RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TBC1D2Q9BYX2 928 aa20.32■□□□□ 0.84
TSR3-202ENST00000566296 GABRQQ9UN88 632 aa20.32■□□□□ 0.84
TSR3-202ENST00000566296 FAM196BA6NMK8 535 aa20.31■□□□□ 0.84
TSR3-202ENST00000566296 H0YGN5 161 aa20.31■□□□□ 0.84
TSR3-202ENST00000566296 ADCY3O60266 1144 aa20.31■□□□□ 0.84
TSR3-202ENST00000566296 MCAMP43121 646 aa20.31■□□□□ 0.84
TSR3-202ENST00000566296 FLT3LGP49771 235 aa20.31■□□□□ 0.84
TSR3-202ENST00000566296 PROCA1Q8NCQ7 364 aaPredicted RBP20.31■□□□□ 0.84
TSR3-202ENST00000566296 DPF3Q92784 378 aa20.31■□□□□ 0.84
TSR3-202ENST00000566296 HTATIP2Q9BUP3 242 aa20.31■□□□□ 0.84
TSR3-202ENST00000566296 TNNQ9UQP3 1299 aa20.31■□□□□ 0.84
TSR3-202ENST00000566296 PABPC4Q13310 644 aaKnown RBP eCLIP20.3■□□□□ 0.84
TSR3-202ENST00000566296 OS9Q13438 667 aaPredicted RBP20.3■□□□□ 0.84
TSR3-202ENST00000566296 FAM110CQ1W6H9 321 aa20.3■□□□□ 0.84
TSR3-202ENST00000566296 TTC39AQ5SRH9 613 aa20.3■□□□□ 0.84
TSR3-202ENST00000566296 COA7Q96BR5 231 aa20.3■□□□□ 0.84
TSR3-202ENST00000566296 COLQQ9Y215 455 aaPredicted RBP20.3■□□□□ 0.84
TSR3-202ENST00000566296 DOCK3Q8IZD9 2030 aa20.29■□□□□ 0.84
TSR3-202ENST00000566296 BCAR3O75815 825 aa20.29■□□□□ 0.84
TSR3-202ENST00000566296 FXR1P51114 621 aaKnown RBP eCLIP20.29■□□□□ 0.84
TSR3-202ENST00000566296 IRF5Q13568 498 aa20.29■□□□□ 0.84
TSR3-202ENST00000566296 TREML2Q5T2D2 321 aa20.29■□□□□ 0.84
TSR3-202ENST00000566296 ANKRD13CQ8N6S4 541 aa20.29■□□□□ 0.84
TSR3-202ENST00000566296 ZNF280CQ8ND82 737 aa20.29■□□□□ 0.84
TSR3-202ENST00000566296 U2AF1L4Q8WU68 220 aaKnown RBP20.29■□□□□ 0.84
TSR3-202ENST00000566296 HERC5Q9UII4 1024 aaKnown RBP20.29■□□□□ 0.84
TSR3-202ENST00000566296 TAOK2Q9UL54 1235 aa20.29■□□□□ 0.84
TSR3-202ENST00000566296 FARP2O94887 1054 aaPredicted RBP20.28■□□□□ 0.84
TSR3-202ENST00000566296 BAG3O95817 575 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 INHAP05111 366 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 PLCG2P16885 1265 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 CAP2P40123 477 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 SPP2Q13103 211 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 CCDC158Q5M9N0 1113 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 ZKSCAN2Q63HK3 967 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 NAA16Q6N069 864 aaPredicted RBP20.28■□□□□ 0.84
TSR3-202ENST00000566296 PXYLP1Q8TE99 480 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 UNC93B1Q9H1C4 597 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 AS3MTQ9HBK9 375 aa20.28■□□□□ 0.84
TSR3-202ENST00000566296 USP17L5A8MUK1 530 aa20.27■□□□□ 0.84
TSR3-202ENST00000566296 ELNP15502 786 aa20.27■□□□□ 0.84
TSR3-202ENST00000566296 GCLCP48506 637 aaPredicted RBP20.27■□□□□ 0.84
TSR3-202ENST00000566296 HMGCS2P54868 508 aa20.27■□□□□ 0.84
TSR3-202ENST00000566296 TNNI3KQ59H18 835 aa20.27■□□□□ 0.84
TSR3-202ENST00000566296 TMEM57Q8N5G2 664 aa20.27■□□□□ 0.84
TSR3-202ENST00000566296 SH3RF3Q8TEJ3 882 aaPredicted RBP20.27■□□□□ 0.84
TSR3-202ENST00000566296 GPR108Q9NPR9 543 aa20.27■□□□□ 0.84
TSR3-202ENST00000566296 AATFQ9NY61 560 aaKnown RBP eCLIP20.27■□□□□ 0.84
TSR3-202ENST00000566296 FPGT-TNNI3KV9GXZ4 949 aa20.27■□□□□ 0.84
TSR3-202ENST00000566296 CHRDL2Q6WN34 429 aa20.26■□□□□ 0.83
TSR3-202ENST00000566296 TRIM34Q9BYJ4 488 aa20.26■□□□□ 0.83
TSR3-202ENST00000566296 DHX36Q9H2U1 1008 aaKnown RBP20.26■□□□□ 0.83
TSR3-202ENST00000566296 SNRKQ9NRH2 765 aa20.26■□□□□ 0.83
TSR3-202ENST00000566296 PI4KBQ9UBF8 816 aa20.26■□□□□ 0.83
TSR3-202ENST00000566296 SIPA1L1O43166 1804 aa20.25■□□□□ 0.83
TSR3-202ENST00000566296 CDK5RAP2Q96SN8 1893 aa20.25■□□□□ 0.83
TSR3-202ENST00000566296 SGPL1O95470 568 aa20.25■□□□□ 0.83
TSR3-202ENST00000566296 CAPN2P17655 700 aa20.25■□□□□ 0.83
TSR3-202ENST00000566296 UBE2Q1Q7Z7E8 422 aa20.25■□□□□ 0.83
TSR3-202ENST00000566296 FTSJ3Q8IY81 847 aaKnown RBP20.25■□□□□ 0.83
TSR3-202ENST00000566296 DBNDD2Q9BQY9 259 aa20.25■□□□□ 0.83
TSR3-202ENST00000566296 NR2E3Q9Y5X4 410 aa20.25■□□□□ 0.83
TSR3-202ENST00000566296 FOCADQ5VW36 1801 aa20.25■□□□□ 0.83
TSR3-202ENST00000566296 HNRNPUQ00839 825 aaKnown RBP eCLIP20.24■□□□□ 0.83
TSR3-202ENST00000566296 POLA2Q14181 598 aa20.24■□□□□ 0.83
TSR3-202ENST00000566296 CRACR2BQ8N4Y2 399 aaPredicted RBP20.24■□□□□ 0.83
TSR3-202ENST00000566296 IGSF3O75054 1194 aa20.23■□□□□ 0.83
TSR3-202ENST00000566296 SURF6O75683 361 aaKnown RBP20.23■□□□□ 0.83
TSR3-202ENST00000566296 ASNSP08243 561 aa20.23■□□□□ 0.83
TSR3-202ENST00000566296 IRX3P78415 501 aaPredicted RBP20.23■□□□□ 0.83
TSR3-202ENST00000566296 RRP1BQ14684 758 aaKnown RBP20.23■□□□□ 0.83
TSR3-202ENST00000566296 SH3D19Q5HYK7 790 aa20.23■□□□□ 0.83
TSR3-202ENST00000566296 MAPKAPK5Q8IW41 473 aa20.23■□□□□ 0.83
TSR3-202ENST00000566296 SSH3Q8TE77 659 aa20.23■□□□□ 0.83
TSR3-202ENST00000566296 DEFB118Q96PH6 123 aa20.23■□□□□ 0.83
TSR3-202ENST00000566296 ASCC2Q9H1I8 757 aaPredicted RBP20.23■□□□□ 0.83
TSR3-202ENST00000566296 TMOD4Q9NZQ9 345 aa20.23■□□□□ 0.83
TSR3-202ENST00000566296 FLT1P17948 1338 aa20.23■□□□□ 0.83
TSR3-202ENST00000566296 MYO5AQ9Y4I1 1855 aaKnown RBP20.22■□□□□ 0.83
TSR3-202ENST00000566296 PPP4CP60510 307 aa20.22■□□□□ 0.83
TSR3-202ENST00000566296 ATP8B2P98198 1209 aa20.22■□□□□ 0.83
TSR3-202ENST00000566296 TGFBRAP1Q8WUH2 860 aa20.22■□□□□ 0.83
TSR3-202ENST00000566296 C1orf115Q9H7X2 142 aa20.22■□□□□ 0.83
TSR3-202ENST00000566296 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
TSR3-202ENST00000566296 HMGCRP04035 888 aa20.21■□□□□ 0.83
TSR3-202ENST00000566296 HLA-DOAP06340 250 aa20.21■□□□□ 0.83
TSR3-202ENST00000566296 MTMR2Q13614 643 aa20.21■□□□□ 0.83
TSR3-202ENST00000566296 ITPRIPQ8IWB1 547 aa20.21■□□□□ 0.83
TSR3-202ENST00000566296 ZNF512BQ96KM6 892 aaPredicted RBP20.21■□□□□ 0.83
TSR3-202ENST00000566296 WDR18Q9BV38 432 aa20.21■□□□□ 0.83
TSR3-202ENST00000566296 PAK6Q9NQU5 681 aaPredicted RBP20.21■□□□□ 0.83
TSR3-202ENST00000566296 GINM1Q9NU53 330 aa20.21■□□□□ 0.83
TSR3-202ENST00000566296 CYP2E1P05181 493 aaPredicted RBP20.2■□□□□ 0.82
TSR3-202ENST00000566296 BACE1P56817 501 aa20.2■□□□□ 0.82
TSR3-202ENST00000566296 FOXP4Q8IVH2 680 aaPredicted RBP20.2■□□□□ 0.82
TSR3-202ENST00000566296 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.2■□□□□ 0.82
TSR3-202ENST00000566296 ZAP70P43403 619 aa20.19■□□□□ 0.82
TSR3-202ENST00000566296 ADGRA1Q86SQ6 560 aa20.19■□□□□ 0.82
TSR3-202ENST00000566296 MORF4L1Q9UBU8 362 aa20.19■□□□□ 0.82
TSR3-202ENST00000566296 MYH1P12882 1939 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms