RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
UBR1-209ENST00000569243 SSU72Q9NP77 194 aaKnown RBP6.92□□□□□ -1.3
UBR1-209ENST00000569243 GTF2IRD1Q9UHL9 959 aa6.92□□□□□ -1.3
UBR1-209ENST00000569243 KRTAP1-1Q07627 177 aa6.91□□□□□ -1.3
UBR1-209ENST00000569243 BRPF3Q9ULD4 1205 aa6.91□□□□□ -1.3
UBR1-209ENST00000569243 A0A1W2PP55 124 aa6.9□□□□□ -1.3
UBR1-209ENST00000569243 IGF2BP3O00425 579 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBR1-209ENST00000569243 AP3B2Q13367 1082 aa6.9□□□□□ -1.3
UBR1-209ENST00000569243 ZNF211Q13398 564 aaPredicted RBP6.9□□□□□ -1.3
UBR1-209ENST00000569243 KIAA0319Q5VV43 1072 aa6.9□□□□□ -1.3
UBR1-209ENST00000569243 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBR1-209ENST00000569243 NDUFB5O43674 189 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 ZNF862O60290 1169 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 NEFMP07197 916 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 CLCN7P51798 805 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 ARHGAP4P98171 946 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 PTPN12Q05209 780 aaKnown RBP6.89□□□□□ -1.31
UBR1-209ENST00000569243 GLYCTKQ8IVS8 523 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 CXorf38Q8TB03 319 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 ABHD4Q8TB40 342 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 ISL2Q96A47 359 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 ATP13A1Q9HD20 1204 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 ANO2Q9NQ90 1003 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 RTEL1Q9NZ71 1219 aa6.89□□□□□ -1.31
UBR1-209ENST00000569243 GNAT3A8MTJ3 354 aa6.88□□□□□ -1.31
UBR1-209ENST00000569243 MARCH10Q8NA82 808 aaPredicted RBP6.88□□□□□ -1.31
UBR1-209ENST00000569243 BORCS6Q96GS4 357 aa6.88□□□□□ -1.31
UBR1-209ENST00000569243 FAM129BQ96TA1 746 aa6.88□□□□□ -1.31
UBR1-209ENST00000569243 DNAJC25Q9H1X3 360 aa6.88□□□□□ -1.31
UBR1-209ENST00000569243 ZNF576Q9H609 170 aa6.88□□□□□ -1.31
UBR1-209ENST00000569243 PCDHGC5Q9Y5F6 944 aa6.88□□□□□ -1.31
UBR1-209ENST00000569243 CARNS1A5YM72 827 aa6.87□□□□□ -1.31
UBR1-209ENST00000569243 ADRB1P08588 477 aa6.87□□□□□ -1.31
UBR1-209ENST00000569243 KIF4BQ2VIQ3 1234 aa6.87□□□□□ -1.31
UBR1-209ENST00000569243 TXNDC2Q86VQ3 553 aa6.87□□□□□ -1.31
UBR1-209ENST00000569243 H3BRB1 525 aa6.86□□□□□ -1.31
UBR1-209ENST00000569243 TRIM13O60858 407 aa6.86□□□□□ -1.31
UBR1-209ENST00000569243 CPNE3O75131 537 aaKnown RBP6.86□□□□□ -1.31
UBR1-209ENST00000569243 ITPKAP23677 461 aa6.86□□□□□ -1.31
UBR1-209ENST00000569243 NPAS4Q8IUM7 802 aa6.86□□□□□ -1.31
UBR1-209ENST00000569243 TUT1Q9H6E5 874 aaKnown RBP6.86□□□□□ -1.31
UBR1-209ENST00000569243 CELA3BP08861 270 aa6.85□□□□□ -1.31
UBR1-209ENST00000569243 SRFP11831 508 aa6.85□□□□□ -1.31
UBR1-209ENST00000569243 RAC2P15153 192 aa6.85□□□□□ -1.31
UBR1-209ENST00000569243 SERPINB4P48594 390 aa6.85□□□□□ -1.31
UBR1-209ENST00000569243 RPS26P11Q5JNZ5 115 aaPredicted RBP6.85□□□□□ -1.31
UBR1-209ENST00000569243 BAHD1Q8TBE0 780 aaPredicted RBP6.85□□□□□ -1.31
UBR1-209ENST00000569243 HSPA12BQ96MM6 686 aa6.85□□□□□ -1.31
UBR1-209ENST00000569243 PRDM10Q9NQV6 1147 aa6.85□□□□□ -1.31
UBR1-209ENST00000569243 ZNF157P51786 506 aaPredicted RBP6.84□□□□□ -1.31
UBR1-209ENST00000569243 TCERG1LQ5VWI1 586 aa6.84□□□□□ -1.31
UBR1-209ENST00000569243 PRPF40BQ6NWY9 871 aaKnown RBP6.84□□□□□ -1.31
UBR1-209ENST00000569243 ALKBH8Q96BT7 664 aaKnown RBP6.84□□□□□ -1.31
UBR1-209ENST00000569243 DMRTB1Q96MA1 342 aa6.84□□□□□ -1.31
UBR1-209ENST00000569243 SEMA3GQ9NS98 782 aa6.84□□□□□ -1.31
UBR1-209ENST00000569243 IGHA2P01877 340 aa6.83□□□□□ -1.32
UBR1-209ENST00000569243 TTC6Q86TZ1 520 aa6.83□□□□□ -1.32
UBR1-209ENST00000569243 CCDC120Q96HB5 630 aa6.83□□□□□ -1.32
UBR1-209ENST00000569243 ALPK1Q96QP1 1244 aa6.83□□□□□ -1.32
UBR1-209ENST00000569243 DLG4P78352 724 aa6.82□□□□□ -1.32
UBR1-209ENST00000569243 ZXDCQ2QGD7 858 aaPredicted RBP6.82□□□□□ -1.32
UBR1-209ENST00000569243 RBCK1Q9BYM8 510 aa6.82□□□□□ -1.32
UBR1-209ENST00000569243 XYLT2Q9H1B5 865 aa6.82□□□□□ -1.32
UBR1-209ENST00000569243 EHD4Q9H223 541 aa6.82□□□□□ -1.32
UBR1-209ENST00000569243 SLAMF8Q9P0V8 285 aa6.82□□□□□ -1.32
UBR1-209ENST00000569243 CNOT6Q9ULM6 557 aaKnown RBP6.82□□□□□ -1.32
UBR1-209ENST00000569243 TRAK1Q9UPV9 953 aa6.82□□□□□ -1.32
UBR1-209ENST00000569243 ERVFC1P60507 584 aa6.81□□□□□ -1.32
UBR1-209ENST00000569243 CDKAL1Q5VV42 579 aa6.81□□□□□ -1.32
UBR1-209ENST00000569243 USPL1Q5W0Q7 1092 aa6.81□□□□□ -1.32
UBR1-209ENST00000569243 MYLIPQ8WY64 445 aa6.81□□□□□ -1.32
UBR1-209ENST00000569243 CCDC74AQ96AQ1 378 aa6.81□□□□□ -1.32
UBR1-209ENST00000569243 FOXQ1Q9C009 403 aa6.81□□□□□ -1.32
UBR1-209ENST00000569243 ADAMTS20P59510 1910 aa6.81□□□□□ -1.32
UBR1-209ENST00000569243 OTOL1A6NHN0 477 aaPredicted RBP6.8□□□□□ -1.32
UBR1-209ENST00000569243 FAM155AB1AL88 458 aaPredicted RBP6.8□□□□□ -1.32
UBR1-209ENST00000569243 EIF1AYO14602 144 aaKnown RBP6.8□□□□□ -1.32
UBR1-209ENST00000569243 GSTP1P09211 210 aaKnown RBP6.8□□□□□ -1.32
UBR1-209ENST00000569243 HNRNPUQ00839 825 aaKnown RBP eCLIP6.8□□□□□ -1.32
UBR1-209ENST00000569243 ORC1Q13415 861 aa6.8□□□□□ -1.32
UBR1-209ENST00000569243 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
UBR1-209ENST00000569243 MCOLN1Q9GZU1 580 aa6.8□□□□□ -1.32
UBR1-209ENST00000569243 PRDM5Q9NQX1 630 aaPredicted RBP6.8□□□□□ -1.32
UBR1-209ENST00000569243 KRT82Q9NSB4 513 aa6.8□□□□□ -1.32
UBR1-209ENST00000569243 TMEM238LA0A1B0GVL6 79 aa6.79□□□□□ -1.32
UBR1-209ENST00000569243 H3BS24 57 aa6.79□□□□□ -1.32
UBR1-209ENST00000569243 SUV39H1O43463 412 aa6.79□□□□□ -1.32
UBR1-209ENST00000569243 EOMESO95936 686 aa6.79□□□□□ -1.32
UBR1-209ENST00000569243 ABCB6Q9NP58 842 aa6.79□□□□□ -1.32
UBR1-209ENST00000569243 NPHS2Q9NP85 383 aa6.79□□□□□ -1.32
UBR1-209ENST00000569243 GNEQ9Y223 722 aaKnown RBP6.79□□□□□ -1.32
UBR1-209ENST00000569243 PRR33A8MZF0 331 aa6.78□□□□□ -1.32
UBR1-209ENST00000569243 GPR182O15218 404 aa6.78□□□□□ -1.32
UBR1-209ENST00000569243 SASH1O94885 1247 aa6.78□□□□□ -1.32
UBR1-209ENST00000569243 XRCC5P13010 732 aaKnown RBP6.78□□□□□ -1.32
UBR1-209ENST00000569243 ZNF385BQ569K4 471 aa6.78□□□□□ -1.32
UBR1-209ENST00000569243 ERICH6BQ5W0A0 696 aa6.78□□□□□ -1.32
UBR1-209ENST00000569243 RETREG2Q8NC44 543 aa6.78□□□□□ -1.32
UBR1-209ENST00000569243 KCNB2Q92953 911 aa6.78□□□□□ -1.32
UBR1-209ENST00000569243 PPP4R2Q9NY27 417 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms