RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 PARD6BQ9BYG5 372 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 IL1RAPL2Q9NP60 686 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 DNAAF2Q9NVR5 837 aaKnown RBP11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 LIN7AO14910 233 aaPredicted RBP11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 DHX8Q14562 1220 aaKnown RBP11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 MIS18BP1Q6P0N0 1132 aa11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 AFAP1L1Q8TED9 768 aa11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 RBM33Q96EV2 1170 aaKnown RBP11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 IL25Q9H293 177 aa11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 RTEL1Q9NZ71 1219 aa11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 CORO1CQ9ULV4 474 aaPredicted RBP11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
CHRNB1-205ENST00000573209 RNF8O76064 485 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 KCNJ6P48051 423 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 CCT5P48643 541 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 SLMAPQ14BN4 828 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 RUFY2Q8WXA3 655 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 SCLT1Q96NL6 688 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 GORASP1Q9BQQ3 440 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 NACA2Q9H009 215 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 TRMT1Q9NXH9 659 aaKnown RBP11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 CAMTA1Q9Y6Y1 1673 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 SHOX2O60902 331 aaPredicted RBP11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 GLRX3O76003 335 aaKnown RBP11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 CAVIN2O95810 425 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 FLT3P36888 993 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 CCZ1BP86790 482 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 CCZ1P86791 482 aaPredicted RBP11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 MTX1Q13505 466 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 CEP57Q86XR8 500 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 MYOCDQ8IZQ8 938 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 TRIM58Q8NG06 486 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 DHRS1Q96LJ7 313 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 SLC39A2Q9NP94 309 aa11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 ZNF335Q9H4Z2 1342 aaPredicted RBP11.87□□□□□ -0.51
CHRNB1-205ENST00000573209 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 STX6O43752 255 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 AK2P54819 239 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC144BQ3MJ40 725 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 KBTBD12Q3ZCT8 623 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 GIMAP6Q6P9H5 292 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 PARP9Q8IXQ6 854 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 FAM204AQ9H8W3 233 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 PAPOLBQ9NRJ5 636 aaKnown RBP11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 WDR37Q9Y2I8 494 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 ATP8A1Q9Y2Q0 1164 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 GOLGA6L9A6NEM1 432 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 ZNF189O75820 626 aaPredicted RBP11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC175P0C221 793 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 SLC7A5Q01650 507 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 CUL3Q13618 768 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 BEND3Q5T5X7 828 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 SYNE3Q6ZMZ3 975 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 B4GALNT4Q76KP1 1039 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 CUL5Q93034 780 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 CLIC6Q96NY7 704 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 TM6SF1Q9BZW5 370 aa11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 PHAXQ9H814 394 aaKnown RBP11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 SH2B1Q9NRF2 756 aaPredicted RBP11.86□□□□□ -0.51
CHRNB1-205ENST00000573209 ADAMTS7Q9UKP4 1686 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 RASSF9O75901 435 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 SMNDC1O75940 238 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 F13A1P00488 732 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 SYT1P21579 422 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 RPL13P26373 211 aaKnown RBP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC57Q2TAC2 916 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 GORABQ5T7V8 394 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 STAG2Q8N3U4 1231 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 GPATCH3Q96I76 525 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 ZSCAN31Q96LW9 406 aaPredicted RBP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 KRT38O76015 456 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 VDRP11473 427 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 HARSP12081 509 aaKnown RBP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 XBP1P17861 261 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 EIF4A1P60842 406 aaKnown RBP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 ACTN3Q08043 901 aaPredicted RBP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 PKN1Q16512 942 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 VPS53Q5VIR6 699 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 RUFY3Q7L099 469 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 RNF168Q8IYW5 571 aaPredicted RBP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 PPP1R13BQ96KQ4 1090 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 CARD6Q9BX69 1037 aa11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 BARX2Q9UMQ3 279 aaPredicted RBP11.85□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC69A6NI79 296 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 YY1P25490 414 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 GSDMDP57764 484 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 ETF1P62495 437 aaKnown RBP11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 Q4G0T1 1027 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC38Q502W7 563 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 CDC37L1Q7L3B6 337 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 RSRC2Q7L4I2 434 aaKnown RBP11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 CACTIN-AS1Q8N1I8 211 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC150Q8NCX0 1101 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 JAKMIP2Q96AA8 810 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 MTRQ99707 1265 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms