RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 DIP2BQ9P265 1576 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 EFCAB5A4FU69 1503 aa7.44□□□□□ -1.22
ZNF540-204ENST00000586792 A0A1W2PP55 124 aa7.44□□□□□ -1.22
ZNF540-204ENST00000586792 GLI1P08151 1106 aa7.44□□□□□ -1.22
ZNF540-204ENST00000586792 BUD31P41223 144 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-204ENST00000586792 ZP2Q05996 745 aa7.44□□□□□ -1.22
ZNF540-204ENST00000586792 ECM1Q16610 540 aa7.44□□□□□ -1.22
ZNF540-204ENST00000586792 AMIGO3Q86WK7 504 aa7.44□□□□□ -1.22
ZNF540-204ENST00000586792 GALNT12Q8IXK2 581 aa7.44□□□□□ -1.22
ZNF540-204ENST00000586792 CTNND2Q9UQB3 1225 aa7.44□□□□□ -1.22
ZNF540-204ENST00000586792 ZCCHC11Q5TAX3 1644 aaKnown RBP7.44□□□□□ -1.22
ZNF540-204ENST00000586792 ABCC10Q5T3U5 1492 aa7.43□□□□□ -1.22
ZNF540-204ENST00000586792 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-204ENST00000586792 IKZF1Q13422 519 aa7.43□□□□□ -1.22
ZNF540-204ENST00000586792 U3KQE9 123 aa7.43□□□□□ -1.22
ZNF540-204ENST00000586792 PLB1Q6P1J6 1458 aa7.43□□□□□ -1.22
ZNF540-204ENST00000586792 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-204ENST00000586792 RNGTTO60942 597 aaKnown RBP7.42□□□□□ -1.22
ZNF540-204ENST00000586792 LEFTY1O75610 366 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 FAM13AO94988 1023 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 POLR3DP05423 398 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-204ENST00000586792 C1QTNF9P0C862 333 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 LIG1P18858 919 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 GTF3C2Q8WUA4 911 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-204ENST00000586792 KRTAP9-3Q9BYQ3 159 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 ZNF576Q9H609 170 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 PRDM7Q9NQW5 492 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 PODXL2Q9NZ53 605 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 SLAIN2Q9P270 581 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 ASXL2Q76L83 1435 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 KDM5BQ9UGL1 1544 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 ABCA8O94911 1581 aa7.42□□□□□ -1.22
ZNF540-204ENST00000586792 NPR3P17342 541 aa7.41□□□□□ -1.22
ZNF540-204ENST00000586792 ITIH2P19823 946 aa7.41□□□□□ -1.22
ZNF540-204ENST00000586792 ITPKAP23677 461 aa7.41□□□□□ -1.22
ZNF540-204ENST00000586792 TMEM67Q5HYA8 995 aa7.41□□□□□ -1.22
ZNF540-204ENST00000586792 PRR23BQ6ZRT6 265 aa7.41□□□□□ -1.22
ZNF540-204ENST00000586792 C14orf37Q86TY3 774 aa7.41□□□□□ -1.22
ZNF540-204ENST00000586792 FBXO15Q8NCQ5 510 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-204ENST00000586792 DISC1Q9NRI5 854 aa7.41□□□□□ -1.22
ZNF540-204ENST00000586792 GTF2IRD1Q9UHL9 959 aa7.41□□□□□ -1.22
ZNF540-204ENST00000586792 RAPGEF6Q8TEU7 1601 aa7.41□□□□□ -1.22
ZNF540-204ENST00000586792 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.22
ZNF540-204ENST00000586792 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
ZNF540-204ENST00000586792 KIRREL1Q96J84 757 aa7.4□□□□□ -1.22
ZNF540-204ENST00000586792 TSPOAP1O95153 1857 aa7.4□□□□□ -1.23
ZNF540-204ENST00000586792 WDR7Q9Y4E6 1490 aa7.39□□□□□ -1.23
ZNF540-204ENST00000586792 FHOD3Q2V2M9 1422 aa7.39□□□□□ -1.23
ZNF540-204ENST00000586792 KIAA0319Q5VV43 1072 aa7.39□□□□□ -1.23
ZNF540-204ENST00000586792 GJD3Q8N144 294 aa7.39□□□□□ -1.23
ZNF540-204ENST00000586792 CCDC86Q9H6F5 360 aaKnown RBP7.39□□□□□ -1.23
ZNF540-204ENST00000586792 SSU72Q9NP77 194 aaKnown RBP7.39□□□□□ -1.23
ZNF540-204ENST00000586792 KRT82Q9NSB4 513 aa7.39□□□□□ -1.23
ZNF540-204ENST00000586792 KDM6BO15054 1643 aa7.38□□□□□ -1.23
ZNF540-204ENST00000586792 GLI2P10070 1586 aa7.38□□□□□ -1.23
ZNF540-204ENST00000586792 IGF2BP3O00425 579 aaKnown RBP eCLIP7.38□□□□□ -1.23
ZNF540-204ENST00000586792 NEFLP07196 543 aa7.38□□□□□ -1.23
ZNF540-204ENST00000586792 TMEM253P0C7T8 217 aa7.38□□□□□ -1.23
ZNF540-204ENST00000586792 CTSWP56202 376 aa7.38□□□□□ -1.23
ZNF540-204ENST00000586792 KIF4BQ2VIQ3 1234 aa7.38□□□□□ -1.23
ZNF540-204ENST00000586792 FYB2Q5VWT5 728 aa7.38□□□□□ -1.23
ZNF540-204ENST00000586792 CYFIP1Q7L576 1253 aa7.38□□□□□ -1.23
ZNF540-204ENST00000586792 WDR89Q96FK6 387 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-204ENST00000586792 HCLS1P14317 486 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-204ENST00000586792 RPS26P11Q5JNZ5 115 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-204ENST00000586792 TOP6BLQ8N6T0 577 aa7.37□□□□□ -1.23
ZNF540-204ENST00000586792 EHD4Q9H223 541 aa7.37□□□□□ -1.23
ZNF540-204ENST00000586792 EPRSP07814 1512 aaKnown RBP7.37□□□□□ -1.23
ZNF540-204ENST00000586792 TEX14Q8IWB6 1497 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 FMN1Q68DA7 1419 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 CFAP43Q8NDM7 1665 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 ARID3CA6NKF2 412 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 FZD6O60353 706 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 KRT1P04264 644 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 INHBBP09529 407 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 CIAPIN1Q6FI81 312 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.36□□□□□ -1.23
ZNF540-204ENST00000586792 HEXIM2Q96MH2 286 aaKnown RBP7.36□□□□□ -1.23
ZNF540-204ENST00000586792 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 PCDHGC5Q9Y5F6 944 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 HECW1Q76N89 1606 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 MAP3K4Q9Y6R4 1608 aa7.36□□□□□ -1.23
ZNF540-204ENST00000586792 NPIPB6E9PJ23 425 aa7.35□□□□□ -1.23
ZNF540-204ENST00000586792 ZNF862O60290 1169 aa7.35□□□□□ -1.23
ZNF540-204ENST00000586792 CLCN7P51798 805 aa7.35□□□□□ -1.23
ZNF540-204ENST00000586792 SF3B2Q13435 895 aaKnown RBP7.35□□□□□ -1.23
ZNF540-204ENST00000586792 KCNA10Q16322 511 aa7.35□□□□□ -1.23
ZNF540-204ENST00000586792 PBXIP1Q96AQ6 731 aa7.35□□□□□ -1.23
ZNF540-204ENST00000586792 ZC3H12CQ9C0D7 883 aaKnown RBP7.35□□□□□ -1.23
ZNF540-204ENST00000586792 GSTP1P09211 210 aaKnown RBP7.34□□□□□ -1.23
ZNF540-204ENST00000586792 MTMR3Q13615 1198 aa7.34□□□□□ -1.23
ZNF540-204ENST00000586792 SPACA3Q8IXA5 215 aa7.34□□□□□ -1.23
ZNF540-204ENST00000586792 CCDC120Q96HB5 630 aa7.34□□□□□ -1.23
ZNF540-204ENST00000586792 MTMR7Q9Y216 660 aa7.34□□□□□ -1.23
ZNF540-204ENST00000586792 NUP153P49790 1475 aaKnown RBP7.34□□□□□ -1.23
ZNF540-204ENST00000586792 ATP10BO94823 1461 aa7.33□□□□□ -1.24
ZNF540-204ENST00000586792 ARHGAP35Q9NRY4 1499 aa7.33□□□□□ -1.24
ZNF540-204ENST00000586792 GDNFP39905 211 aa7.33□□□□□ -1.24
ZNF540-204ENST00000586792 NSUN3Q9H649 340 aaKnown RBP7.33□□□□□ -1.24
ZNF540-204ENST00000586792 TCAF2A6NFQ2 919 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms