RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ZNF384Q8TF68 577 aa14.29□□□□□ -0.12
DDX39A-219ENST00000592927 RILPL2Q969X0 211 aa14.29□□□□□ -0.12
DDX39A-219ENST00000592927 FSD1Q9BTV5 496 aa14.29□□□□□ -0.12
DDX39A-219ENST00000592927 GAKO14976 1311 aa14.29□□□□□ -0.12
DDX39A-219ENST00000592927 TESPA1A2RU30 521 aaPredicted RBP14.28□□□□□ -0.12
DDX39A-219ENST00000592927 BAG3O95817 575 aa14.28□□□□□ -0.12
DDX39A-219ENST00000592927 MAP3K11Q16584 847 aa14.28□□□□□ -0.12
DDX39A-219ENST00000592927 UBE2Q1Q7Z7E8 422 aa14.28□□□□□ -0.12
DDX39A-219ENST00000592927 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDX39A-219ENST00000592927 TDRD3Q9H7E2 651 aaKnown RBP14.28□□□□□ -0.12
DDX39A-219ENST00000592927 ZNF532Q9HCE3 1301 aa14.28□□□□□ -0.12
DDX39A-219ENST00000592927 UNC80Q8N2C7 3258 aa14.27□□□□□ -0.12
DDX39A-219ENST00000592927 GPR75-ASB3A0A0A6YYF3 556 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 CLRN2A0PK11 232 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 ZFYP08048 801 aaPredicted RBP14.27□□□□□ -0.13
DDX39A-219ENST00000592927 ADD2P35612 726 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 BTDP43251 543 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 UBE3CQ15386 1083 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 GPR153Q6NV75 609 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 PRDM6Q9NQX0 595 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 USP40Q9NVE5 1235 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 TMOD2Q9NZR1 351 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 LAMA3Q16787 3333 aa14.27□□□□□ -0.13
DDX39A-219ENST00000592927 RFX7Q2KHR2 1363 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 HIP1O00291 1037 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 RNF113AO15541 343 aaKnown RBP14.26□□□□□ -0.13
DDX39A-219ENST00000592927 PPP1R12BO60237 982 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-219ENST00000592927 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 CDC42EP5Q6NZY7 148 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 ADGRA1Q86SQ6 560 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 NKX2-3Q8TAU0 364 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 ARHGAP39Q9C0H5 1083 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 VEZTQ9HBM0 779 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 ZFYVE28Q9HCC9 887 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 MTMR10Q9NXD2 777 aa14.26□□□□□ -0.13
DDX39A-219ENST00000592927 AATFQ9NY61 560 aaKnown RBP eCLIP14.26□□□□□ -0.13
DDX39A-219ENST00000592927 ZNF70Q9UC06 446 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-219ENST00000592927 MAGEB6P1A0A0J9YX57 407 aa14.25□□□□□ -0.13
DDX39A-219ENST00000592927 TCRBV5S4A2TA0A5A2 114 aa14.25□□□□□ -0.13
DDX39A-219ENST00000592927 SEC24BO95487 1268 aa14.25□□□□□ -0.13
DDX39A-219ENST00000592927 PLCG2P16885 1265 aa14.25□□□□□ -0.13
DDX39A-219ENST00000592927 PPP4CP60510 307 aa14.25□□□□□ -0.13
DDX39A-219ENST00000592927 CERS3Q8IU89 383 aa14.25□□□□□ -0.13
DDX39A-219ENST00000592927 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
DDX39A-219ENST00000592927 DEFB129Q9H1M3 183 aa14.25□□□□□ -0.13
DDX39A-219ENST00000592927 MAST2Q6P0Q8 1798 aa14.24□□□□□ -0.13
DDX39A-219ENST00000592927 UNCXA6NJT0 531 aa14.24□□□□□ -0.13
DDX39A-219ENST00000592927 EVI5O60447 810 aa14.24□□□□□ -0.13
DDX39A-219ENST00000592927 CHGBP05060 677 aa14.24□□□□□ -0.13
DDX39A-219ENST00000592927 CHMLP26374 656 aa14.24□□□□□ -0.13
DDX39A-219ENST00000592927 GJA8P48165 433 aa14.24□□□□□ -0.13
DDX39A-219ENST00000592927 TAF1CQ15572 869 aaPredicted RBP14.24□□□□□ -0.13
DDX39A-219ENST00000592927 SLFNL1Q499Z3 407 aa14.24□□□□□ -0.13
DDX39A-219ENST00000592927 APPBP2Q92624 585 aa14.24□□□□□ -0.13
DDX39A-219ENST00000592927 DOCK2Q92608 1830 aa14.24□□□□□ -0.13
DDX39A-219ENST00000592927 MYH7P12883 1935 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 TCP10L2B9ZVM9 353 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 EPB41L2O43491 1005 aaKnown RBP14.23□□□□□ -0.13
DDX39A-219ENST00000592927 REC8O95072 547 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 TNNI2P48788 182 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 CACNB3P54284 484 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 MFAP1P55081 439 aaKnown RBP14.23□□□□□ -0.13
DDX39A-219ENST00000592927 RHBDL3P58872 404 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 DYNLL1P63167 89 aaKnown RBP14.23□□□□□ -0.13
DDX39A-219ENST00000592927 TNFAIP1Q13829 316 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 KIF22Q14807 665 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 FKBP1CQ5VVH2 108 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 TEX11Q8IYF3 940 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 SH3RF3Q8TEJ3 882 aaPredicted RBP14.23□□□□□ -0.13
DDX39A-219ENST00000592927 RUFY2Q8WXA3 655 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 MS4A4AQ96JQ5 239 aa14.23□□□□□ -0.13
DDX39A-219ENST00000592927 MYH2Q9UKX2 1941 aa14.22□□□□□ -0.13
DDX39A-219ENST00000592927 ECM2O94769 699 aaPredicted RBP14.22□□□□□ -0.13
DDX39A-219ENST00000592927 MBD4O95243 580 aa14.22□□□□□ -0.13
DDX39A-219ENST00000592927 GJB1P08034 283 aa14.22□□□□□ -0.13
DDX39A-219ENST00000592927 ZMYM1Q5SVZ6 1142 aa14.22□□□□□ -0.13
DDX39A-219ENST00000592927 BRI3BPQ8WY22 251 aa14.22□□□□□ -0.13
DDX39A-219ENST00000592927 RIOK1Q9BRS2 568 aaKnown RBP14.22□□□□□ -0.13
DDX39A-219ENST00000592927 ESYT1Q9BSJ8 1104 aa14.22□□□□□ -0.13
DDX39A-219ENST00000592927 PUS7LQ9H0K6 701 aaKnown RBP14.22□□□□□ -0.13
DDX39A-219ENST00000592927 DIAPH3Q9NSV4 1193 aa14.22□□□□□ -0.13
DDX39A-219ENST00000592927 MYO5AQ9Y4I1 1855 aaKnown RBP14.21□□□□□ -0.13
DDX39A-219ENST00000592927 USP2O75604 605 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-219ENST00000592927 WDHD1O75717 1129 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-219ENST00000592927 FARP2O94887 1054 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-219ENST00000592927 CCL5P13501 91 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 IREB2P48200 963 aaKnown RBP14.21□□□□□ -0.13
DDX39A-219ENST00000592927 PRMT2P55345 433 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 LACTBP83111 547 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-219ENST00000592927 NFIAQ12857 509 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 RASA3Q14644 834 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 SUPT20HL1Q3ZLR7 823 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 FAM83AQ86UY5 434 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 ANKRD13AQ8IZ07 590 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 OSBP2Q969R2 916 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 OPTNQ96CV9 577 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 TBC1D32Q96NH3 1257 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 IDI2Q9BXS1 227 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 CRNKL1Q9BZJ0 848 aaKnown RBP14.21□□□□□ -0.13
DDX39A-219ENST00000592927 ARMT1Q9H993 441 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms