RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 PCP11498 1178 aaKnown RBP12.01□□□□□ -0.49
SMG1-208ENST00000563448 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
SMG1-208ENST00000563448 TMX3Q96JJ7 454 aa12.01□□□□□ -0.49
SMG1-208ENST00000563448 TOMM22Q9NS69 142 aa12.01□□□□□ -0.49
SMG1-208ENST00000563448 ZSWIM5Q9P217 1185 aa12.01□□□□□ -0.49
SMG1-208ENST00000563448 ZNF70Q9UC06 446 aaPredicted RBP12.01□□□□□ -0.49
SMG1-208ENST00000563448 DAXXQ9UER7 740 aaPredicted RBP12.01□□□□□ -0.49
SMG1-208ENST00000563448 LIMCH1Q9UPQ0 1083 aa12.01□□□□□ -0.49
SMG1-208ENST00000563448 MYH4Q9Y623 1939 aa12.01□□□□□ -0.49
SMG1-208ENST00000563448 CLRN2A0PK11 232 aa12□□□□□ -0.49
SMG1-208ENST00000563448 ORC4O43929 436 aa12□□□□□ -0.49
SMG1-208ENST00000563448 GRIN3BO60391 1043 aa12□□□□□ -0.49
SMG1-208ENST00000563448 PRDM1O75626 825 aa12□□□□□ -0.49
SMG1-208ENST00000563448 LARGE1O95461 756 aa12□□□□□ -0.49
SMG1-208ENST00000563448 SLC3A2P08195 630 aaKnown RBP12□□□□□ -0.49
SMG1-208ENST00000563448 TCP10Q12799 353 aa12□□□□□ -0.49
SMG1-208ENST00000563448 ANKRD1Q15327 319 aa12□□□□□ -0.49
SMG1-208ENST00000563448 NBPF9Q3BBW0 867 aa12□□□□□ -0.49
SMG1-208ENST00000563448 FBXL16Q8N461 479 aa12□□□□□ -0.49
SMG1-208ENST00000563448 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
SMG1-208ENST00000563448 GPHNQ9NQX3 736 aaPredicted RBP12□□□□□ -0.49
SMG1-208ENST00000563448 TPCN1Q9ULQ1 816 aa12□□□□□ -0.49
SMG1-208ENST00000563448 SCN4AP35499 1836 aa12□□□□□ -0.49
SMG1-208ENST00000563448 ATAD5Q96QE3 1844 aa12□□□□□ -0.49
SMG1-208ENST00000563448 COL2A1P02458 1487 aaPredicted RBP12□□□□□ -0.49
SMG1-208ENST00000563448 ENTPD3O75355 529 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 PDE4BQ07343 736 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 RBM26Q5T8P6 1007 aaKnown RBP11.99□□□□□ -0.49
SMG1-208ENST00000563448 C16orf86Q6ZW13 317 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 SAMD7Q7Z3H4 446 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 BRF1Q92994 677 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 MYH6P13533 1939 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 DDTLA6NHG4 134 aaPredicted RBP11.99□□□□□ -0.49
SMG1-208ENST00000563448 TCP10L2B9ZVM9 353 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 DDNO94850 711 aaPredicted RBP11.99□□□□□ -0.49
SMG1-208ENST00000563448 ME3Q16798 604 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 TTC6Q86TZ1 520 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 SLC44A5Q8NCS7 719 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 ESR2Q92731 530 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 GPRC5DQ9NZD1 345 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 CNTNAP1P78357 1384 aa11.99□□□□□ -0.49
SMG1-208ENST00000563448 SH2B2O14492 632 aaPredicted RBP11.98□□□□□ -0.49
SMG1-208ENST00000563448 CDK8P49336 464 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 GABPAQ06546 454 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 APOBRQ0VD83 1088 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 CUL4AQ13619 759 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 TBC1D10BQ4KMP7 808 aaPredicted RBP11.98□□□□□ -0.49
SMG1-208ENST00000563448 IGDCC4Q8TDY8 1250 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 ZSCAN31Q96LW9 406 aaPredicted RBP11.98□□□□□ -0.49
SMG1-208ENST00000563448 ZKSCAN3Q9BRR0 538 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 TMOD2Q9NZR1 351 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 SRCAPQ6ZRS2 3230 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 H7C1D1 291 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 MYO1BO43795 1136 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 RANBP6O60518 1105 aaKnown RBP11.98□□□□□ -0.49
SMG1-208ENST00000563448 FGD1P98174 961 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 KIF4BQ2VIQ3 1234 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 FAM47AQ5JRC9 791 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 TMEM87BQ96K49 555 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 DHX36Q9H2U1 1008 aaKnown RBP11.98□□□□□ -0.49
SMG1-208ENST00000563448 VEZTQ9HBM0 779 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 SENP2Q9HC62 589 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
SMG1-208ENST00000563448 ATRNL1Q5VV63 1379 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 HLA-DOAP06340 250 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 SLURP2P0DP57 97 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 RASA1P20936 1047 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 EPS15P42566 896 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 ST3GAL1Q11201 340 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 FKBP1CQ5VVH2 108 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 FAM151AQ8WW52 585 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 MTA3Q9BTC8 594 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 EHD4Q9H223 541 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 LY9Q9HBG7 655 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 MKNK2Q9HBH9 465 aa11.97□□□□□ -0.49
SMG1-208ENST00000563448 ASTN2O75129 1339 aaPredicted RBP11.97□□□□□ -0.49
SMG1-208ENST00000563448 WDR90Q96KV7 1748 aa11.96□□□□□ -0.49
SMG1-208ENST00000563448 IFIT3O14879 490 aaKnown RBP11.96□□□□□ -0.49
SMG1-208ENST00000563448 EVCP57679 992 aa11.96□□□□□ -0.49
SMG1-208ENST00000563448 TMEM67Q5HYA8 995 aa11.96□□□□□ -0.49
SMG1-208ENST00000563448 TRPM4Q8TD43 1214 aa11.96□□□□□ -0.49
SMG1-208ENST00000563448 SH2B1Q9NRF2 756 aaPredicted RBP11.96□□□□□ -0.49
SMG1-208ENST00000563448 SERPINB13Q9UIV8 391 aa11.96□□□□□ -0.49
SMG1-208ENST00000563448 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
SMG1-208ENST00000563448 ANGEL1Q9UNK9 670 aaKnown RBP11.96□□□□□ -0.49
SMG1-208ENST00000563448 UTRNP46939 3433 aa11.96□□□□□ -0.49
SMG1-208ENST00000563448 TFAP4Q01664 338 aa11.96□□□□□ -0.5
SMG1-208ENST00000563448 STK3Q13188 491 aa11.96□□□□□ -0.5
SMG1-208ENST00000563448 SEC23AQ15436 765 aa11.96□□□□□ -0.5
SMG1-208ENST00000563448 FAM83AQ86UY5 434 aa11.96□□□□□ -0.5
SMG1-208ENST00000563448 ZSCAN29Q8IWY8 852 aaPredicted RBP11.96□□□□□ -0.5
SMG1-208ENST00000563448 ZNF444Q8N0Y2 327 aaPredicted RBP11.96□□□□□ -0.5
SMG1-208ENST00000563448 NECAB1Q8N987 351 aa11.96□□□□□ -0.5
SMG1-208ENST00000563448 ZSCAN10Q96SZ4 725 aaPredicted RBP11.96□□□□□ -0.5
SMG1-208ENST00000563448 DNAJC18Q9H819 358 aa11.96□□□□□ -0.5
SMG1-208ENST00000563448 ZNF287Q9HBT7 754 aa11.96□□□□□ -0.5
SMG1-208ENST00000563448 PI4KBQ9UBF8 816 aa11.96□□□□□ -0.5
SMG1-208ENST00000563448 SWAP70Q9UH65 585 aa11.96□□□□□ -0.5
SMG1-208ENST00000563448 PGAP2Q9UHJ9 254 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms