RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 KIF4AO95239 1232 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 PDGFRBP09619 1106 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 SPINK2P20155 84 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 CD68P34810 354 aaPredicted RBP5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 ETFBP38117 255 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 ST13P50502 369 aaKnown RBP5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 NFIAQ12857 509 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 HYAL2Q12891 473 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 RASA3Q14644 834 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 KIAA0319Q5VV43 1072 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 ANKS3Q6ZW76 656 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 AGGF1Q8N302 714 aaeCLIP5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 PMM1Q92871 262 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 UBL7Q96S82 380 aaPredicted RBP5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 DBNDD2Q9BQY9 259 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 KANSL2Q9H9L4 492 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 SNTG2Q9NY99 539 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 GABBR1Q9UBS5 961 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 TRIM33Q9UPN9 1127 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 RNF114Q9Y508 228 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 KDM5BQ9UGL1 1544 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 PTPRMP28827 1452 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 EREGO14944 169 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 SMNDC1O75940 238 aaKnown RBP eCLIP5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 MED26O95402 600 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 S100BP04271 92 aaPredicted RBP5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 SSBP05455 408 aaKnown RBP eCLIP5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 GSTT1P30711 240 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 RAB33AQ14088 237 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 RNF43Q68DV7 783 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 PRPF40BQ6NWY9 871 aaKnown RBP5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 FAM117BQ6P1L5 589 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 PI16Q6UXB8 463 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 CD109Q6YHK3 1445 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 ACAD11Q709F0 780 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 ARMC10Q8N2F6 343 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 KLHL23Q8NBE8 558 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 EPS8L3Q8TE67 593 aaKnown RBP5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 ANKRD24Q8TF21 1146 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 UTP4Q969X6 686 aaKnown RBP5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 CNTN3Q9P232 1028 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 SALL4Q9UJQ4 1053 aa5.27□□□□□ -1.57
IGHV3-29-201ENST00000604817 GADD45BO75293 160 aaPredicted RBP5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 CDC27P30260 824 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 USPL1Q5W0Q7 1092 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 LRP10Q7Z4F1 713 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 NCAPG2Q86XI2 1143 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 DTX1Q86Y01 620 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 FMNL3Q8IVF7 1028 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 FAM46AQ96IP4 442 aaKnown RBP5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 MYRFLQ96LU7 910 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 DEPDC7Q96QD5 511 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 BCO2Q9BYV7 579 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 TMX1Q9H3N1 280 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 C7orf69Q9H7B7 122 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 TYW1Q9NV66 732 aaKnown RBP5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 FANCLQ9NW38 375 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 PPM1HQ9ULR3 514 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 MAGI3Q5TCQ9 1506 aa5.26□□□□□ -1.57
IGHV3-29-201ENST00000604817 ADAMTSL3P82987 1691 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 LINC01387J3KSC0 135 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 CDC45O75419 566 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 WNT11O96014 354 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 USP17L7P0C7H9 530 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 NASPP49321 788 aaPredicted RBP5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 KIAA0907Q7Z7F0 614 aaPredicted RBP5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 CLEC10AQ8IUN9 316 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 LILRB2Q8N423 598 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 GALNT11Q8NCW6 608 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 SH3TC2Q8TF17 1288 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 SPON2Q9BUD6 331 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 KBTBD4Q9NVX7 518 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 MRVI1Q9Y6F6 885 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 CARMIL1Q5VZK9 1371 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 PHLDB1Q86UU1 1377 aa5.25□□□□□ -1.57
IGHV3-29-201ENST00000604817 ARAP3Q8WWN8 1544 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 KIF21BO75037 1637 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 A0A1W2PP55 124 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 FAM177BA6PVY3 158 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 EIF3JO75822 258 aaKnown RBP5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 POLR3DP05423 398 aaPredicted RBP5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 HSPA2P54652 639 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 GYS2P54840 703 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 TBX4P57082 545 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 CHMP4BP1P59074 171 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 GRM2Q14416 872 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 DUOXA2Q1HG44 320 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 ARSHQ5FYA8 562 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 CEP135Q66GS9 1140 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 NXPE4Q6UWF7 544 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 TRIM42Q8IWZ5 723 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 CCDC146Q8IYE0 955 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 HNRNPLLQ8WVV9 542 aaKnown RBP5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 IER2Q9BTL4 223 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 EHD4Q9H223 541 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 KANSL3Q9P2N6 904 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 ADAMTS1Q9UHI8 967 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 HIF3AQ9Y2N7 669 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 WDR7Q9Y4E6 1490 aa5.24□□□□□ -1.57
IGHV3-29-201ENST00000604817 PCF11O94913 1555 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms