RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 TET3O43151 1660 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 TXKP42681 527 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 PAK1Q13153 545 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 FAM212AQ96EL1 285 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 IFT74Q96LB3 600 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 NUP58Q9BVL2 599 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 PABPN1LA6NDY0 278 aaKnown RBP17.03■□□□□ 0.32
ITGB4-206ENST00000579662 TFAP4Q01664 338 aa17.03■□□□□ 0.32
ITGB4-206ENST00000579662 KDM6BO15054 1643 aa17.03■□□□□ 0.32
ITGB4-206ENST00000579662 ZNF569Q5MCW4 686 aa17.03■□□□□ 0.32
ITGB4-206ENST00000579662 POLR2DO15514 142 aaKnown RBP17.03■□□□□ 0.32
ITGB4-206ENST00000579662 TNNC1P63316 161 aa17.03■□□□□ 0.32
ITGB4-206ENST00000579662 NSRP1Q9H0G5 558 aaKnown RBP17.03■□□□□ 0.32
ITGB4-206ENST00000579662 FNBP1Q96RU3 617 aa17.03■□□□□ 0.32
ITGB4-206ENST00000579662 CDK12Q9NYV4 1490 aaPredicted RBP17.03■□□□□ 0.32
ITGB4-206ENST00000579662 A0A1W2PRG0 241 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 ARHGEF35A5YM69 484 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 ARID4AP29374 1257 aaPredicted RBP17.02■□□□□ 0.32
ITGB4-206ENST00000579662 TBC1D8BQ0IIM8 1120 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 COPRSQ9NQ92 184 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 ADCY10Q96PN6 1610 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 CETN3O15182 167 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 APBA3O96018 575 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 TUBB2AQ13885 445 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 RAPGEF1Q13905 1077 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 GSTA5Q7RTV2 222 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
ITGB4-206ENST00000579662 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 TUBB2BQ9BVA1 445 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 NDUFB9Q9Y6M9 179 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 LZTFL1Q9NQ48 299 aa17.02■□□□□ 0.32
ITGB4-206ENST00000579662 ZNF202O95125 648 aa17.02■□□□□ 0.31
ITGB4-206ENST00000579662 PCP11498 1178 aaKnown RBP17.02■□□□□ 0.31
ITGB4-206ENST00000579662 SNX29Q8TEQ0 813 aa17.02■□□□□ 0.31
ITGB4-206ENST00000579662 EAF2Q96CJ1 260 aaPredicted RBP17.02■□□□□ 0.31
ITGB4-206ENST00000579662 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.31
ITGB4-206ENST00000579662 TMEM110-MUSTN1A8MSY1 372 aa17.02■□□□□ 0.31
ITGB4-206ENST00000579662 GSPT1P15170 499 aaKnown RBP17.02■□□□□ 0.31
ITGB4-206ENST00000579662 DLGAP5Q15398 846 aa17.02■□□□□ 0.31
ITGB4-206ENST00000579662 CALCRLQ16602 461 aa17.02■□□□□ 0.31
ITGB4-206ENST00000579662 CCDC50Q8IVM0 306 aa17.02■□□□□ 0.31
ITGB4-206ENST00000579662 MTUS1Q9ULD2 1270 aa17.02■□□□□ 0.31
ITGB4-206ENST00000579662 KARSQ15046 597 aaKnown RBP17.01■□□□□ 0.31
ITGB4-206ENST00000579662 CYP26C1Q6V0L0 522 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 CSGALNACT2Q8N6G5 542 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 PHKBQ93100 1093 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 IQCGQ9H095 443 aaKnown RBP17.01■□□□□ 0.31
ITGB4-206ENST00000579662 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
ITGB4-206ENST00000579662 TTF2Q9UNY4 1162 aaKnown RBP17.01■□□□□ 0.31
ITGB4-206ENST00000579662 CHMP2AO43633 222 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 BRDTQ58F21 947 aaPredicted RBP17.01■□□□□ 0.31
ITGB4-206ENST00000579662 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 PPP1R14CQ8TAE6 165 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 MYL10Q9BUA6 226 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 IMPACTQ9P2X3 320 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 CHD1O14646 1710 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 SP4Q02446 784 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 ZNF654Q8IZM8 581 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 BAG6P46379 1132 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 ZNF445P59923 1031 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 NCAPH2Q6IBW4 605 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 IFNL3Q8IZI9 196 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
ITGB4-206ENST00000579662 PKD2L1Q9P0L9 805 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 DNM3Q9UQ16 869 aa17.01■□□□□ 0.31
ITGB4-206ENST00000579662 PDE6AP16499 860 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 STRN3Q13033 797 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 CCDC122Q5T0U0 273 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
ITGB4-206ENST00000579662 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
ITGB4-206ENST00000579662 POSTNQ15063 836 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 MFSD14BQ5SR56 506 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 USP40Q9NVE5 1235 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 ATP10DQ9P241 1426 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 SEMA3EO15041 775 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 FERP16591 822 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 STAP2Q9UGK3 403 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 WWC3Q9ULE0 1092 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17■□□□□ 0.31
ITGB4-206ENST00000579662 ABCC3O15438 1527 aa17■□□□□ 0.31
ITGB4-206ENST00000579662 NAP1L3Q99457 506 aaPredicted RBP17■□□□□ 0.31
ITGB4-206ENST00000579662 PFKFB2O60825 505 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 TNFAIP1Q13829 316 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 SEL1L2Q5TEA6 688 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 IQCDQ96DY2 449 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 ZMYM6O95789 1325 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 A0A0D9SFI3 127 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 BRD1O95696 1058 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 GJC1P36383 396 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 FANCCQ00597 558 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 UBE3CQ15386 1083 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 CDAN1Q8IWY9 1227 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 NT5C3AQ9H0P0 336 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 ZSWIM6Q9HCJ5 1215 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 ATP8A2Q9NTI2 1148 aa16.99■□□□□ 0.31
ITGB4-206ENST00000579662 MTRF1LQ9UGC7 380 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms