RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 MYPNQ86TC9 1320 aa17.53■□□□□ 0.4
TVP23A-208ENST00000573857 FCGRTP55899 365 aa17.53■□□□□ 0.4
TVP23A-208ENST00000573857 RAET1EQ8TD07 263 aa17.53■□□□□ 0.4
TVP23A-208ENST00000573857 AATFQ9NY61 560 aaKnown RBP eCLIP17.53■□□□□ 0.4
TVP23A-208ENST00000573857 TLR7Q9NYK1 1049 aaKnown RBP17.53■□□□□ 0.4
TVP23A-208ENST00000573857 DBNLQ9UJU6 430 aaKnown RBP17.53■□□□□ 0.4
TVP23A-208ENST00000573857 AGTPBP1Q9UPW5 1226 aa17.53■□□□□ 0.4
TVP23A-208ENST00000573857 PHIPQ8WWQ0 1821 aa17.52■□□□□ 0.4
TVP23A-208ENST00000573857 BAG3O95817 575 aa17.52■□□□□ 0.4
TVP23A-208ENST00000573857 PLCG2P16885 1265 aa17.52■□□□□ 0.4
TVP23A-208ENST00000573857 ZAP70P43403 619 aa17.52■□□□□ 0.4
TVP23A-208ENST00000573857 ADGRA1Q86SQ6 560 aa17.52■□□□□ 0.4
TVP23A-208ENST00000573857 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
TVP23A-208ENST00000573857 HERC5Q9UII4 1024 aaKnown RBP17.52■□□□□ 0.4
TVP23A-208ENST00000573857 MAST2Q6P0Q8 1798 aa17.52■□□□□ 0.4
TVP23A-208ENST00000573857 PTPRFP10586 1907 aa17.51■□□□□ 0.39
TVP23A-208ENST00000573857 IGSF3O75054 1194 aa17.51■□□□□ 0.39
TVP23A-208ENST00000573857 GRK4P32298 578 aa17.51■□□□□ 0.39
TVP23A-208ENST00000573857 CAP2P40123 477 aa17.51■□□□□ 0.39
TVP23A-208ENST00000573857 PPP4CP60510 307 aa17.51■□□□□ 0.39
TVP23A-208ENST00000573857 PRKCZQ05513 592 aa17.51■□□□□ 0.39
TVP23A-208ENST00000573857 RRP1BQ14684 758 aaKnown RBP17.51■□□□□ 0.39
TVP23A-208ENST00000573857 CEP85Q6P2H3 762 aa17.51■□□□□ 0.39
TVP23A-208ENST00000573857 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
TVP23A-208ENST00000573857 DHX36Q9H2U1 1008 aaKnown RBP17.51■□□□□ 0.39
TVP23A-208ENST00000573857 PI4KBQ9UBF8 816 aa17.51■□□□□ 0.39
TVP23A-208ENST00000573857 SPP2Q13103 211 aa17.5■□□□□ 0.39
TVP23A-208ENST00000573857 MTFR1Q15390 333 aa17.5■□□□□ 0.39
TVP23A-208ENST00000573857 TREML2Q5T2D2 321 aa17.5■□□□□ 0.39
TVP23A-208ENST00000573857 PROCA1Q8NCQ7 364 aaPredicted RBP17.5■□□□□ 0.39
TVP23A-208ENST00000573857 ZNF280CQ8ND82 737 aa17.5■□□□□ 0.39
TVP23A-208ENST00000573857 EAF2Q96CJ1 260 aaPredicted RBP17.5■□□□□ 0.39
TVP23A-208ENST00000573857 TBC1D2Q9BYX2 928 aa17.5■□□□□ 0.39
TVP23A-208ENST00000573857 CCDC8Q9H0W5 538 aaPredicted RBP17.5■□□□□ 0.39
TVP23A-208ENST00000573857 FLT1P17948 1338 aa17.49■□□□□ 0.39
TVP23A-208ENST00000573857 MAPKAPK5Q8IW41 473 aa17.49■□□□□ 0.39
TVP23A-208ENST00000573857 PANK1Q8TE04 598 aa17.49■□□□□ 0.39
TVP23A-208ENST00000573857 TGFBRAP1Q8WUH2 860 aa17.49■□□□□ 0.39
TVP23A-208ENST00000573857 GCC1Q96CN9 775 aa17.49■□□□□ 0.39
TVP23A-208ENST00000573857 PNMA3Q9UL41 463 aa17.49■□□□□ 0.39
TVP23A-208ENST00000573857 USP17L5A8MUK1 530 aa17.48■□□□□ 0.39
TVP23A-208ENST00000573857 HMGCS2P54868 508 aa17.48■□□□□ 0.39
TVP23A-208ENST00000573857 SLAIN1Q8ND83 568 aa17.48■□□□□ 0.39
TVP23A-208ENST00000573857 SHISA4Q96DD7 197 aa17.48■□□□□ 0.39
TVP23A-208ENST00000573857 GABRQQ9UN88 632 aa17.48■□□□□ 0.39
TVP23A-208ENST00000573857 METTL16Q86W50 562 aaKnown RBP17.47■□□□□ 0.39
TVP23A-208ENST00000573857 ERC1Q8IUD2 1116 aa17.47■□□□□ 0.39
TVP23A-208ENST00000573857 DNAJC18Q9H819 358 aa17.47■□□□□ 0.39
TVP23A-208ENST00000573857 BIN2Q9UBW5 565 aaPredicted RBP17.47■□□□□ 0.39
TVP23A-208ENST00000573857 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
TVP23A-208ENST00000573857 EXOC6BQ9Y2D4 811 aa17.47■□□□□ 0.39
TVP23A-208ENST00000573857 LOC285556D6RIA3 1793 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 IDH1O75874 414 aaKnown RBP17.46■□□□□ 0.39
TVP23A-208ENST00000573857 CCL5P13501 91 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 CYP7A1P22680 504 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 FLT3LGP49771 235 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 UBXN2AP68543 259 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 FAM110CQ1W6H9 321 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 SH3D19Q5HYK7 790 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 ANKRD13CQ8N6S4 541 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 AS3MTQ9HBK9 375 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 SIPA1L1O43166 1804 aa17.46■□□□□ 0.39
TVP23A-208ENST00000573857 TNPO2O14787 897 aaKnown RBP17.45■□□□□ 0.38
TVP23A-208ENST00000573857 GJB1P08034 283 aa17.45■□□□□ 0.38
TVP23A-208ENST00000573857 ASNSP08243 561 aa17.45■□□□□ 0.38
TVP23A-208ENST00000573857 DYNLL1P63167 89 aaKnown RBP17.45■□□□□ 0.38
TVP23A-208ENST00000573857 JAG1P78504 1218 aa17.45■□□□□ 0.38
TVP23A-208ENST00000573857 PABPC4Q13310 644 aaKnown RBP eCLIP17.45■□□□□ 0.38
TVP23A-208ENST00000573857 AACSQ86V21 672 aa17.45■□□□□ 0.38
TVP23A-208ENST00000573857 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
TVP23A-208ENST00000573857 CRACR2BQ8N4Y2 399 aaPredicted RBP17.45■□□□□ 0.38
TVP23A-208ENST00000573857 NKX2-3Q8TAU0 364 aa17.45■□□□□ 0.38
TVP23A-208ENST00000573857 WDR18Q9BV38 432 aa17.45■□□□□ 0.38
TVP23A-208ENST00000573857 TRIM34Q9BYJ4 488 aa17.45■□□□□ 0.38
TVP23A-208ENST00000573857 RNF208Q9H0X6 261 aa17.45■□□□□ 0.38
TVP23A-208ENST00000573857 SAP30BPQ9UHR5 308 aaKnown RBP17.45■□□□□ 0.38
TVP23A-208ENST00000573857 NDUFB9Q9Y6M9 179 aa17.45■□□□□ 0.38
TVP23A-208ENST00000573857 ATAD5Q96QE3 1844 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 MGAMO43451 1857 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 ADCY3O60266 1144 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 GJA8P48165 433 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 GCLCP48506 637 aaPredicted RBP17.44■□□□□ 0.38
TVP23A-208ENST00000573857 IRF5Q13568 498 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 MTMR2Q13614 643 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 CERS3Q8IU89 383 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 MAGEB6Q8N7X4 407 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 MIGA1Q8NAN2 632 aa17.44■□□□□ 0.38
TVP23A-208ENST00000573857 ASCC2Q9H1I8 757 aaPredicted RBP17.44■□□□□ 0.38
TVP23A-208ENST00000573857 MYO5AQ9Y4I1 1855 aaKnown RBP17.44■□□□□ 0.38
TVP23A-208ENST00000573857 RANBP2P49792 3224 aaKnown RBP17.43■□□□□ 0.38
TVP23A-208ENST00000573857 FOCADQ5VW36 1801 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 MS4A1P11836 297 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 ELNP15502 786 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 BACE1P56817 501 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 SHROOM1Q2M3G4 852 aaPredicted RBP17.43■□□□□ 0.38
TVP23A-208ENST00000573857 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 PXYLP1Q8TE99 480 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 COA7Q96BR5 231 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 ANTXR1Q9H6X2 564 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms