RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 TTLL4Q14679 1199 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 KIF4BQ2VIQ3 1234 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 PDZD3Q86UT5 571 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 TP53INP2Q8IXH6 220 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 SMYD4Q8IYR2 804 aaPredicted RBP6.5□□□□□ -1.37
TOP2A-204ENST00000578412 ACSBG1Q96GR2 724 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 OSBPL7Q9BZF2 842 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 SSU72Q9NP77 194 aaKnown RBP6.5□□□□□ -1.37
TOP2A-204ENST00000578412 KRT82Q9NSB4 513 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 BSDC1Q9NW68 430 aaPredicted RBP6.5□□□□□ -1.37
TOP2A-204ENST00000578412 ZC3H7BQ9UGR2 993 aaKnown RBP6.5□□□□□ -1.37
TOP2A-204ENST00000578412 KDM5BQ9UGL1 1544 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 POGZQ7Z3K3 1410 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 SYNGAP1Q96PV0 1343 aa6.5□□□□□ -1.37
TOP2A-204ENST00000578412 ADAMTSL3P82987 1691 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 FAM87AP0C7U9 286 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 NME2P22392 152 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 GSTT1P30711 240 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 HNRNPUQ00839 825 aaKnown RBP eCLIP6.49□□□□□ -1.37
TOP2A-204ENST00000578412 KCNA1Q09470 495 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 OGFOD3Q6PK18 319 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 MPRIPQ6WCQ1 1025 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 ABI1Q8IZP0 508 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 C3orf58Q8NDZ4 430 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 KIF21BO75037 1637 aa6.49□□□□□ -1.37
TOP2A-204ENST00000578412 WDR7Q9Y4E6 1490 aa6.48□□□□□ -1.37
TOP2A-204ENST00000578412 FMR1Q06787 632 aaKnown RBP eCLIP6.48□□□□□ -1.376e-11■■■■■ 41.8
TOP2A-204ENST00000578412 GRIN3AQ8TCU5 1115 aa6.48□□□□□ -1.37
TOP2A-204ENST00000578412 GPBAR1Q8TDU6 330 aa6.48□□□□□ -1.37
TOP2A-204ENST00000578412 ASB16Q96NS5 453 aa6.48□□□□□ -1.37
TOP2A-204ENST00000578412 NECAB3Q96P71 396 aaPredicted RBP6.48□□□□□ -1.37
TOP2A-204ENST00000578412 EMILIN2Q9BXX0 1053 aa6.48□□□□□ -1.37
TOP2A-204ENST00000578412 PCDHGC5Q9Y5F6 944 aa6.48□□□□□ -1.37
TOP2A-204ENST00000578412 CSADQ9Y600 493 aa6.48□□□□□ -1.37
TOP2A-204ENST00000578412 ARAP3Q8WWN8 1544 aa6.48□□□□□ -1.37
TOP2A-204ENST00000578412 PAX4O43316 350 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 PAGE1O75459 146 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 ATP2B2Q01814 1243 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 CYP27C1Q4G0S4 372 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 ALG1LQ6GMV1 187 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 VSIG10LQ86VR7 867 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 FAM181AQ8N9Y4 354 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 FLCNQ8NFG4 579 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 FBF1Q8TES7 1133 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 PODXL2Q9NZ53 605 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 ADGRE2Q9UHX3 823 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 BIVM-ERCC5R4GMW8 1640 aa6.47□□□□□ -1.37
TOP2A-204ENST00000578412 CFAP43Q8NDM7 1665 aa6.46□□□□□ -1.37
TOP2A-204ENST00000578412 LEFTY1O75610 366 aa6.46□□□□□ -1.38
TOP2A-204ENST00000578412 PRNPP04156 253 aa6.46□□□□□ -1.38
TOP2A-204ENST00000578412 NEFMP07197 916 aa6.46□□□□□ -1.38
TOP2A-204ENST00000578412 ZC3H12AQ5D1E8 599 aaKnown RBP6.46□□□□□ -1.38
TOP2A-204ENST00000578412 NFXL1Q6ZNB6 911 aa6.46□□□□□ -1.38
TOP2A-204ENST00000578412 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
TOP2A-204ENST00000578412 FBXL18Q96ME1 805 aa6.46□□□□□ -1.38
TOP2A-204ENST00000578412 PICK1Q9NRD5 415 aa6.46□□□□□ -1.38
TOP2A-204ENST00000578412 PCOLCE2Q9UKZ9 415 aa6.46□□□□□ -1.38
TOP2A-204ENST00000578412 YEATS2Q9ULM3 1422 aa6.46□□□□□ -1.38
TOP2A-204ENST00000578412 DCDC2CA8MYV0 355 aa6.45□□□□□ -1.38
TOP2A-204ENST00000578412 ENC1O14682 589 aa6.45□□□□□ -1.38
TOP2A-204ENST00000578412 P4HBP07237 508 aaKnown RBP6.45□□□□□ -1.38
TOP2A-204ENST00000578412 BMP6P22004 513 aa6.45□□□□□ -1.38
TOP2A-204ENST00000578412 ZNF252P-AS1Q0IIN9 211 aa6.45□□□□□ -1.38
TOP2A-204ENST00000578412 ISL2Q96A47 359 aa6.45□□□□□ -1.38
TOP2A-204ENST00000578412 CEP44Q9C0F1 390 aa6.45□□□□□ -1.38
TOP2A-204ENST00000578412 SPG7Q9UQ90 795 aa6.45□□□□□ -1.38
TOP2A-204ENST00000578412 SAMM50Q9Y512 469 aa6.45□□□□□ -1.38
TOP2A-204ENST00000578412 ZCCHC11Q5TAX3 1644 aaKnown RBP6.44□□□□□ -1.38
TOP2A-204ENST00000578412 LDHBP07195 334 aaKnown RBP6.44□□□□□ -1.38
TOP2A-204ENST00000578412 RANGAP1P46060 587 aaPredicted RBP6.44□□□□□ -1.38
TOP2A-204ENST00000578412 PPM1JQ5JR12 505 aa6.44□□□□□ -1.38
TOP2A-204ENST00000578412 RASIP1Q5U651 963 aa6.44□□□□□ -1.38
TOP2A-204ENST00000578412 ZNF574Q6ZN55 896 aaPredicted RBP6.44□□□□□ -1.38
TOP2A-204ENST00000578412 ARHGAP27Q6ZUM4 889 aa6.44□□□□□ -1.38
TOP2A-204ENST00000578412 C12orf40Q86WS4 652 aa6.44□□□□□ -1.38
TOP2A-204ENST00000578412 PLD6Q8N2A8 252 aaKnown RBP6.44□□□□□ -1.38
TOP2A-204ENST00000578412 FMNL2Q96PY5 1086 aa6.44□□□□□ -1.38
TOP2A-204ENST00000578412 SRCIN1Q9C0H9 1055 aa6.44□□□□□ -1.38
TOP2A-204ENST00000578412 IQSEC2Q5JU85 1478 aa6.44□□□□□ -1.38
TOP2A-204ENST00000578412 BCORL1Q5H9F3 1711 aa6.44□□□□□ -1.38
TOP2A-204ENST00000578412 KIF27Q86VH2 1401 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 RAPGEF3O95398 923 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 CELA3AP09093 270 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 USP17L7P0C7H9 530 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 ERVK-24P63145 666 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 BNIP3Q12983 259 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 LLGL2Q6P1M3 1020 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 TOP6BLQ8N6T0 577 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 RNF214Q8ND24 703 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 DUSP23Q9BVJ7 150 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 TRAIPQ9BWF2 469 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 C12orf49Q9H741 205 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 PAK6Q9NQU5 681 aaPredicted RBP6.43□□□□□ -1.38
TOP2A-204ENST00000578412 PPM1HQ9ULR3 514 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 PCDHA4Q9UN74 947 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 SLC5A6Q9Y289 635 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 RNF114Q9Y508 228 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 CARMIL1Q5VZK9 1371 aa6.43□□□□□ -1.38
TOP2A-204ENST00000578412 GIPC1O14908 333 aa6.42□□□□□ -1.38
TOP2A-204ENST00000578412 COL19A1Q14993 1142 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms