RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 FLT1P17948 1338 aa19.9■□□□□ 0.78
CCDC130-212ENST00000593174 WDR33Q9C0J8 1336 aaKnown RBP19.9■□□□□ 0.78
CCDC130-212ENST00000593174 ESPNB1AK53 854 aa19.9■□□□□ 0.78
CCDC130-212ENST00000593174 B4E1Z4 1266 aa19.9■□□□□ 0.78
CCDC130-212ENST00000593174 PRC1O43663 620 aa19.9■□□□□ 0.78
CCDC130-212ENST00000593174 EIF6P56537 245 aaKnown RBP19.9■□□□□ 0.78
CCDC130-212ENST00000593174 TOB2Q14106 344 aaPredicted RBP19.9■□□□□ 0.78
CCDC130-212ENST00000593174 OGFOD1Q8N543 542 aa19.9■□□□□ 0.78
CCDC130-212ENST00000593174 KRT23Q9C075 422 aa19.9■□□□□ 0.78
CCDC130-212ENST00000593174 POLR3DP05423 398 aaPredicted RBP19.89■□□□□ 0.77
CCDC130-212ENST00000593174 SLC3A2P08195 630 aaKnown RBP19.89■□□□□ 0.77
CCDC130-212ENST00000593174 EVX2Q03828 476 aa19.89■□□□□ 0.77
CCDC130-212ENST00000593174 SLC4A8Q2Y0W8 1093 aa19.89■□□□□ 0.77
CCDC130-212ENST00000593174 RRP12Q5JTH9 1297 aaKnown RBP19.89■□□□□ 0.77
CCDC130-212ENST00000593174 C12orf60Q5U649 245 aa19.89■□□□□ 0.77
CCDC130-212ENST00000593174 SYAP1Q96A49 352 aaPredicted RBP19.89■□□□□ 0.77
CCDC130-212ENST00000593174 FZD9O00144 591 aa19.88■□□□□ 0.77
CCDC130-212ENST00000593174 WDHD1O75717 1129 aaPredicted RBP19.88■□□□□ 0.77
CCDC130-212ENST00000593174 LMNB1P20700 586 aa19.88■□□□□ 0.77
CCDC130-212ENST00000593174 PICALMQ13492 652 aa19.88■□□□□ 0.77
CCDC130-212ENST00000593174 CYB5R4Q7L1T6 521 aa19.88■□□□□ 0.77
CCDC130-212ENST00000593174 NKX2-3Q8TAU0 364 aa19.88■□□□□ 0.77
CCDC130-212ENST00000593174 ZSCAN31Q96LW9 406 aaPredicted RBP19.88■□□□□ 0.77
CCDC130-212ENST00000593174 DICER1Q9UPY3 1922 aaKnown RBP19.88■□□□□ 0.77
CCDC130-212ENST00000593174 SBF1O95248 1867 aa19.88■□□□□ 0.77
CCDC130-212ENST00000593174 YBX3P16989 372 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC130-212ENST00000593174 ANTXR2P58335 489 aa19.88■□□□□ 0.77
CCDC130-212ENST00000593174 WDR19Q8NEZ3 1342 aa19.87■□□□□ 0.77
CCDC130-212ENST00000593174 KDM4AO75164 1064 aa19.87■□□□□ 0.77
CCDC130-212ENST00000593174 BRF1Q92994 677 aa19.87■□□□□ 0.77
CCDC130-212ENST00000593174 DDX4Q9NQI0 724 aaKnown RBP19.87■□□□□ 0.77
CCDC130-212ENST00000593174 TPCN1Q9ULQ1 816 aa19.87■□□□□ 0.77
CCDC130-212ENST00000593174 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.87■□□□□ 0.77
CCDC130-212ENST00000593174 DDX60LQ5H9U9 1706 aaKnown RBP19.86■□□□□ 0.77
CCDC130-212ENST00000593174 PCP11498 1178 aaKnown RBP19.86■□□□□ 0.77
CCDC130-212ENST00000593174 DLGAP5Q15398 846 aa19.86■□□□□ 0.77
CCDC130-212ENST00000593174 HS1BP3Q53T59 392 aa19.86■□□□□ 0.77
CCDC130-212ENST00000593174 PRMT6Q96LA8 375 aaPredicted RBP19.86■□□□□ 0.77
CCDC130-212ENST00000593174 ZSWIM5Q9P217 1185 aa19.86■□□□□ 0.77
CCDC130-212ENST00000593174 GJA3Q9Y6H8 435 aa19.86■□□□□ 0.77
CCDC130-212ENST00000593174 LARGE1O95461 756 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 FGRP09769 529 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 PDIA4P13667 645 aaKnown RBP19.85■□□□□ 0.77
CCDC130-212ENST00000593174 RPS12P25398 132 aaKnown RBP19.85■□□□□ 0.77
CCDC130-212ENST00000593174 PLCD1P51178 756 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 GPT2Q8TD30 523 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 TDRD3Q9H7E2 651 aaKnown RBP19.85■□□□□ 0.77
CCDC130-212ENST00000593174 SH2B1Q9NRF2 756 aaPredicted RBP19.85■□□□□ 0.77
CCDC130-212ENST00000593174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.85■□□□□ 0.77
CCDC130-212ENST00000593174 SPDYE2BA6NHP3 402 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 PRDM1O75626 825 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 SPDYE6P0CI01 402 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 PDE4BQ07343 736 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 NFIAQ12857 509 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 ME3Q16798 604 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 LRSAM1Q6UWE0 723 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 FBXL16Q8N461 479 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 ESR2Q92731 530 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 DYNLL2Q96FJ2 89 aa19.85■□□□□ 0.77
CCDC130-212ENST00000593174 GPHNQ9NQX3 736 aaPredicted RBP19.85■□□□□ 0.77
CCDC130-212ENST00000593174 ORC4O43929 436 aa19.84■□□□□ 0.77
CCDC130-212ENST00000593174 CACNB3P54284 484 aa19.84■□□□□ 0.77
CCDC130-212ENST00000593174 APOBRQ0VD83 1088 aa19.84■□□□□ 0.77
CCDC130-212ENST00000593174 ZNF541Q9H0D2 1346 aa19.84■□□□□ 0.77
CCDC130-212ENST00000593174 ROBO3Q96MS0 1386 aa19.84■□□□□ 0.77
CCDC130-212ENST00000593174 RANBP6O60518 1105 aaKnown RBP19.83■□□□□ 0.77
CCDC130-212ENST00000593174 GMPSP49915 693 aaPredicted RBP19.83■□□□□ 0.77
CCDC130-212ENST00000593174 TMEM87BQ96K49 555 aa19.83■□□□□ 0.77
CCDC130-212ENST00000593174 IDI2Q9BXS1 227 aa19.83■□□□□ 0.77
CCDC130-212ENST00000593174 OSBPL5Q9H0X9 879 aaPredicted RBP19.83■□□□□ 0.77
CCDC130-212ENST00000593174 ATP6V1DQ9Y5K8 247 aa19.83■□□□□ 0.77
CCDC130-212ENST00000593174 MMP14P50281 582 aa19.83■□□□□ 0.76
CCDC130-212ENST00000593174 TTC6Q86TZ1 520 aa19.83■□□□□ 0.76
CCDC130-212ENST00000593174 MTMR14Q8NCE2 650 aa19.83■□□□□ 0.76
CCDC130-212ENST00000593174 SHTN1A0MZ66 631 aa19.82■□□□□ 0.76
CCDC130-212ENST00000593174 SH2B2O14492 632 aaPredicted RBP19.82■□□□□ 0.76
CCDC130-212ENST00000593174 IFIT3O14879 490 aaKnown RBP19.82■□□□□ 0.76
CCDC130-212ENST00000593174 NECAB1Q8N987 351 aa19.82■□□□□ 0.76
CCDC130-212ENST00000593174 DPF2Q92785 391 aa19.82■□□□□ 0.76
CCDC130-212ENST00000593174 MKNK2Q9HBH9 465 aa19.82■□□□□ 0.76
CCDC130-212ENST00000593174 FAM198AQ9UFP1 575 aa19.82■□□□□ 0.76
CCDC130-212ENST00000593174 TCP10Q12799 353 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 STK3Q13188 491 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 TMEM67Q5HYA8 995 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 CCDC83Q8IWF9 413 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 ZFPM1Q8IX07 1006 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 IGDCC4Q8TDY8 1250 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 ZKSCAN3Q9BRR0 538 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 MYOZ2Q9NPC6 264 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 TMOD2Q9NZR1 351 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 RNF181Q9P0P0 153 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 NAP1L2Q9ULW6 460 aaPredicted RBP19.81■□□□□ 0.76
CCDC130-212ENST00000593174 ANGEL1Q9UNK9 670 aaKnown RBP19.81■□□□□ 0.76
CCDC130-212ENST00000593174 UTRNP46939 3433 aa19.81■□□□□ 0.76
CCDC130-212ENST00000593174 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
CCDC130-212ENST00000593174 ZNF280AP59817 542 aaPredicted RBP19.8■□□□□ 0.76
CCDC130-212ENST00000593174 SART3Q15020 963 aaKnown RBP19.8■□□□□ 0.76
CCDC130-212ENST00000593174 GPR162Q16538 588 aa19.8■□□□□ 0.76
CCDC130-212ENST00000593174 C16orf86Q6ZW13 317 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms