RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 TCHHQ07283 1943 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 TRIM75PA6NK02 468 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 PLEKHA8P1O95397 391 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 SCNN1DP51172 638 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 KARSQ15046 597 aaKnown RBP18.56■□□□□ 0.56
RAB40B-206ENST00000571995 KRI1Q8N9T8 703 aaKnown RBP18.56■□□□□ 0.56
RAB40B-206ENST00000571995 FANCBQ8NB91 859 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 SMARCC2Q8TAQ2 1214 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 RGPD2P0DJD1 1756 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 IDEP14735 1019 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 TMEM87BQ96K49 555 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
RAB40B-206ENST00000571995 PCDHA5Q9Y5H7 936 aa18.56■□□□□ 0.56
RAB40B-206ENST00000571995 USP27XA6NNY8 438 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 CCT6AP40227 531 aaKnown RBP18.55■□□□□ 0.56
RAB40B-206ENST00000571995 DNA2P51530 1060 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 SKIDA1Q1XH10 827 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 LONRF3Q496Y0 759 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 FANCLQ9NW38 375 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 ELP1O95163 1332 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
RAB40B-206ENST00000571995 GSG1L2A8MUP6 293 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 TRIM37O94972 964 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 GRIN1Q05586 938 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 DOK7Q18PE1 504 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 HPS5Q9UPZ3 1129 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 ZMYM6O95789 1325 aa18.55■□□□□ 0.56
RAB40B-206ENST00000571995 CSF1RP07333 972 aa18.54■□□□□ 0.56
RAB40B-206ENST00000571995 FANCCQ00597 558 aa18.54■□□□□ 0.56
RAB40B-206ENST00000571995 TSGA10IPQ3SY00 556 aa18.54■□□□□ 0.56
RAB40B-206ENST00000571995 USP49Q70CQ1 688 aa18.54■□□□□ 0.56
RAB40B-206ENST00000571995 CRACR2BQ8N4Y2 399 aaPredicted RBP18.54■□□□□ 0.56
RAB40B-206ENST00000571995 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
RAB40B-206ENST00000571995 TXLNAP40222 546 aa18.54■□□□□ 0.56
RAB40B-206ENST00000571995 SNW1Q13573 536 aaKnown RBP18.54■□□□□ 0.56
RAB40B-206ENST00000571995 KCNB2Q92953 911 aa18.54■□□□□ 0.56
RAB40B-206ENST00000571995 CDK5RAP3Q96JB5 506 aa18.54■□□□□ 0.56
RAB40B-206ENST00000571995 TPM1P09493 284 aa18.53■□□□□ 0.56
RAB40B-206ENST00000571995 PRKCSHP14314 528 aaPredicted RBP18.53■□□□□ 0.56
RAB40B-206ENST00000571995 ADKP55263 362 aaKnown RBP18.53■□□□□ 0.56
RAB40B-206ENST00000571995 TSR1Q2NL82 804 aaKnown RBP18.53■□□□□ 0.56
RAB40B-206ENST00000571995 PPFIBP1Q86W92 1011 aa18.53■□□□□ 0.56
RAB40B-206ENST00000571995 NOSTRINQ8IVI9 506 aa18.53■□□□□ 0.56
RAB40B-206ENST00000571995 RTEL1Q9NZ71 1219 aa18.53■□□□□ 0.56
RAB40B-206ENST00000571995 LTN1O94822 1766 aa18.53■□□□□ 0.56
RAB40B-206ENST00000571995 U2AF2P26368 475 aaKnown RBP eCLIP18.53■□□□□ 0.56
RAB40B-206ENST00000571995 KIAA1524Q8TCG1 905 aa18.53■□□□□ 0.56
RAB40B-206ENST00000571995 GPCPD1Q9NPB8 672 aa18.53■□□□□ 0.56
RAB40B-206ENST00000571995 NAP1L1P55209 391 aaKnown RBP18.52■□□□□ 0.56
RAB40B-206ENST00000571995 GTF2IP78347 998 aa18.52■□□□□ 0.56
RAB40B-206ENST00000571995 EPSTI1Q96J88 318 aa18.52■□□□□ 0.56
RAB40B-206ENST00000571995 UBA5Q9GZZ9 404 aa18.52■□□□□ 0.56
RAB40B-206ENST00000571995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.52■□□□□ 0.56
RAB40B-206ENST00000571995 USP17L3A6NCW0 530 aa18.52■□□□□ 0.56
RAB40B-206ENST00000571995 USP17L4A6NCW7 530 aa18.52■□□□□ 0.56
RAB40B-206ENST00000571995 USP17L1Q7RTZ2 530 aa18.52■□□□□ 0.56
RAB40B-206ENST00000571995 MINPP1Q9UNW1 487 aa18.52■□□□□ 0.56
RAB40B-206ENST00000571995 NFE2L3Q9Y4A8 694 aa18.52■□□□□ 0.56
RAB40B-206ENST00000571995 ADGRA1Q86SQ6 560 aa18.52■□□□□ 0.55
RAB40B-206ENST00000571995 BCL2L12Q9HB09 334 aa18.52■□□□□ 0.55
RAB40B-206ENST00000571995 LY9Q9HBG7 655 aa18.52■□□□□ 0.55
RAB40B-206ENST00000571995 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.55
RAB40B-206ENST00000571995 DYNC1I1O14576 645 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 UBA7P41226 1012 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 EIF5P55010 431 aaKnown RBP18.51■□□□□ 0.55
RAB40B-206ENST00000571995 LETM2Q2VYF4 491 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 RRAGBQ5VZM2 374 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 TEX11Q8IYF3 940 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 ANKRD20A12PQ8NF67 263 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 DESI2Q9BSY9 194 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 ZHX1Q9UKY1 873 aaPredicted RBP18.51■□□□□ 0.55
RAB40B-206ENST00000571995 BAG3O95817 575 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 KIF18AQ8NI77 898 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
RAB40B-206ENST00000571995 TANGO6Q9C0B7 1094 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 PDCL3Q9H2J4 239 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 LZTFL1Q9NQ48 299 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 NALCNQ8IZF0 1738 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 JAKMIP3Q5VZ66 844 aa18.51■□□□□ 0.55
RAB40B-206ENST00000571995 ILDR1Q86SU0 546 aaPredicted RBP18.51■□□□□ 0.55
RAB40B-206ENST00000571995 MECOMQ03112 1051 aa18.5■□□□□ 0.55
RAB40B-206ENST00000571995 RAD51AP2Q09MP3 1159 aa18.5■□□□□ 0.55
RAB40B-206ENST00000571995 TRIM28Q13263 835 aaKnown RBP18.5■□□□□ 0.55
RAB40B-206ENST00000571995 ZNF771Q7L3S4 317 aaPredicted RBP18.5■□□□□ 0.55
RAB40B-206ENST00000571995 TXNRD3Q86VQ6 643 aa18.5■□□□□ 0.55
RAB40B-206ENST00000571995 CPDO75976 1380 aa18.5■□□□□ 0.55
RAB40B-206ENST00000571995 YEATS4O95619 227 aa18.5■□□□□ 0.55
RAB40B-206ENST00000571995 NAPAP54920 295 aa18.5■□□□□ 0.55
RAB40B-206ENST00000571995 SLC39A14Q15043 492 aa18.5■□□□□ 0.55
RAB40B-206ENST00000571995 LINC00116Q8NCU8 138 aa18.5■□□□□ 0.55
RAB40B-206ENST00000571995 SEC63Q9UGP8 760 aaKnown RBP18.5■□□□□ 0.55
RAB40B-206ENST00000571995 DEXIO95424 95 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 GNAT2P19087 354 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 GNG11P61952 73 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 NKX1-1Q15270 411 aaPredicted RBP18.49■□□□□ 0.55
RAB40B-206ENST00000571995 CSRNP2Q9H175 543 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 KRT2P35908 639 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 MYL5Q02045 173 aa18.49■□□□□ 0.55
RAB40B-206ENST00000571995 NOM1Q5C9Z4 860 aaKnown RBP18.49■□□□□ 0.55
RAB40B-206ENST00000571995 MFSD14BQ5SR56 506 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms