RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 DTWD1Q8N5C7 304 aa9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 IL22RA1Q8N6P7 574 aa9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 BIN2Q9UBW5 565 aaPredicted RBP9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 TRIM33Q9UPN9 1127 aa9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 SOWAHDA6NJG2 315 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 ELNP15502 786 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 CHRNA4P43681 627 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 GRIK4Q16099 956 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 ECM1Q16610 540 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 CD163Q86VB7 1156 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 FMR1NBQ8N0W7 255 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 CEP120Q8N960 986 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 TMC1Q8TDI8 760 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 TRAIPQ9BWF2 469 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 RASSF4Q9H2L5 321 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 SALL4Q9UJQ4 1053 aa9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 FOXD3Q9UJU5 478 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-216ENST00000580283 SSH2Q76I76 1423 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 DLC1Q96QB1 1528 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 NEFLP07196 543 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 KCNA1Q09470 495 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 CITED4Q96RK1 184 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 SPOCK3Q9BQ16 436 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 PBX4Q9BYU1 374 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 LACRTQ9GZZ8 138 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 CHRDQ9H2X0 955 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
PPP4R1-216ENST00000580283 EREGO14944 169 aa9.47□□□□□ -0.89
PPP4R1-216ENST00000580283 ITGB2P05107 769 aa9.47□□□□□ -0.89
PPP4R1-216ENST00000580283 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
PPP4R1-216ENST00000580283 MUC3BQ9H195 1237 aa9.47□□□□□ -0.89
PPP4R1-216ENST00000580283 DHX57Q6P158 1386 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-216ENST00000580283 SHANK3Q9BYB0 1731 aa9.46□□□□□ -0.89
PPP4R1-216ENST00000580283 C9orf172C9J069 976 aa9.46□□□□□ -0.9
PPP4R1-216ENST00000580283 EDN3P14138 238 aa9.46□□□□□ -0.9
PPP4R1-216ENST00000580283 PTPRAP18433 802 aa9.46□□□□□ -0.9
PPP4R1-216ENST00000580283 TCP11L2Q8N4U5 519 aa9.46□□□□□ -0.9
PPP4R1-216ENST00000580283 IVNS1ABPQ9Y6Y0 642 aa9.46□□□□□ -0.9
PPP4R1-216ENST00000580283 TULP4Q9NRJ4 1543 aa9.46□□□□□ -0.9
PPP4R1-216ENST00000580283 ADGRB1O14514 1584 aa9.46□□□□□ -0.9
PPP4R1-216ENST00000580283 RGPD5Q99666 1765 aa9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 WNK3Q9BYP7 1800 aa9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 PATL2C9JE40 543 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 CDC27P30260 824 aa9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 EVA1CP58658 441 aa9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 FBXO11Q86XK2 927 aa9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 ZFYVE28Q9HCC9 887 aa9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 LRRC37A3O60309 1634 aa9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
PPP4R1-216ENST00000580283 GATA4P43694 442 aa9.44□□□□□ -0.9
PPP4R1-216ENST00000580283 NGDNQ8NEJ9 315 aaKnown RBP9.44□□□□□ -0.9
PPP4R1-216ENST00000580283 DCAF11Q8TEB1 546 aa9.44□□□□□ -0.9
PPP4R1-216ENST00000580283 SRA1Q9HD15 236 aaKnown RBP9.44□□□□□ -0.9
PPP4R1-216ENST00000580283 POGKQ9P215 609 aa9.44□□□□□ -0.9
PPP4R1-216ENST00000580283 ATP7BP35670 1465 aa9.44□□□□□ -0.9
PPP4R1-216ENST00000580283 COL24A1Q17RW2 1714 aa9.44□□□□□ -0.9
PPP4R1-216ENST00000580283 COL18A1P39060 1754 aa9.44□□□□□ -0.9
PPP4R1-216ENST00000580283 AKAP12Q02952 1782 aa9.44□□□□□ -0.9
PPP4R1-216ENST00000580283 PROCP04070 461 aa9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 ACPPP15309 386 aa9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 NRG1Q02297 640 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 SLC15A2Q16348 729 aa9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 FAM117BQ6P1L5 589 aa9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 MAP4K3Q8IVH8 894 aa9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 MARCH10Q8NA82 808 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 FAM129BQ96TA1 746 aa9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 POP1Q99575 1024 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 OSMRQ99650 979 aa9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 DZANK1Q9NVP4 752 aa9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 TRAK1Q9UPV9 953 aa9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 THRAP3Q9Y2W1 955 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-216ENST00000580283 COL5A2P05997 1499 aaPredicted RBP9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 OVOS2A0A0G2JMS6 1433 aa9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 OVOS2A0A0J9YW53 1432 aa9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 OVOS2Q6IE36 1432 aa9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 CPDO75976 1380 aa9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 LINC01387J3KSC0 135 aa9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 PDE2AO00408 941 aaPredicted RBP9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 SELPP16109 830 aa9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 CABP4P57796 275 aa9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 SHISA2Q6UWI4 295 aa9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 LENG1Q96BZ8 264 aaPredicted RBP9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 TOPAZ1Q8N9V7 1692 aa9.42□□□□□ -0.9
PPP4R1-216ENST00000580283 TRPA1O75762 1119 aa9.41□□□□□ -0.9
PPP4R1-216ENST00000580283 POLR3DP05423 398 aaPredicted RBP9.41□□□□□ -0.9
PPP4R1-216ENST00000580283 CDC25BP30305 580 aa9.41□□□□□ -0.9
PPP4R1-216ENST00000580283 TXNRD1Q16881 649 aa9.41□□□□□ -0.9
PPP4R1-216ENST00000580283 DMRTB1Q96MA1 342 aa9.41□□□□□ -0.9
PPP4R1-216ENST00000580283 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
PPP4R1-216ENST00000580283 KAT6BQ8WYB5 2073 aa9.41□□□□□ -0.9
PPP4R1-216ENST00000580283 ARHGEF28Q8N1W1 1705 aaKnown RBP9.4□□□□□ -0.9
PPP4R1-216ENST00000580283 USP19O94966 1318 aa9.4□□□□□ -0.9
PPP4R1-216ENST00000580283 DEAF1O75398 565 aaPredicted RBP9.4□□□□□ -0.9
PPP4R1-216ENST00000580283 MAPK1P28482 360 aa9.4□□□□□ -0.9
PPP4R1-216ENST00000580283 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms