RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 MKRN1Q9UHC7 482 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 STX6O43752 255 aa14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 PRELPP51888 382 aa14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 PSMD14O00487 310 aa14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 RXRAP19793 462 aa14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 APOBEC3HQ6NTF7 200 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SLC44A5Q8NCS7 719 aa14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ATP8A2Q9NTI2 1148 aa14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 VPS37CA5D8V6 355 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 CRKP46108 304 aa14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 FAM163AQ96GL9 167 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 TAOK3Q9H2K8 898 aa14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 DDX4Q9NQI0 724 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 GAKO14976 1311 aa14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ZMYM6O95789 1325 aa14.88□□□□□ -0.03
CDK5RAP3-217ENST00000580287 IARSP41252 1262 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 NFIAQ12857 509 aa14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 STAG1Q8WVM7 1258 aa14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 USP40Q9NVE5 1235 aa14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ZSCAN22P10073 491 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SCRN1Q12765 414 aa14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ANKRD1Q15327 319 aa14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 FAM47AQ5JRC9 791 aa14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 TEKT1Q969V4 418 aa14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 MYL10Q9BUA6 226 aa14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 BAZ2AQ9UIF9 1905 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-217ENST00000580287 RANBP6O60518 1105 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 JAK2O60674 1132 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 TCHHQ07283 1943 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 CDC42EP5Q6NZY7 148 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ZFPM1Q8IX07 1006 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 CCDC144CPQ8IYA2 1237 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ALDH8A1Q9H2A2 487 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 FLT1P17948 1338 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SHTN1A0MZ66 631 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 NMT2O60551 498 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 IGDCC4Q8TDY8 1250 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 CHMP4CQ96CF2 233 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 AGXT2Q9BYV1 514 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
CDK5RAP3-217ENST00000580287 KLF18A0A0U1RQI7 1052 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 WDHD1O75717 1129 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 POLR3DP05423 398 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 PDIA3P30101 505 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ZNF445P59923 1031 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 CXCL9Q07325 125 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 TCP10Q12799 353 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 C12orf60Q5U649 245 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 GIMAP6Q6P9H5 292 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SLF2Q8IX21 1173 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 NIM1KQ8IY84 436 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ANAPC4Q9UJX5 808 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 CNPY2Q9Y2B0 182 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 KIAA1551Q9HCM1 1747 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 KIF13BQ9NQT8 1826 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 IFIT3O14879 490 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 USP48Q86UV5 1035 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 DDX11Q96FC9 970 aa14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SCAF8Q9UPN6 1271 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-217ENST00000580287 MBD3O95983 291 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 TMEM67Q5HYA8 995 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 PRMT6Q96LA8 375 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ZNRF3Q9ULT6 936 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 DLEC1Q9Y238 1755 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 CCDC88AQ3V6T2 1871 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 LAMA4Q16363 1823 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 FIBPO43427 364 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 F13A1P00488 732 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SOGA3Q5TF21 947 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ZMYND15Q9H091 742 aa14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 TDRD3Q9H7E2 651 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ADAMTSL1Q8N6G6 1762 aa14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SH2B2O14492 632 aaPredicted RBP14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 LARP1BQ659C4 914 aaKnown RBP14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 RSBN1LQ6PCB5 846 aaPredicted RBP14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 HHIPL2Q6UWX4 724 aa14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 GTF3C6Q969F1 213 aa14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 KRT23Q9C075 422 aa14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ARPP21Q9UBL0 812 aaPredicted RBP14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 ANGEL1Q9UNK9 670 aaKnown RBP14.83□□□□□ -0.03
CDK5RAP3-217ENST00000580287 FOSBP53539 338 aa14.83□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CFAP100Q494V2 611 aa14.83□□□□□ -0.04
CDK5RAP3-217ENST00000580287 GRIPAP1Q4V328 841 aa14.83□□□□□ -0.04
CDK5RAP3-217ENST00000580287 JDP2Q8WYK2 163 aa14.83□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CNNM2Q9H8M5 875 aa14.83□□□□□ -0.04
CDK5RAP3-217ENST00000580287 LY9Q9HBG7 655 aa14.83□□□□□ -0.04
CDK5RAP3-217ENST00000580287 HPS5Q9UPZ3 1129 aa14.83□□□□□ -0.04
CDK5RAP3-217ENST00000580287 GOLGA8BA8MQT2 603 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 CTDNEP1O95476 244 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 VIL1P09327 827 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SBK1Q52WX2 424 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 NFXL1Q6ZNB6 911 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 FERMT3Q86UX7 667 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 MICU3Q86XE3 530 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ZDHHC15Q96MV8 337 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 SYT17Q9BSW7 474 aa14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 RNF41Q9H4P4 317 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-217ENST00000580287 ATP6V1DQ9Y5K8 247 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms