RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 B4E1Z4 1266 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 SH2B2O14492 632 aaPredicted RBP12.26□□□□□ -0.45
CDH11-214ENST00000568340 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
CDH11-214ENST00000568340 SLURP2P0DP57 97 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 NOVP48745 357 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 CUL4AQ13619 759 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 DLGAP5Q15398 846 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 OGFOD1Q8N543 542 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 NCOA7Q8NI08 942 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 DYNLL2Q96FJ2 89 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDH11-214ENST00000568340 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
CDH11-214ENST00000568340 SAP30BPQ9UHR5 308 aaKnown RBP12.26□□□□□ -0.45
CDH11-214ENST00000568340 CNOT7Q9UIV1 285 aaKnown RBP12.26□□□□□ -0.45
CDH11-214ENST00000568340 CYP46A1Q9Y6A2 500 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 NID2Q14112 1375 aa12.26□□□□□ -0.45
CDH11-214ENST00000568340 CLRN2A0PK11 232 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 MINDY4BA8MYZ0 360 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 POTECB2RU33 542 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 K7ELQ4 463 aaPredicted RBP12.25□□□□□ -0.45
CDH11-214ENST00000568340 HMGB1P09429 215 aaKnown RBP12.25□□□□□ -0.45
CDH11-214ENST00000568340 RASA1P20936 1047 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 SHMT1P34896 483 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 DDIT3P35638 169 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 EPS15P42566 896 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 NT5C2P49902 561 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 PICALMQ13492 652 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 SEC23AQ15436 765 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 KIF4BQ2VIQ3 1234 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 FAM83AQ86UY5 434 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 IGDCC4Q8TDY8 1250 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 DDRGK1Q96HY6 314 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 TEPSINQ96N21 525 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 MTA3Q9BTC8 594 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 SENP2Q9HC62 589 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 PDRG1Q9NUG6 133 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 TPCN1Q9ULQ1 816 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 GJA3Q9Y6H8 435 aa12.25□□□□□ -0.45
CDH11-214ENST00000568340 IGKV6D-41A0A0C4DH26 115 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 PRC1O43663 620 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 ST18O60284 1047 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 KDM4AO75164 1064 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 MAP3K10Q02779 954 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 SLC4A8Q2Y0W8 1093 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 SGMS1Q86VZ5 419 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 TMX3Q96JJ7 454 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 LRRC2Q9BYS8 371 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 RNF41Q9H4P4 317 aaPredicted RBP12.24□□□□□ -0.45
CDH11-214ENST00000568340 CNNM2Q9H8M5 875 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 LY9Q9HBG7 655 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 ZSWIM5Q9P217 1185 aa12.24□□□□□ -0.45
CDH11-214ENST00000568340 PRDM1O75626 825 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 MCM5P33992 734 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 CDK8P49336 464 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 MCM2P49736 904 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 RBM5P52756 815 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDH11-214ENST00000568340 RRP1BQ14684 758 aaKnown RBP12.23□□□□□ -0.45
CDH11-214ENST00000568340 ME3Q16798 604 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 TBC1D10BQ4KMP7 808 aaPredicted RBP12.23□□□□□ -0.45
CDH11-214ENST00000568340 RCSD1Q6JBY9 416 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 MFSD6Q6ZSS7 791 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 Q6ZUG5 572 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 CHST3Q7LGC8 479 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 FAM151AQ8WW52 585 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 KRT23Q9C075 422 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 HPS5Q9UPZ3 1129 aa12.23□□□□□ -0.45
CDH11-214ENST00000568340 GLTPD2A6NH11 291 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 TCP10Q12799 353 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 TATDN1Q6P1N9 297 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
CDH11-214ENST00000568340 HSCBQ8IWL3 235 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 ANKS1AQ92625 1134 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 TMEM87BQ96K49 555 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 DHX36Q9H2U1 1008 aaKnown RBP12.22□□□□□ -0.45
CDH11-214ENST00000568340 IL17RBQ9NRM6 502 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 SCN4AP35499 1836 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 CEP350Q5VT06 3117 aa12.22□□□□□ -0.45
CDH11-214ENST00000568340 PITPNM2Q9BZ72 1349 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 TCP10L2B9ZVM9 353 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 POLR3DP05423 398 aaPredicted RBP12.21□□□□□ -0.45
CDH11-214ENST00000568340 LIFRP42702 1097 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 JAG1P78504 1218 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 SHROOM1Q2M3G4 852 aaPredicted RBP12.21□□□□□ -0.45
CDH11-214ENST00000568340 TTC6Q86TZ1 520 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 ENAHQ8N8S7 591 aaPredicted RBP12.21□□□□□ -0.45
CDH11-214ENST00000568340 ESR2Q92731 530 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 BRF1Q92994 677 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.45
CDH11-214ENST00000568340 TMEM39BQ9GZU3 492 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
CDH11-214ENST00000568340 TCP11L1Q9NUJ3 509 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 SWAP70Q9UH65 585 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 SERPINB13Q9UIV8 391 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 ANGEL1Q9UNK9 670 aaKnown RBP12.21□□□□□ -0.45
CDH11-214ENST00000568340 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
CDH11-214ENST00000568340 FAM196BA6NMK8 535 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms