RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-205	ENST00000589532	TLR7	Q9NYK1	1049 aa	Known RBP	29.18	■■■□□ 2.26
LSM7-205	ENST00000589532	LRP2BP	Q9P2M1	347 aa		29.18	■■■□□ 2.26
LSM7-205	ENST00000589532	ECM2	O94769	699 aa	Predicted RBP	29.17	■■■□□ 2.26
LSM7-205	ENST00000589532	TEX11	Q8IYF3	940 aa		29.17	■■■□□ 2.26
LSM7-205	ENST00000589532	TRIM75P	A6NK02	468 aa		29.16	■■■□□ 2.26
LSM7-205	ENST00000589532	CEP85	Q6P2H3	762 aa		29.16	■■■□□ 2.26
LSM7-205	ENST00000589532	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	29.16	■■■□□ 2.26
LSM7-205	ENST00000589532	MYPN	Q86TC9	1320 aa		29.16	■■■□□ 2.26
LSM7-205	ENST00000589532	PPP4C	P60510	307 aa		29.15	■■■□□ 2.26
LSM7-205	ENST00000589532	OS9	Q13438	667 aa	Predicted RBP	29.15	■■■□□ 2.26
LSM7-205	ENST00000589532	CCDC158	Q5M9N0	1113 aa		29.15	■■■□□ 2.26
LSM7-205	ENST00000589532	GADL1	Q6ZQY3	521 aa		29.15	■■■□□ 2.26
LSM7-205	ENST00000589532	PCDH10	Q9P2E7	1040 aa		29.15	■■■□□ 2.26
LSM7-205	ENST00000589532	AGTPBP1	Q9UPW5	1226 aa		29.15	■■■□□ 2.26
LSM7-205	ENST00000589532	IGSF3	O75054	1194 aa		29.14	■■■□□ 2.26
LSM7-205	ENST00000589532	NAA16	Q6N069	864 aa	Predicted RBP	29.14	■■■□□ 2.26
LSM7-205	ENST00000589532	SHISA4	Q96DD7	197 aa		29.14	■■■□□ 2.26
LSM7-205	ENST00000589532	AATF	Q9NY61	560 aa	Known RBP eCLIP	29.14	■■■□□ 2.26
LSM7-205	ENST00000589532	CEP290	O15078	2479 aa		29.14	■■■□□ 2.25
LSM7-205	ENST00000589532	FMNL1	O95466	1100 aa	Predicted RBP	29.13	■■■□□ 2.25
LSM7-205	ENST00000589532	ZAP70	P43403	619 aa		29.13	■■■□□ 2.25
LSM7-205	ENST00000589532	PRKCZ	Q05513	592 aa		29.13	■■■□□ 2.25
LSM7-205	ENST00000589532	TREML2	Q5T2D2	321 aa		29.13	■■■□□ 2.25
LSM7-205	ENST00000589532	EAF2	Q96CJ1	260 aa	Predicted RBP	29.13	■■■□□ 2.25
LSM7-205	ENST00000589532	DNAJC18	Q9H819	358 aa		29.13	■■■□□ 2.25
LSM7-205	ENST00000589532	PIH1D3	Q9NQM4	214 aa	Known RBP	29.13	■■■□□ 2.25
LSM7-205	ENST00000589532	HERC5	Q9UII4	1024 aa	Known RBP	29.13	■■■□□ 2.25
LSM7-205	ENST00000589532	FLT1	P17948	1338 aa		29.13	■■■□□ 2.25
LSM7-205	ENST00000589532	DDX60L	Q5H9U9	1706 aa	Known RBP	29.12	■■■□□ 2.25
LSM7-205	ENST00000589532	CAP2	P40123	477 aa		29.12	■■■□□ 2.25
LSM7-205	ENST00000589532	FCGRT	P55899	365 aa		29.12	■■■□□ 2.25
LSM7-205	ENST00000589532	MTFR1	Q15390	333 aa		29.12	■■■□□ 2.25
LSM7-205	ENST00000589532	SLC4A8	Q2Y0W8	1093 aa		29.12	■■■□□ 2.25
LSM7-205	ENST00000589532	METTL16	Q86W50	562 aa	Known RBP	29.12	■■■□□ 2.25
LSM7-205	ENST00000589532	MYC	P01106	439 aa	Predicted RBP	29.11	■■■□□ 2.25
LSM7-205	ENST00000589532	HOXD10	P28358	340 aa		29.11	■■■□□ 2.25
LSM7-205	ENST00000589532	PROCA1	Q8NCQ7	364 aa	Predicted RBP	29.11	■■■□□ 2.25
LSM7-205	ENST00000589532	RCAN3	Q9UKA8	241 aa		29.11	■■■□□ 2.25
LSM7-205	ENST00000589532	BAG3	O95817	575 aa		29.1	■■■□□ 2.25
LSM7-205	ENST00000589532	GRK4	P32298	578 aa		29.1	■■■□□ 2.25
LSM7-205	ENST00000589532	TBC1D2	Q9BYX2	928 aa		29.1	■■■□□ 2.25
LSM7-205	ENST00000589532	DHX36	Q9H2U1	1008 aa	Known RBP	29.1	■■■□□ 2.25
LSM7-205	ENST00000589532	PLCG2	P16885	1265 aa		29.09	■■■□□ 2.25
LSM7-205	ENST00000589532	ZNF280C	Q8ND82	737 aa		29.09	■■■□□ 2.25
LSM7-205	ENST00000589532	RAET1E	Q8TD07	263 aa		29.09	■■■□□ 2.25
LSM7-205	ENST00000589532	NOL10	Q9BSC4	688 aa	Known RBP	29.09	■■■□□ 2.25
LSM7-205	ENST00000589532	CCDC8	Q9H0W5	538 aa	Predicted RBP	29.09	■■■□□ 2.25
LSM7-205	ENST00000589532	PI4KB	Q9UBF8	816 aa		29.09	■■■□□ 2.25
LSM7-205	ENST00000589532	GABRQ	Q9UN88	632 aa		29.09	■■■□□ 2.25
LSM7-205	ENST00000589532	SPP2	Q13103	211 aa		29.08	■■■□□ 2.25
LSM7-205	ENST00000589532	SH3D19	Q5HYK7	790 aa		29.08	■■■□□ 2.25
LSM7-205	ENST00000589532	MAPKAPK5	Q8IW41	473 aa		29.08	■■■□□ 2.25
LSM7-205	ENST00000589532	PANK1	Q8TE04	598 aa		29.08	■■■□□ 2.25
LSM7-205	ENST00000589532	MS4A1	P11836	297 aa		29.07	■■■□□ 2.24
LSM7-205	ENST00000589532	JAG1	P78504	1218 aa		29.07	■■■□□ 2.24
LSM7-205	ENST00000589532	SMCR8	Q8TEV9	937 aa	Predicted RBP	29.07	■■■□□ 2.24
LSM7-205	ENST00000589532	TGFBRAP1	Q8WUH2	860 aa		29.07	■■■□□ 2.24
LSM7-205	ENST00000589532	FAM110C	Q1W6H9	321 aa		29.06	■■■□□ 2.24
LSM7-205	ENST00000589532	EXOC6B	Q9Y2D4	811 aa		29.06	■■■□□ 2.24
LSM7-205	ENST00000589532	RANBP2	P49792	3224 aa	Known RBP	29.06	■■■□□ 2.24
LSM7-205	ENST00000589532	DOCK3	Q8IZD9	2030 aa		29.05	■■■□□ 2.24
LSM7-205	ENST00000589532	MYH1	P12882	1939 aa		29.05	■■■□□ 2.24
LSM7-205	ENST00000589532	USP17L5	A8MUK1	530 aa		29.05	■■■□□ 2.24
LSM7-205	ENST00000589532	HMGCS2	P54868	508 aa		29.05	■■■□□ 2.24
LSM7-205	ENST00000589532	SLAIN1	Q8ND83	568 aa		29.05	■■■□□ 2.24
LSM7-205	ENST00000589532	PNMA3	Q9UL41	463 aa		29.05	■■■□□ 2.24
LSM7-205	ENST00000589532	DYNLL1	P63167	89 aa	Known RBP	29.04	■■■□□ 2.24
LSM7-205	ENST00000589532	SHROOM1	Q2M3G4	852 aa	Predicted RBP	29.04	■■■□□ 2.24
LSM7-205	ENST00000589532	UBE2Q1	Q7Z7E8	422 aa		29.04	■■■□□ 2.24
LSM7-205	ENST00000589532	GCC1	Q96CN9	775 aa		29.04	■■■□□ 2.24
LSM7-205	ENST00000589532	WDR18	Q9BV38	432 aa		29.04	■■■□□ 2.24
LSM7-205	ENST00000589532	NDUFB9	Q9Y6M9	179 aa		29.04	■■■□□ 2.24
LSM7-205	ENST00000589532	CCL5	P13501	91 aa		29.03	■■■□□ 2.24
LSM7-205	ENST00000589532	IRF5	Q13568	498 aa		29.03	■■■□□ 2.24
LSM7-205	ENST00000589532	PALD1	Q9ULE6	856 aa		29.03	■■■□□ 2.24
LSM7-205	ENST00000589532	GJB1	P08034	283 aa		29.02	■■■□□ 2.24
LSM7-205	ENST00000589532	FLT3LG	P49771	235 aa		29.02	■■■□□ 2.24
LSM7-205	ENST00000589532	ANKRD13C	Q8N6S4	541 aa		29.02	■■■□□ 2.24
LSM7-205	ENST00000589532	ANTXR1	Q9H6X2	564 aa		29.02	■■■□□ 2.24
LSM7-205	ENST00000589532	PLXNB2	O15031	1838 aa		29.01	■■■□□ 2.24
LSM7-205	ENST00000589532	TNPO2	O14787	897 aa	Known RBP	29.01	■■■□□ 2.23
LSM7-205	ENST00000589532	ASNS	P08243	561 aa		29.01	■■■□□ 2.23
LSM7-205	ENST00000589532	CYP7A1	P22680	504 aa		29.01	■■■□□ 2.23
LSM7-205	ENST00000589532	GJA8	P48165	433 aa		29.01	■■■□□ 2.23
LSM7-205	ENST00000589532	ERC1	Q8IUD2	1116 aa		29.01	■■■□□ 2.23
LSM7-205	ENST00000589532	ASCC2	Q9H1I8	757 aa	Predicted RBP	29.01	■■■□□ 2.23
LSM7-205	ENST00000589532	AS3MT	Q9HBK9	375 aa		29.01	■■■□□ 2.23
LSM7-205	ENST00000589532	IDH1	O75874	414 aa	Known RBP	29	■■■□□ 2.23
LSM7-205	ENST00000589532	AACS	Q86V21	672 aa		29	■■■□□ 2.23
LSM7-205	ENST00000589532	FOXP4	Q8IVH2	680 aa	Predicted RBP	29	■■■□□ 2.23
LSM7-205	ENST00000589532	PXYLP1	Q8TE99	480 aa		29	■■■□□ 2.23
LSM7-205	ENST00000589532	ZBTB21	Q9ULJ3	1066 aa		29	■■■□□ 2.23
LSM7-205	ENST00000589532	NAV1	Q8NEY1	1877 aa		29	■■■□□ 2.23
LSM7-205	ENST00000589532	GCLC	P48506	637 aa	Predicted RBP	28.99	■■■□□ 2.23
LSM7-205	ENST00000589532	BACE1	P56817	501 aa		28.99	■■■□□ 2.23
LSM7-205	ENST00000589532	MTMR2	Q13614	643 aa		28.99	■■■□□ 2.23
LSM7-205	ENST00000589532	MIGA1	Q8NAN2	632 aa		28.99	■■■□□ 2.23
LSM7-205	ENST00000589532	GINM1	Q9NU53	330 aa		28.99	■■■□□ 2.23
LSM7-205	ENST00000589532	ADCY3	O60266	1144 aa		28.98	■■■□□ 2.23
LSM7-205	ENST00000589532	GDF11	O95390	407 aa		28.98	■■■□□ 2.23

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms