RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 SH2B2O14492 632 aaPredicted RBP10.03□□□□□ -0.8
NPC1-204ENST00000586718 IFIT3O14879 490 aaKnown RBP10.03□□□□□ -0.8
NPC1-204ENST00000586718 ENTPD3O75355 529 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 CYP2D6P10635 497 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 YBX3P16989 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
NPC1-204ENST00000586718 LMOD1P29536 600 aaPredicted RBP10.03□□□□□ -0.8
NPC1-204ENST00000586718 TNNI2P48788 182 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 EXOSC10Q01780 885 aaKnown RBP10.03□□□□□ -0.8
NPC1-204ENST00000586718 TNFAIP1Q13829 316 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 TOB2Q14106 344 aaPredicted RBP10.03□□□□□ -0.8
NPC1-204ENST00000586718 WTAPQ15007 396 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 SLC4A8Q2Y0W8 1093 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 CCDC178Q5BJE1 867 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 SYNE3Q6ZMZ3 975 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 NFXL1Q6ZNB6 911 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 GPC2Q8N158 579 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 FBXL16Q8N461 479 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 CRACR2BQ8N4Y2 399 aaPredicted RBP10.03□□□□□ -0.8
NPC1-204ENST00000586718 SPRYD3Q8NCJ5 442 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 DPF2Q92785 391 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 INTS4Q96HW7 963 aaKnown RBP10.03□□□□□ -0.8
NPC1-204ENST00000586718 LRRC2Q9BYS8 371 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 AGXT2Q9BYV1 514 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 MYOZ2Q9NPC6 264 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 SWAP70Q9UH65 585 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.03□□□□□ -0.8
NPC1-204ENST00000586718 SIPA1L1O43166 1804 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 ATRNL1Q5VV63 1379 aa10.02□□□□□ -0.8
NPC1-204ENST00000586718 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 CCDC69A6NI79 296 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 H7C1D1 291 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 PRDM1O75626 825 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 TSPY3P0CV98 308 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 TSPY8P0CW00 308 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 ANTXR2P58335 489 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 ZNF280AP59817 542 aaPredicted RBP10.02□□□□□ -0.81
NPC1-204ENST00000586718 CUL4AQ13619 759 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 FKBP1CQ5VVH2 108 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 C16orf86Q6ZW13 317 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 CHST3Q7LGC8 479 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 MICALL2Q8IY33 904 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 EHD4Q9H223 541 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 TDRD3Q9H7E2 651 aaKnown RBP10.02□□□□□ -0.81
NPC1-204ENST00000586718 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
NPC1-204ENST00000586718 DDX4Q9NQI0 724 aaKnown RBP10.02□□□□□ -0.81
NPC1-204ENST00000586718 SERPINB13Q9UIV8 391 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 TPCN1Q9ULQ1 816 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
NPC1-204ENST00000586718 KIF3AQ9Y496 699 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 TNKSO95271 1327 aa10.02□□□□□ -0.81
NPC1-204ENST00000586718 PLIN4Q96Q06 1357 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 CLRN2A0PK11 232 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 DHX16O60231 1041 aaKnown RBP10.01□□□□□ -0.81
NPC1-204ENST00000586718 FGRP09769 529 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 LIFRP42702 1097 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 PRELPP51888 382 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 CACNB3P54284 484 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 APOBRQ0VD83 1088 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 NFIAQ12857 509 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 KIF4BQ2VIQ3 1234 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 IFIT1BQ5T764 474 aaKnown RBP10.01□□□□□ -0.81
NPC1-204ENST00000586718 C9orf131Q5VYM1 1079 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 CPLX2Q6PUV4 134 aaKnown RBP10.01□□□□□ -0.81
NPC1-204ENST00000586718 CYB5R4Q7L1T6 521 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 CCDC83Q8IWF9 413 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 ZNF444Q8N0Y2 327 aaPredicted RBP10.01□□□□□ -0.81
NPC1-204ENST00000586718 TMTC2Q8N394 836 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 GTF3C6Q969F1 213 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 ZNF274Q96GC6 653 aaPredicted RBP10.01□□□□□ -0.81
NPC1-204ENST00000586718 PRMT6Q96LA8 375 aaPredicted RBP10.01□□□□□ -0.81
NPC1-204ENST00000586718 ZSCAN10Q96SZ4 725 aaPredicted RBP10.01□□□□□ -0.81
NPC1-204ENST00000586718 FOXD4L1Q9NU39 408 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 CHMP5Q9NZZ3 219 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 ZNF70Q9UC06 446 aaPredicted RBP10.01□□□□□ -0.81
NPC1-204ENST00000586718 SMC3Q9UQE7 1217 aa10.01□□□□□ -0.81
NPC1-204ENST00000586718 ZBTB43O43298 467 aa10□□□□□ -0.81
NPC1-204ENST00000586718 PFKFB2O60825 505 aa10□□□□□ -0.81
NPC1-204ENST00000586718 CDKL5O76039 1030 aa10□□□□□ -0.81
NPC1-204ENST00000586718 LARGE1O95461 756 aa10□□□□□ -0.81
NPC1-204ENST00000586718 METAP2P50579 478 aaKnown RBP eCLIP10□□□□□ -0.81
NPC1-204ENST00000586718 PLCD1P51178 756 aa10□□□□□ -0.81
NPC1-204ENST00000586718 RCAN1P53805 252 aa10□□□□□ -0.81
NPC1-204ENST00000586718 TCP10Q12799 353 aa10□□□□□ -0.81
NPC1-204ENST00000586718 STK3Q13188 491 aa10□□□□□ -0.81
NPC1-204ENST00000586718 ME3Q16798 604 aa10□□□□□ -0.81
NPC1-204ENST00000586718 FAM83AQ86UY5 434 aa10□□□□□ -0.81
NPC1-204ENST00000586718 SGMS1Q86VZ5 419 aa10□□□□□ -0.81
NPC1-204ENST00000586718 APOBEC3FQ8IUX4 373 aaKnown RBP10□□□□□ -0.81
NPC1-204ENST00000586718 FAM151AQ8WW52 585 aa10□□□□□ -0.81
NPC1-204ENST00000586718 DYNLL2Q96FJ2 89 aa10□□□□□ -0.81
NPC1-204ENST00000586718 LY9Q9HBG7 655 aa10□□□□□ -0.81
NPC1-204ENST00000586718 ZSWIM5Q9P217 1185 aa10□□□□□ -0.81
NPC1-204ENST00000586718 PI4KBQ9UBF8 816 aa10□□□□□ -0.81
NPC1-204ENST00000586718 FAM198AQ9UFP1 575 aa10□□□□□ -0.81
NPC1-204ENST00000586718 CNOT7Q9UIV1 285 aaKnown RBP10□□□□□ -0.81
NPC1-204ENST00000586718 PCDHAC2Q9Y5I4 1007 aa10□□□□□ -0.81
NPC1-204ENST00000586718 SLC12A7Q9Y666 1083 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms