RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 CCDC84Q86UT8 332 aaPredicted RBP21.18■□□□□ 0.98
SMG9-210ENST00000600097 ANKRD13CQ8N6S4 541 aa21.18■□□□□ 0.98
SMG9-210ENST00000600097 ZNF280CQ8ND82 737 aa21.18■□□□□ 0.98
SMG9-210ENST00000600097 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.18■□□□□ 0.98
SMG9-210ENST00000600097 FAM196BA6NMK8 535 aa21.17■□□□□ 0.98
SMG9-210ENST00000600097 GNAI2P04899 355 aa21.17■□□□□ 0.98
SMG9-210ENST00000600097 UQCRFS1P1P0C7P4 283 aa21.17■□□□□ 0.98
SMG9-210ENST00000600097 GCLCP48506 637 aaPredicted RBP21.17■□□□□ 0.98
SMG9-210ENST00000600097 SPP2Q13103 211 aa21.17■□□□□ 0.98
SMG9-210ENST00000600097 G3BP1Q13283 466 aaKnown RBP eCLIP21.17■□□□□ 0.98
SMG9-210ENST00000600097 TREML2Q5T2D2 321 aa21.17■□□□□ 0.98
SMG9-210ENST00000600097 PI16Q6UXB8 463 aa21.17■□□□□ 0.98
SMG9-210ENST00000600097 TBC1D9Q6ZT07 1266 aa21.17■□□□□ 0.98
SMG9-210ENST00000600097 HERC5Q9UII4 1024 aaKnown RBP21.17■□□□□ 0.98
SMG9-210ENST00000600097 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.17■□□□□ 0.98
SMG9-210ENST00000600097 MGAMO43451 1857 aa21.17■□□□□ 0.98
SMG9-210ENST00000600097 CAP2P40123 477 aa21.16■□□□□ 0.98
SMG9-210ENST00000600097 NOL10Q9BSC4 688 aaKnown RBP21.16■□□□□ 0.98
SMG9-210ENST00000600097 LRP2BPQ9P2M1 347 aa21.16■□□□□ 0.98
SMG9-210ENST00000600097 RBM27Q9P2N5 1060 aaKnown RBP21.16■□□□□ 0.98
SMG9-210ENST00000600097 PTPRFP10586 1907 aa21.16■□□□□ 0.98
SMG9-210ENST00000600097 USP17L5A8MUK1 530 aa21.15■□□□□ 0.98
SMG9-210ENST00000600097 TFRCP02786 760 aaKnown RBP21.15■□□□□ 0.98
SMG9-210ENST00000600097 TRIM27P14373 513 aa21.15■□□□□ 0.98
SMG9-210ENST00000600097 TEX11Q8IYF3 940 aa21.15■□□□□ 0.98
SMG9-210ENST00000600097 DEFB118Q96PH6 123 aa21.15■□□□□ 0.98
SMG9-210ENST00000600097 AS3MTQ9HBK9 375 aa21.15■□□□□ 0.98
SMG9-210ENST00000600097 PAK6Q9NQU5 681 aaPredicted RBP21.15■□□□□ 0.98
SMG9-210ENST00000600097 PHIPQ8WWQ0 1821 aa21.15■□□□□ 0.98
SMG9-210ENST00000600097 MCAMP43121 646 aa21.14■□□□□ 0.97
SMG9-210ENST00000600097 ATF7IPQ6VMQ6 1270 aa21.14■□□□□ 0.97
SMG9-210ENST00000600097 DHX36Q9H2U1 1008 aaKnown RBP21.14■□□□□ 0.97
SMG9-210ENST00000600097 PI4KBQ9UBF8 816 aa21.14■□□□□ 0.97
SMG9-210ENST00000600097 TAOK2Q9UL54 1235 aa21.14■□□□□ 0.97
SMG9-210ENST00000600097 PNMA6EA0A0J9YXQ4 647 aa21.13■□□□□ 0.97
SMG9-210ENST00000600097 BAG3O95817 575 aa21.13■□□□□ 0.97
SMG9-210ENST00000600097 PLCG2P16885 1265 aa21.13■□□□□ 0.97
SMG9-210ENST00000600097 HMGCS2P54868 508 aa21.13■□□□□ 0.97
SMG9-210ENST00000600097 SH3D19Q5HYK7 790 aa21.13■□□□□ 0.97
SMG9-210ENST00000600097 CCER2I3L3R5 266 aa21.12■□□□□ 0.97
SMG9-210ENST00000600097 ZBTB7BO15156 539 aaPredicted RBP21.12■□□□□ 0.97
SMG9-210ENST00000600097 CRISPLD2Q9H0B8 497 aa21.12■□□□□ 0.97
SMG9-210ENST00000600097 PRO3102Q9H379 93 aa21.12■□□□□ 0.97
SMG9-210ENST00000600097 GPR108Q9NPR9 543 aa21.12■□□□□ 0.97
SMG9-210ENST00000600097 EVI5O60447 810 aa21.11■□□□□ 0.97
SMG9-210ENST00000600097 IGSF3O75054 1194 aa21.11■□□□□ 0.97
SMG9-210ENST00000600097 NAA16Q6N069 864 aaPredicted RBP21.11■□□□□ 0.97
SMG9-210ENST00000600097 SH3RF3Q8TEJ3 882 aaPredicted RBP21.11■□□□□ 0.97
SMG9-210ENST00000600097 FRAT1Q92837 279 aaPredicted RBP21.11■□□□□ 0.97
SMG9-210ENST00000600097 WDR18Q9BV38 432 aa21.11■□□□□ 0.97
SMG9-210ENST00000600097 ASCC2Q9H1I8 757 aaPredicted RBP21.11■□□□□ 0.97
SMG9-210ENST00000600097 HMGCRP04035 888 aa21.1■□□□□ 0.97
SMG9-210ENST00000600097 ASNSP08243 561 aa21.1■□□□□ 0.97
SMG9-210ENST00000600097 RRP1BQ14684 758 aaKnown RBP21.1■□□□□ 0.97
SMG9-210ENST00000600097 CCDC158Q5M9N0 1113 aa21.1■□□□□ 0.97
SMG9-210ENST00000600097 A0A1W2PPC1 479 aa21.09■□□□□ 0.97
SMG9-210ENST00000600097 PPP4CP60510 307 aa21.09■□□□□ 0.97
SMG9-210ENST00000600097 TTC39AQ5SRH9 613 aa21.09■□□□□ 0.97
SMG9-210ENST00000600097 FOXP4Q8IVH2 680 aaPredicted RBP21.09■□□□□ 0.97
SMG9-210ENST00000600097 CLUAP1Q96AJ1 413 aa21.09■□□□□ 0.97
SMG9-210ENST00000600097 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.09■□□□□ 0.97
SMG9-210ENST00000600097 GINM1Q9NU53 330 aa21.09■□□□□ 0.97
SMG9-210ENST00000600097 AATFQ9NY61 560 aaKnown RBP eCLIP21.09■□□□□ 0.97
SMG9-210ENST00000600097 LOC285556D6RIA3 1793 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 BCAR3O75815 825 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 BACE1P56817 501 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 IRX3P78415 501 aaPredicted RBP21.08■□□□□ 0.97
SMG9-210ENST00000600097 TNNI3KQ59H18 835 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 NECAB2Q7Z6G3 386 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 ANKLE1Q8NAG6 615 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 SNRKQ9NRH2 765 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 TMOD4Q9NZQ9 345 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 MORF4L1Q9UBU8 362 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 GJD2Q9UKL4 321 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 FPGT-TNNI3KV9GXZ4 949 aa21.08■□□□□ 0.97
SMG9-210ENST00000600097 RANBP2P49792 3224 aaKnown RBP21.07■□□□□ 0.96
SMG9-210ENST00000600097 C19orf81C9J6K1 198 aa21.07■□□□□ 0.96
SMG9-210ENST00000600097 HOXA7P31268 230 aaPredicted RBP21.07■□□□□ 0.96
SMG9-210ENST00000600097 OS9Q13438 667 aaPredicted RBP21.07■□□□□ 0.96
SMG9-210ENST00000600097 MTMR2Q13614 643 aa21.07■□□□□ 0.96
SMG9-210ENST00000600097 POLA2Q14181 598 aa21.07■□□□□ 0.96
SMG9-210ENST00000600097 METTL16Q86W50 562 aaKnown RBP21.07■□□□□ 0.96
SMG9-210ENST00000600097 TGFBRAP1Q8WUH2 860 aa21.07■□□□□ 0.96
SMG9-210ENST00000600097 PAWRQ96IZ0 340 aaKnown RBP21.07■□□□□ 0.96
SMG9-210ENST00000600097 ZNF512BQ96KM6 892 aaPredicted RBP21.07■□□□□ 0.96
SMG9-210ENST00000600097 TRIM34Q9BYJ4 488 aa21.07■□□□□ 0.96
SMG9-210ENST00000600097 HMX1Q9NP08 348 aaPredicted RBP21.07■□□□□ 0.96
SMG9-210ENST00000600097 TNNQ9UQP3 1299 aa21.07■□□□□ 0.96
SMG9-210ENST00000600097 RPTORQ8N122 1335 aa21.06■□□□□ 0.96
SMG9-210ENST00000600097 MAPKAPK5Q8IW41 473 aa21.06■□□□□ 0.96
SMG9-210ENST00000600097 CRACR2BQ8N4Y2 399 aaPredicted RBP21.06■□□□□ 0.96
SMG9-210ENST00000600097 DBNDD2Q9BQY9 259 aa21.06■□□□□ 0.96
SMG9-210ENST00000600097 DOCK3Q8IZD9 2030 aa21.05■□□□□ 0.96
SMG9-210ENST00000600097 FLT1P17948 1338 aa21.05■□□□□ 0.96
SMG9-210ENST00000600097 CYP2E1P05181 493 aaPredicted RBP21.05■□□□□ 0.96
SMG9-210ENST00000600097 ZKSCAN2Q63HK3 967 aa21.05■□□□□ 0.96
SMG9-210ENST00000600097 SSH3Q8TE77 659 aa21.05■□□□□ 0.96
SMG9-210ENST00000600097 USP17L10C9JJH3 530 aa21.04■□□□□ 0.96
SMG9-210ENST00000600097 TMEM57Q8N5G2 664 aa21.04■□□□□ 0.96
SMG9-210ENST00000600097 GPRC5AQ8NFJ5 357 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms