RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PLCD1P51178 756 aa17.7■□□□□ 0.42
NFIX-208ENST00000587260 SBK1Q52WX2 424 aa17.7■□□□□ 0.42
NFIX-208ENST00000587260 TBC1D10CQ8IV04 446 aa17.7■□□□□ 0.42
NFIX-208ENST00000587260 CSRNP1Q96S65 589 aa17.7■□□□□ 0.42
NFIX-208ENST00000587260 NBPF3Q9H094 633 aa17.7■□□□□ 0.42
NFIX-208ENST00000587260 ZSWIM6Q9HCJ5 1215 aa17.7■□□□□ 0.42
NFIX-208ENST00000587260 ANAPC4Q9UJX5 808 aa17.7■□□□□ 0.42
NFIX-208ENST00000587260 ATRNL1Q5VV63 1379 aa17.7■□□□□ 0.42
NFIX-208ENST00000587260 SLURP2P0DP57 97 aa17.69■□□□□ 0.42
NFIX-208ENST00000587260 ADCK5Q3MIX3 580 aa17.69■□□□□ 0.42
NFIX-208ENST00000587260 C12orf60Q5U649 245 aa17.69■□□□□ 0.42
NFIX-208ENST00000587260 PRAMEF18Q5VWM3 479 aa17.69■□□□□ 0.42
NFIX-208ENST00000587260 DLK2Q6UY11 383 aa17.69■□□□□ 0.42
NFIX-208ENST00000587260 SULF1Q8IWU6 871 aa17.69■□□□□ 0.42
NFIX-208ENST00000587260 ZC3H15Q8WU90 426 aaKnown RBP17.69■□□□□ 0.42
NFIX-208ENST00000587260 SNX21Q969T3 373 aa17.69■□□□□ 0.42
NFIX-208ENST00000587260 DYNLL2Q96FJ2 89 aa17.69■□□□□ 0.42
NFIX-208ENST00000587260 ROBO3Q96MS0 1386 aa17.68■□□□□ 0.42
NFIX-208ENST00000587260 MAP1SQ66K74 1059 aaPredicted RBP17.68■□□□□ 0.42
NFIX-208ENST00000587260 KRT26Q7Z3Y9 468 aa17.68■□□□□ 0.42
NFIX-208ENST00000587260 TTC6Q86TZ1 520 aa17.68■□□□□ 0.42
NFIX-208ENST00000587260 DHX36Q9H2U1 1008 aaKnown RBP17.68■□□□□ 0.42
NFIX-208ENST00000587260 FAM196BA6NMK8 535 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 E7EWF7 191 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 STOX1Q6ZVD7 989 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 LDHDQ86WU2 507 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 SLC44A5Q8NCS7 719 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
NFIX-208ENST00000587260 TEPSINQ96N21 525 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 GLIS2Q9BZE0 524 aaPredicted RBP17.67■□□□□ 0.42
NFIX-208ENST00000587260 NEDD4P46934 1319 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 HMGB1P09429 215 aaKnown RBP17.67■□□□□ 0.42
NFIX-208ENST00000587260 USP48Q86UV5 1035 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 CRACR2BQ8N4Y2 399 aaPredicted RBP17.67■□□□□ 0.42
NFIX-208ENST00000587260 NEK1Q96PY6 1258 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 INCENPQ9NQS7 918 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 PGAP2Q9UHJ9 254 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 PPP2R3BQ9Y5P8 575 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 TACC3Q9Y6A5 838 aa17.67■□□□□ 0.42
NFIX-208ENST00000587260 SSC5DA1L4H1 1573 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 PRDM1O75626 825 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 FGRP09769 529 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
NFIX-208ENST00000587260 NEK4P51957 841 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 NBPF12Q5TAG4 269 aaPredicted RBP17.66■□□□□ 0.42
NFIX-208ENST00000587260 RUFY3Q7L099 469 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 TRIM34Q9BYJ4 488 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 ALDH8A1Q9H2A2 487 aaPredicted RBP17.66■□□□□ 0.42
NFIX-208ENST00000587260 TOMM22Q9NS69 142 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 PI4KBQ9UBF8 816 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 SERPINB13Q9UIV8 391 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 CYP46A1Q9Y6A2 500 aa17.66■□□□□ 0.42
NFIX-208ENST00000587260 ATAD5Q96QE3 1844 aa17.65■□□□□ 0.42
NFIX-208ENST00000587260 ST18O60284 1047 aa17.65■□□□□ 0.42
NFIX-208ENST00000587260 SLC3A2P08195 630 aaKnown RBP17.65■□□□□ 0.42
NFIX-208ENST00000587260 PCP11498 1178 aaKnown RBP17.65■□□□□ 0.42
NFIX-208ENST00000587260 RRP12Q5JTH9 1297 aaKnown RBP17.65■□□□□ 0.42
NFIX-208ENST00000587260 AKNAD1Q5T1N1 836 aa17.65■□□□□ 0.42
NFIX-208ENST00000587260 STAG1Q8WVM7 1258 aa17.65■□□□□ 0.42
NFIX-208ENST00000587260 TTC14Q96N46 770 aa17.65■□□□□ 0.42
NFIX-208ENST00000587260 DNAJC18Q9H819 358 aa17.65■□□□□ 0.42
NFIX-208ENST00000587260 OTOFQ9HC10 1997 aa17.64■□□□□ 0.42
NFIX-208ENST00000587260 RPS6KB1P23443 525 aa17.64■□□□□ 0.41
NFIX-208ENST00000587260 BLOC1S2Q6QNY1 142 aa17.64■□□□□ 0.41
NFIX-208ENST00000587260 C16orf86Q6ZW13 317 aa17.64■□□□□ 0.41
NFIX-208ENST00000587260 MIGA2Q7L4E1 593 aa17.64■□□□□ 0.41
NFIX-208ENST00000587260 CDCA5Q96FF9 252 aa17.64■□□□□ 0.41
NFIX-208ENST00000587260 UPF3BQ9BZI7 483 aaKnown RBP17.64■□□□□ 0.41
NFIX-208ENST00000587260 EHD4Q9H223 541 aa17.64■□□□□ 0.41
NFIX-208ENST00000587260 RNF41Q9H4P4 317 aaPredicted RBP17.64■□□□□ 0.41
NFIX-208ENST00000587260 NT5C2P49902 561 aa17.63■□□□□ 0.41
NFIX-208ENST00000587260 GABPAQ06546 454 aa17.63■□□□□ 0.41
NFIX-208ENST00000587260 PDE4BQ07343 736 aa17.63■□□□□ 0.41
NFIX-208ENST00000587260 MFSD6Q6ZSS7 791 aa17.63■□□□□ 0.41
NFIX-208ENST00000587260 CDC37L1Q7L3B6 337 aa17.63■□□□□ 0.41
NFIX-208ENST00000587260 DHX32Q7L7V1 743 aaKnown RBP17.63■□□□□ 0.41
NFIX-208ENST00000587260 NCOA7Q8NI08 942 aa17.63■□□□□ 0.41
NFIX-208ENST00000587260 CNNM2Q9H8M5 875 aa17.63■□□□□ 0.41
NFIX-208ENST00000587260 TRAF5O00463 557 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 KIF3CO14782 793 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 CDK8P49336 464 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 MCM2P49736 904 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 EXOSC10Q01780 885 aaKnown RBP17.62■□□□□ 0.41
NFIX-208ENST00000587260 COL9A3Q14050 684 aaPredicted RBP17.62■□□□□ 0.41
NFIX-208ENST00000587260 BECN1Q14457 450 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 MB21D2Q8IYB1 491 aaPredicted RBP17.62■□□□□ 0.41
NFIX-208ENST00000587260 FBXL16Q8N461 479 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 IPO9Q96P70 1041 aaKnown RBP17.62■□□□□ 0.41
NFIX-208ENST00000587260 TBC1D2Q9BYX2 928 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.62■□□□□ 0.41
NFIX-208ENST00000587260 MKNK2Q9HBH9 465 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 FZD1Q9UP38 647 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.62■□□□□ 0.41
NFIX-208ENST00000587260 PAPPA2Q9BXP8 1791 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 WDR19Q8NEZ3 1342 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 B4E1Z4 1266 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 CD2BP2O95400 341 aaKnown RBP17.62■□□□□ 0.41
NFIX-208ENST00000587260 SHMT1P34896 483 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 FMR1Q06787 632 aaKnown RBP eCLIP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms