RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 FEZ1Q99689 392 aa19.35■□□□□ 0.69
CMTM3-213ENST00000566756 MTA3Q9BTC8 594 aa19.35■□□□□ 0.69
CMTM3-213ENST00000566756 FILIP1Q7Z7B0 1213 aa19.34■□□□□ 0.69
CMTM3-213ENST00000566756 VPS37DQ86XT2 251 aa19.34■□□□□ 0.69
CMTM3-213ENST00000566756 IGDCC4Q8TDY8 1250 aa19.34■□□□□ 0.69
CMTM3-213ENST00000566756 AKT1S1Q96B36 256 aa19.34■□□□□ 0.69
CMTM3-213ENST00000566756 STRBPQ96SI9 672 aaKnown RBP19.34■□□□□ 0.69
CMTM3-213ENST00000566756 ZNF532Q9HCE3 1301 aa19.34■□□□□ 0.69
CMTM3-213ENST00000566756 NPHP1O15259 732 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 NCAPHQ15003 741 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 PTPAQ15257 358 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 NTRK3Q16288 839 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 KRT40Q6A162 431 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 PRR5LQ6MZQ0 368 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 SPATA5Q8NB90 893 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 ANKRD2Q9GZV1 360 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 CNNM2Q9H8M5 875 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 ZNF804BA4D1E1 1349 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 ECM29Q5VYK3 1845 aa19.33■□□□□ 0.69
CMTM3-213ENST00000566756 PSDA5PKW4 1024 aaPredicted RBP19.33■□□□□ 0.68
CMTM3-213ENST00000566756 SNAP23O00161 211 aa19.33■□□□□ 0.68
CMTM3-213ENST00000566756 ZBTB43O43298 467 aa19.33■□□□□ 0.68
CMTM3-213ENST00000566756 NRDCO43847 1150 aa19.33■□□□□ 0.68
CMTM3-213ENST00000566756 SYKP43405 635 aa19.33■□□□□ 0.68
CMTM3-213ENST00000566756 ARID5BQ14865 1188 aa19.33■□□□□ 0.68
CMTM3-213ENST00000566756 FLAD1Q8NFF5 587 aa19.33■□□□□ 0.68
CMTM3-213ENST00000566756 WASF1Q92558 559 aa19.33■□□□□ 0.68
CMTM3-213ENST00000566756 CGNQ9P2M7 1197 aaKnown RBP19.33■□□□□ 0.68
CMTM3-213ENST00000566756 PATL2C9JE40 543 aaKnown RBP19.32■□□□□ 0.68
CMTM3-213ENST00000566756 WDHD1O75717 1129 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-213ENST00000566756 IDH1O75874 414 aaKnown RBP19.32■□□□□ 0.68
CMTM3-213ENST00000566756 SERPINB2P05120 415 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 RASGRF1Q13972 1273 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 FBXO41Q8TF61 875 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 MAP3K14Q99558 947 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 A0A087WWV3 80 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 ZBTB22O15209 634 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 CUTAO60888 179 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 IARSP41252 1262 aaKnown RBP19.32■□□□□ 0.68
CMTM3-213ENST00000566756 RCAN1P53805 252 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 TRIM29Q14134 588 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 RESP18Q5W5W9 173 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 ERCC4Q92889 916 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-213ENST00000566756 AIDAQ96BJ3 306 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 XPO4Q9C0E2 1151 aaKnown RBP19.32■□□□□ 0.68
CMTM3-213ENST00000566756 LY9Q9HBG7 655 aa19.32■□□□□ 0.68
CMTM3-213ENST00000566756 MROH7-TTC4A0A0A0MT08 1334 aa19.31■□□□□ 0.68
CMTM3-213ENST00000566756 BCAMP50895 628 aa19.31■□□□□ 0.68
CMTM3-213ENST00000566756 CCDC24Q8N4L8 307 aa19.31■□□□□ 0.68
CMTM3-213ENST00000566756 GJB4Q9NTQ9 266 aa19.31■□□□□ 0.68
CMTM3-213ENST00000566756 B4E1Z4 1266 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 APPP05067 770 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 CDC27P30260 824 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 ST5P78524 1137 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 CRY2Q49AN0 593 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 POTEAQ6S8J7 498 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 KIF18AQ8NI77 898 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 NOL10Q9BSC4 688 aaKnown RBP19.3■□□□□ 0.68
CMTM3-213ENST00000566756 KRT23Q9C075 422 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 TFCP2L1Q9NZI6 479 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 IFNKQ9P0W0 207 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 NRXN2Q9P2S2 1712 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 CHD4Q14839 1912 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 USP27XA6NNY8 438 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 GOLGA8AA7E2F4 631 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 CBFA2T2O43439 604 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 GNAT2P19087 354 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 MAP3K12Q12852 859 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 GRAPQ13588 217 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 ZNF827Q17R98 1081 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 SHC4Q6S5L8 630 aa19.3■□□□□ 0.68
CMTM3-213ENST00000566756 GRAPLQ8TC17 118 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-213ENST00000566756 FAM217BQ9NTX9 383 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-213ENST00000566756 GNL3LQ9NVN8 582 aaKnown RBP19.3■□□□□ 0.68
CMTM3-213ENST00000566756 POLRMTO00411 1230 aaKnown RBP19.29■□□□□ 0.68
CMTM3-213ENST00000566756 CCP110O43303 1012 aa19.29■□□□□ 0.68
CMTM3-213ENST00000566756 SMC2O95347 1197 aa19.29■□□□□ 0.68
CMTM3-213ENST00000566756 FMNL1O95466 1100 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-213ENST00000566756 IFNAR1P17181 557 aa19.29■□□□□ 0.68
CMTM3-213ENST00000566756 SFPQP23246 707 aaKnown RBP eCLIP19.29■□□□□ 0.68
CMTM3-213ENST00000566756 TMEM67Q5HYA8 995 aa19.29■□□□□ 0.68
CMTM3-213ENST00000566756 UTP14CQ5TAP6 766 aaKnown RBP19.29■□□□□ 0.68
CMTM3-213ENST00000566756 RAB11FIP4Q86YS3 637 aa19.29■□□□□ 0.68
CMTM3-213ENST00000566756 NLGN1Q8N2Q7 840 aa19.29■□□□□ 0.68
CMTM3-213ENST00000566756 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.29■□□□□ 0.68
CMTM3-213ENST00000566756 WWC3Q9ULE0 1092 aa19.29■□□□□ 0.68
CMTM3-213ENST00000566756 MYH13Q9UKX3 1938 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 GNL2Q13823 731 aaKnown RBP19.28■□□□□ 0.68
CMTM3-213ENST00000566756 CAVIN4Q5BKX8 364 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 IFNL3Q8IZI9 196 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 MARCKSP29966 332 aaPredicted RBP19.28■□□□□ 0.68
CMTM3-213ENST00000566756 FANCCQ00597 558 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 MYL5Q02045 173 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 DDR1Q08345 913 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 SSRP1Q08945 709 aaKnown RBP19.28■□□□□ 0.68
CMTM3-213ENST00000566756 NFXL1Q6ZNB6 911 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 MICU3Q86XE3 530 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 ERO1AQ96HE7 468 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 AIFM3Q96NN9 605 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 NAPBQ9H115 298 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms