RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 STRBPQ96SI9 672 aaKnown RBP13.6□□□□□ -0.23
ERBB2-218ENST00000584450 ZMYM6O95789 1325 aa13.6□□□□□ -0.23
ERBB2-218ENST00000584450 GOLGA8HP0CJ92 632 aa13.6□□□□□ -0.23
ERBB2-218ENST00000584450 CDC27P30260 824 aa13.6□□□□□ -0.23
ERBB2-218ENST00000584450 IL6STP40189 918 aaPredicted RBP13.6□□□□□ -0.23
ERBB2-218ENST00000584450 MTIF2P46199 727 aaKnown RBP13.6□□□□□ -0.23
ERBB2-218ENST00000584450 NAPAP54920 295 aa13.6□□□□□ -0.23
ERBB2-218ENST00000584450 TFAP4Q01664 338 aa13.6□□□□□ -0.23
ERBB2-218ENST00000584450 GPS2Q13227 327 aa13.6□□□□□ -0.23
ERBB2-218ENST00000584450 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
ERBB2-218ENST00000584450 SMYD4Q8IYR2 804 aaPredicted RBP13.6□□□□□ -0.23
ERBB2-218ENST00000584450 TCP11L1Q9NUJ3 509 aa13.6□□□□□ -0.23
ERBB2-218ENST00000584450 SRP68Q9UHB9 627 aaKnown RBP13.6□□□□□ -0.23
ERBB2-218ENST00000584450 KIF2AO00139 706 aaPredicted RBP13.6□□□□□ -0.23
ERBB2-218ENST00000584450 KIF5CO60282 957 aa13.6□□□□□ -0.23
ERBB2-218ENST00000584450 GPR101Q96P66 508 aaPredicted RBP13.6□□□□□ -0.23
ERBB2-218ENST00000584450 CUTAO60888 179 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 CASP1P29466 404 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 POSTNQ15063 836 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 LETM2Q2VYF4 491 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 CCDC144BQ3MJ40 725 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 HSP90B2PQ58FF3 399 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 TDRD7Q8NHU6 1098 aaKnown RBP13.59□□□□□ -0.23
ERBB2-218ENST00000584450 SLU7O95391 586 aaKnown RBP13.59□□□□□ -0.23
ERBB2-218ENST00000584450 CTDNEP1O95476 244 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 CMA1P23946 247 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 ELF2Q15723 593 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 KANK3Q6NY19 840 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 TGFBRAP1Q8WUH2 860 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 GPKOWQ92917 476 aaPredicted RBP eCLIP13.59□□□□□ -0.23
ERBB2-218ENST00000584450 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
ERBB2-218ENST00000584450 DESI2Q9BSY9 194 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 UBA5Q9GZZ9 404 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 MED23Q9ULK4 1368 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 NEDD4P46934 1319 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 SLC39A14Q15043 492 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 RASGRP4Q8TDF6 673 aa13.59□□□□□ -0.23
ERBB2-218ENST00000584450 PUF60Q9UHX1 559 aaKnown RBP13.59□□□□□ -0.23
ERBB2-218ENST00000584450 KIF28PB7ZC32 967 aa13.58□□□□□ -0.24
ERBB2-218ENST00000584450 LDHCP07864 332 aa13.58□□□□□ -0.24
ERBB2-218ENST00000584450 CYP19A1P11511 503 aaPredicted RBP13.58□□□□□ -0.24
ERBB2-218ENST00000584450 DRC1Q96MC2 740 aa13.58□□□□□ -0.24
ERBB2-218ENST00000584450 SH2B2O14492 632 aaPredicted RBP13.58□□□□□ -0.24
ERBB2-218ENST00000584450 SPTY2D1Q68D10 685 aaPredicted RBP13.58□□□□□ -0.24
ERBB2-218ENST00000584450 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.58□□□□□ -0.24
ERBB2-218ENST00000584450 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
ERBB2-218ENST00000584450 ZNF215Q9UL58 517 aaPredicted RBP13.58□□□□□ -0.24
ERBB2-218ENST00000584450 EXOSC10Q01780 885 aaKnown RBP13.57□□□□□ -0.24
ERBB2-218ENST00000584450 ZNF287Q9HBT7 754 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 RIPOR2Q9Y4F9 1068 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 MEGF6O75095 1541 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 TTC38Q5R3I4 469 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 BAG1Q99933 345 aaPredicted RBP13.57□□□□□ -0.24
ERBB2-218ENST00000584450 CGNQ9P2M7 1197 aaKnown RBP13.57□□□□□ -0.24
ERBB2-218ENST00000584450 PCDHB6Q9Y5E3 794 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 UTYO14607 1347 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 AP5Z1O43299 807 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 UFL1O94874 794 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 ASIC1P78348 528 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 CCDC70Q6NSX1 233 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 CTNND2Q9UQB3 1225 aa13.57□□□□□ -0.24
ERBB2-218ENST00000584450 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.57□□□□□ -0.24
ERBB2-218ENST00000584450 MB21D2Q8IYB1 491 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-218ENST00000584450 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.56□□□□□ -0.24
ERBB2-218ENST00000584450 RTL9Q8NET4 1388 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 GUCY1A2P33402 732 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 MATR3P43243 847 aaKnown RBP eCLIP13.56□□□□□ -0.24
ERBB2-218ENST00000584450 TNNI2P48788 182 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 JAKMIP3Q5VZ66 844 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 IQUBQ8NA54 791 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 CCDC43Q96MW1 224 aaKnown RBP13.56□□□□□ -0.24
ERBB2-218ENST00000584450 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 FAM170AA1A519 330 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 FDPSP14324 419 aaKnown RBP13.56□□□□□ -0.24
ERBB2-218ENST00000584450 TRIM21P19474 475 aaKnown RBP13.56□□□□□ -0.24
ERBB2-218ENST00000584450 TSGA10IPQ3SY00 556 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 CNBD1Q8NA66 436 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 SMARCC2Q8TAQ2 1214 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 UBE2Q2Q8WVN8 375 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 CARD6Q9BX69 1037 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
ERBB2-218ENST00000584450 KDM6AO15550 1401 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-218ENST00000584450 TNS3Q68CZ2 1445 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 FOXN1O15353 648 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 NMT2O60551 498 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 ZNF76P36508 570 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 DTHD1Q6ZMT9 781 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 KRBA2Q6ZNG9 492 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 IGSF22Q8N9C0 903 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-218ENST00000584450 CSRNP2Q9H175 543 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 POLR3EQ9NVU0 708 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 CTDP1Q9Y5B0 961 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-218ENST00000584450 BAZ2BQ9UIF8 2168 aaKnown RBP13.55□□□□□ -0.24
ERBB2-218ENST00000584450 TOM1O60784 492 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms