RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 HDAC5Q9UQL6 1122 aa22.63■■□□□ 1.21
CIRBP-238ENST00000592412 ATAD5Q96QE3 1844 aa22.63■■□□□ 1.21
CIRBP-238ENST00000592412 A0A0C4DFX4 3053 aa22.63■■□□□ 1.21
CIRBP-238ENST00000592412 ALPK3Q96L96 1907 aa22.63■■□□□ 1.21
CIRBP-238ENST00000592412 SIPA1L1O43166 1804 aa22.62■■□□□ 1.21
CIRBP-238ENST00000592412 FAM110CQ1W6H9 321 aa22.62■■□□□ 1.21
CIRBP-238ENST00000592412 PROCA1Q8NCQ7 364 aaPredicted RBP22.62■■□□□ 1.21
CIRBP-238ENST00000592412 CRISPLD2Q9H0B8 497 aa22.62■■□□□ 1.21
CIRBP-238ENST00000592412 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.62■■□□□ 1.211e-6■■□□□ 11.4
CIRBP-238ENST00000592412 AKAP2Q9Y2D5 859 aa22.62■■□□□ 1.21
CIRBP-238ENST00000592412 SPP2Q13103 211 aa22.61■■□□□ 1.21
CIRBP-238ENST00000592412 SPATA5Q8NB90 893 aa22.61■■□□□ 1.21
CIRBP-238ENST00000592412 OSBPL5Q9H0X9 879 aaPredicted RBP22.61■■□□□ 1.21
CIRBP-238ENST00000592412 NR2E3Q9Y5X4 410 aa22.61■■□□□ 1.21
CIRBP-238ENST00000592412 ARID4AP29374 1257 aaPredicted RBP22.6■■□□□ 1.21
CIRBP-238ENST00000592412 NEUROD6Q96NK8 337 aa22.6■■□□□ 1.21
CIRBP-238ENST00000592412 TFRCP02786 760 aaKnown RBP22.59■■□□□ 1.21
CIRBP-238ENST00000592412 GNAI3P08754 354 aa22.59■■□□□ 1.21
CIRBP-238ENST00000592412 MCAMP43121 646 aa22.59■■□□□ 1.21
CIRBP-238ENST00000592412 HMGCS2P54868 508 aa22.59■■□□□ 1.21
CIRBP-238ENST00000592412 ZNF280CQ8ND82 737 aa22.59■■□□□ 1.21
CIRBP-238ENST00000592412 DIS3LQ8TF46 1054 aaKnown RBP22.59■■□□□ 1.21
CIRBP-238ENST00000592412 ARHGAP45Q92619 1136 aa22.59■■□□□ 1.21
CIRBP-238ENST00000592412 COA7Q96BR5 231 aa22.59■■□□□ 1.21
CIRBP-238ENST00000592412 PNMA3Q9UL41 463 aa22.59■■□□□ 1.21
CIRBP-238ENST00000592412 TAOK2Q9UL54 1235 aa22.59■■□□□ 1.21
CIRBP-238ENST00000592412 TNNQ9UQP3 1299 aa22.59■■□□□ 1.21
CIRBP-238ENST00000592412 MAP4K4O95819 1239 aaPredicted RBP22.58■■□□□ 1.21
CIRBP-238ENST00000592412 CAP2P40123 477 aa22.58■■□□□ 1.21
CIRBP-238ENST00000592412 GJD2Q9UKL4 321 aa22.58■■□□□ 1.21
CIRBP-238ENST00000592412 PLXNB2O15031 1838 aa22.58■■□□□ 1.21
CIRBP-238ENST00000592412 JAG1P78504 1218 aa22.57■■□□□ 1.2
CIRBP-238ENST00000592412 SH3D19Q5HYK7 790 aa22.57■■□□□ 1.2
CIRBP-238ENST00000592412 PAWRQ96IZ0 340 aaKnown RBP22.57■■□□□ 1.2
CIRBP-238ENST00000592412 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.57■■□□□ 1.24e-7■■■■□ 22.1
CIRBP-238ENST00000592412 ASCC2Q9H1I8 757 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-238ENST00000592412 PNMA6EA0A0J9YXQ4 647 aa22.56■■□□□ 1.2
CIRBP-238ENST00000592412 SOX1O00570 391 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-238ENST00000592412 EVI5O60447 810 aa22.56■■□□□ 1.2
CIRBP-238ENST00000592412 LDHCP07864 332 aa22.56■■□□□ 1.2
CIRBP-238ENST00000592412 GSTO1P78417 241 aa22.56■■□□□ 1.2
CIRBP-238ENST00000592412 TRIM32Q13049 653 aa22.56■■□□□ 1.2
CIRBP-238ENST00000592412 SH3RF3Q8TEJ3 882 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-238ENST00000592412 RAI14Q9P0K7 980 aa22.56■■□□□ 1.2
CIRBP-238ENST00000592412 CAPN2P17655 700 aa22.55■■□□□ 1.2
CIRBP-238ENST00000592412 GCLCP48506 637 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-238ENST00000592412 MNX1P50219 401 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-238ENST00000592412 TEX11Q8IYF3 940 aa22.55■■□□□ 1.2
CIRBP-238ENST00000592412 DNAJC18Q9H819 358 aa22.55■■□□□ 1.2
CIRBP-238ENST00000592412 MAST2Q6P0Q8 1798 aa22.54■■□□□ 1.2
CIRBP-238ENST00000592412 USP17L5A8MUK1 530 aa22.54■■□□□ 1.2
CIRBP-238ENST00000592412 PEX10O60683 326 aa22.54■■□□□ 1.2
CIRBP-238ENST00000592412 HMGCRP04035 888 aa22.54■■□□□ 1.2
CIRBP-238ENST00000592412 TRIM27P14373 513 aa22.54■■□□□ 1.2
CIRBP-238ENST00000592412 SHROOM1Q2M3G4 852 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-238ENST00000592412 TBC1D2Q9BYX2 928 aa22.54■■□□□ 1.2
CIRBP-238ENST00000592412 STAP2Q9UGK3 403 aa22.54■■□□□ 1.2
CIRBP-238ENST00000592412 HERC5Q9UII4 1024 aaKnown RBP22.54■■□□□ 1.2
CIRBP-238ENST00000592412 CDK5RAP2Q96SN8 1893 aa22.54■■□□□ 1.2
CIRBP-238ENST00000592412 A0A1W2PPC1 479 aa22.53■■□□□ 1.2
CIRBP-238ENST00000592412 GORABQ5T7V8 394 aa22.53■■□□□ 1.2
CIRBP-238ENST00000592412 ADGRA1Q86SQ6 560 aa22.53■■□□□ 1.2
CIRBP-238ENST00000592412 MORF4L1Q9UBU8 362 aa22.53■■□□□ 1.2
CIRBP-238ENST00000592412 DNAH12Q6ZR08 3092 aa22.52■■□□□ 1.2
CIRBP-238ENST00000592412 LRCH3Q96II8 777 aa22.52■■□□□ 1.2
CIRBP-238ENST00000592412 WDR18Q9BV38 432 aa22.52■■□□□ 1.2
CIRBP-238ENST00000592412 FOCADQ5VW36 1801 aa22.52■■□□□ 1.2
CIRBP-238ENST00000592412 GNAI2P04899 355 aa22.51■■□□□ 1.19
CIRBP-238ENST00000592412 PABPC4Q13310 644 aaKnown RBP eCLIP22.51■■□□□ 1.192e-9■□□□□ 10
CIRBP-238ENST00000592412 MTMR2Q13614 643 aa22.51■■□□□ 1.19
CIRBP-238ENST00000592412 NECAB2Q7Z6G3 386 aa22.51■■□□□ 1.19
CIRBP-238ENST00000592412 METTL16Q86W50 562 aaKnown RBP22.51■■□□□ 1.19
CIRBP-238ENST00000592412 TRIB2Q92519 343 aa22.51■■□□□ 1.19
CIRBP-238ENST00000592412 SNRKQ9NRH2 765 aa22.51■■□□□ 1.19
CIRBP-238ENST00000592412 AATFQ9NY61 560 aaKnown RBP eCLIP22.51■■□□□ 1.19
CIRBP-238ENST00000592412 LRP2BPQ9P2M1 347 aa22.51■■□□□ 1.19
CIRBP-238ENST00000592412 PI4KBQ9UBF8 816 aa22.51■■□□□ 1.19
CIRBP-238ENST00000592412 RPTORQ8N122 1335 aa22.51■■□□□ 1.19
CIRBP-238ENST00000592412 LAMA2P24043 3122 aaKnown RBP22.51■■□□□ 1.19
CIRBP-238ENST00000592412 BACE1P56817 501 aa22.5■■□□□ 1.19
CIRBP-238ENST00000592412 ANKLE1Q8NAG6 615 aa22.5■■□□□ 1.19
CIRBP-238ENST00000592412 P2RX7Q99572 595 aaKnown RBP22.5■■□□□ 1.19
CIRBP-238ENST00000592412 TXNRD2Q9NNW7 524 aa22.5■■□□□ 1.19
CIRBP-238ENST00000592412 DDX60LQ5H9U9 1706 aaKnown RBP22.5■■□□□ 1.19
CIRBP-238ENST00000592412 FLT1P17948 1338 aa22.5■■□□□ 1.19
CIRBP-238ENST00000592412 MYO5AQ9Y4I1 1855 aaKnown RBP22.49■■□□□ 1.19
CIRBP-238ENST00000592412 UQCRFS1P1P0C7P4 283 aa22.49■■□□□ 1.19
CIRBP-238ENST00000592412 PPP4CP60510 307 aa22.49■■□□□ 1.19
CIRBP-238ENST00000592412 G3BP1Q13283 466 aaKnown RBP eCLIP22.49■■□□□ 1.19
CIRBP-238ENST00000592412 MAP3K21Q5TCX8 1036 aa22.49■■□□□ 1.19
CIRBP-238ENST00000592412 POTEEQ6S8J3 1075 aa22.49■■□□□ 1.19
CIRBP-238ENST00000592412 MAPKAPK5Q8IW41 473 aa22.49■■□□□ 1.19
CIRBP-238ENST00000592412 GDF15Q99988 308 aa22.49■■□□□ 1.19
CIRBP-238ENST00000592412 DHX36Q9H2U1 1008 aaKnown RBP22.49■■□□□ 1.19
CIRBP-238ENST00000592412 AS3MTQ9HBK9 375 aa22.49■■□□□ 1.19
CIRBP-238ENST00000592412 BCAR3O75815 825 aa22.48■■□□□ 1.19
CIRBP-238ENST00000592412 CYP2E1P05181 493 aaPredicted RBP22.48■■□□□ 1.19
CIRBP-238ENST00000592412 HOXA7P31268 230 aaPredicted RBP22.48■■□□□ 1.19
CIRBP-238ENST00000592412 NAA16Q6N069 864 aaPredicted RBP22.48■■□□□ 1.19
CIRBP-238ENST00000592412 ATF7IPQ6VMQ6 1270 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms