RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 NFICP08651 508 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 HCLS1P14317 486 aaPredicted RBP3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 RAB6AP20340 208 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 APOBRQ0VD83 1088 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 PAOXQ6QHF9 649 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 BEND4Q6ZU67 534 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 CDC37L1Q7L3B6 337 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 REC114Q7Z4M0 266 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 FBXO27Q8NI29 283 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 EAF1Q96JC9 268 aaPredicted RBP3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 WNT10AQ9GZT5 417 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 SEMA6CQ9H3T2 930 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 SSU72Q9NP77 194 aaKnown RBP3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 UBP1Q9NZI7 540 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 PCOLCE2Q9UKZ9 415 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 TLR3O15455 904 aaKnown RBP3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 GRK4P32298 578 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 NTF4P34130 210 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 CRKP46108 304 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 GJA8P48165 433 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 ZNF165P49910 485 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 ETF1P62495 437 aaKnown RBP3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 PAK2Q13177 524 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 GNL2Q13823 731 aaKnown RBP3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 COL9A2Q14055 689 aaPredicted RBP3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 NKAPLQ5M9Q1 402 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 SLITRK4Q8IW52 837 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.61□□□□□ -1.834e-6■■■■□ 20.2
PTP4A1-204ENST00000578299 REXO1Q8N1G1 1221 aaKnown RBP3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 NKD1Q969G9 470 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 ISL2Q96A47 359 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 GPRASP2Q96D09 838 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 ACBD3Q9H3P7 528 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 C7orf69Q9H7B7 122 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 ADAM30Q9UKF2 790 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 INPP5FQ9Y2H2 1132 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 POLR3KQ9Y2Y1 108 aaPredicted RBP3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 DAGLAQ9Y4D2 1042 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 PRR36Q9H6K5 1346 aa3.61□□□□□ -1.83
PTP4A1-204ENST00000578299 HMX2A2RU54 273 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 GSC2O15499 205 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 ATE1O95260 518 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 PGRP06401 933 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 MCM4P33991 863 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 ZC3H6P61129 1189 aaKnown RBP3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 MLECQ14165 292 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 NFKBIBQ15653 356 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 RSPO4Q2I0M5 234 aaPredicted RBP3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 SEZ6Q53EL9 994 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 TMEM201Q5SNT2 666 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 RNF43Q68DV7 783 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 SEZ6L2Q6UXD5 910 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 SLC51AQ86UW1 340 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 HID1Q8IV36 788 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 GIMAP7Q8NHV1 300 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 RASGRP4Q8TDF6 673 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 EHMT1Q9H9B1 1298 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 BRMS1Q9HCU9 246 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 PCDHB14Q9Y5E9 798 aa3.6□□□□□ -1.83
PTP4A1-204ENST00000578299 DYRK3O43781 588 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 GRIN3BO60391 1043 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 HTR3BO95264 441 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 IMPDH2P12268 514 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 PLCG1P19174 1290 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 FSTP19883 344 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 CAP2P40123 477 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 TNNI2P48788 182 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 NFIAQ12857 509 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 VPS37DQ86XT2 251 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 MCATQ8IVS2 390 aaKnown RBP3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 MRPL41Q8IXM3 137 aaKnown RBP3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 SLC43A3Q8NBI5 491 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 C8orf37Q96NL8 207 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 FOXQ1Q9C009 403 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 FBRSQ9HAH7 460 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 LGR6Q9HBX8 967 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 CAPN10Q9HC96 672 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 C1GALT1Q9NS00 363 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 PRKAG2Q9UGJ0 569 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 CORINQ9Y5Q5 1042 aa3.59□□□□□ -1.83
PTP4A1-204ENST00000578299 DYNC1LI2O43237 492 aaPredicted RBP3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 LRIG2O94898 1065 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 CST3P01034 146 aaPredicted RBP3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 IGLV1-40P01703 118 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 FURINP09958 794 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 SOX9P48436 509 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 YARSP54577 528 aaKnown RBP3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 CYP27A1Q02318 531 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 CLCQ05315 142 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 CDK5R2Q13319 367 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 SLBPQ14493 270 aaKnown RBP eCLIP3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 LRRFIP1Q32MZ4 808 aaKnown RBP3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 SLC6A19Q695T7 634 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 GK5Q6ZS86 529 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 ARMCX6Q7L4S7 300 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 UBE3DQ7Z6J8 389 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 ZAR1Q86SH2 424 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 MFSD2AQ8NA29 543 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 SEC16BQ96JE7 1060 aa3.58□□□□□ -1.84
PTP4A1-204ENST00000578299 TMEM87BQ96K49 555 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms