 ASNSP08243 561 aa16.36■□□□□ 0.21
POLR2J3-219ENST00000608621 FXR1P51114 621 aaKnown RBP eCLIP16.36■□□□□ 0.21
POLR2J3-219ENST00000608621 BACE1P56817 501 aa16.36■□□□□ 0.21
POLR2J3-219ENST00000608621 HTATIP2Q9BUP3 242 aa16.36■□□□□ 0.21
POLR2J3-219ENST00000608621 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-219ENST00000608621 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 GDF11O95390 407 aa16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 TFRCP02786 760 aaKnown RBP16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 MTMR2Q13614 643 aa16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 SHROOM1Q2M3G4 852 aaPredicted RBP16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 CEP85Q6P2H3 762 aa16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 DEFB118Q96PH6 123 aa16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 P2RX7Q99572 595 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms