RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 ZNF280CQ8ND82 737 aa23.92■■□□□ 1.42
CDH11-203ENST00000562325 NSUN4Q96CB9 384 aaKnown RBP23.92■■□□□ 1.42
CDH11-203ENST00000562325 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.92■■□□□ 1.42
CDH11-203ENST00000562325 HERC5Q9UII4 1024 aaKnown RBP23.92■■□□□ 1.42
CDH11-203ENST00000562325 SPATA5Q8NB90 893 aa23.91■■□□□ 1.42
CDH11-203ENST00000562325 ZNF384Q8TF68 577 aa23.91■■□□□ 1.42
CDH11-203ENST00000562325 HMG20BQ9P0W2 317 aa23.91■■□□□ 1.42
CDH11-203ENST00000562325 ELNP15502 786 aa23.9■■□□□ 1.42
CDH11-203ENST00000562325 ARID4AP29374 1257 aaPredicted RBP23.9■■□□□ 1.42
CDH11-203ENST00000562325 CAP2P40123 477 aa23.9■■□□□ 1.42
CDH11-203ENST00000562325 RARSP54136 660 aaKnown RBP23.9■■□□□ 1.42
CDH11-203ENST00000562325 ANKRD13CQ8N6S4 541 aa23.9■■□□□ 1.42
CDH11-203ENST00000562325 ANKLE1Q8NAG6 615 aa23.9■■□□□ 1.42
CDH11-203ENST00000562325 SH3D19Q5HYK7 790 aa23.89■■□□□ 1.41
CDH11-203ENST00000562325 TREML2Q5T2D2 321 aa23.89■■□□□ 1.41
CDH11-203ENST00000562325 EVI5O60447 810 aa23.88■■□□□ 1.41
CDH11-203ENST00000562325 TFRCP02786 760 aaKnown RBP23.88■■□□□ 1.41
CDH11-203ENST00000562325 UQCRFS1P1P0C7P4 283 aa23.88■■□□□ 1.41
CDH11-203ENST00000562325 SPP2Q13103 211 aa23.88■■□□□ 1.41
CDH11-203ENST00000562325 GORABQ5T7V8 394 aa23.88■■□□□ 1.41
CDH11-203ENST00000562325 DEFB118Q96PH6 123 aa23.88■■□□□ 1.41
CDH11-203ENST00000562325 DHX36Q9H2U1 1008 aaKnown RBP23.88■■□□□ 1.41
CDH11-203ENST00000562325 AS3MTQ9HBK9 375 aa23.88■■□□□ 1.41
CDH11-203ENST00000562325 LOC285556D6RIA3 1793 aa23.88■■□□□ 1.41
CDH11-203ENST00000562325 USP17L5A8MUK1 530 aa23.87■■□□□ 1.41
CDH11-203ENST00000562325 HMGCRP04035 888 aa23.87■■□□□ 1.41
CDH11-203ENST00000562325 NEUROD6Q96NK8 337 aa23.87■■□□□ 1.41
CDH11-203ENST00000562325 GINM1Q9NU53 330 aa23.87■■□□□ 1.41
CDH11-203ENST00000562325 IPO8O15397 1037 aaKnown RBP23.86■■□□□ 1.41
CDH11-203ENST00000562325 PLCG2P16885 1265 aa23.86■■□□□ 1.41
CDH11-203ENST00000562325 WDR18Q9BV38 432 aa23.86■■□□□ 1.41
CDH11-203ENST00000562325 PI4KBQ9UBF8 816 aa23.86■■□□□ 1.41
CDH11-203ENST00000562325 MORF4L1Q9UBU8 362 aa23.86■■□□□ 1.41
CDH11-203ENST00000562325 SLURP2P0DP57 97 aa23.85■■□□□ 1.41
CDH11-203ENST00000562325 NECAB2Q7Z6G3 386 aa23.85■■□□□ 1.41
CDH11-203ENST00000562325 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.85■■□□□ 1.41
CDH11-203ENST00000562325 BAG3O95817 575 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 GNAI2P04899 355 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 ASNSP08243 561 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 HMGCS2P54868 508 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 TEX11Q8IYF3 940 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 NOL10Q9BSC4 688 aaKnown RBP23.84■■□□□ 1.41
CDH11-203ENST00000562325 ASCC2Q9H1I8 757 aaPredicted RBP23.84■■□□□ 1.41
CDH11-203ENST00000562325 GPR108Q9NPR9 543 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 RAI14Q9P0K7 980 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.84■■□□□ 1.41
CDH11-203ENST00000562325 GJD2Q9UKL4 321 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 LAMA3Q16787 3333 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 RPTORQ8N122 1335 aa23.84■■□□□ 1.41
CDH11-203ENST00000562325 HOXA7P31268 230 aaPredicted RBP23.83■■□□□ 1.41
CDH11-203ENST00000562325 G3BP1Q13283 466 aaKnown RBP eCLIP23.83■■□□□ 1.41
CDH11-203ENST00000562325 CCDC84Q86UT8 332 aaPredicted RBP23.83■■□□□ 1.41
CDH11-203ENST00000562325 METTL16Q86W50 562 aaKnown RBP23.83■■□□□ 1.41
CDH11-203ENST00000562325 LRP2BPQ9P2M1 347 aa23.83■■□□□ 1.41
CDH11-203ENST00000562325 MCAMP43121 646 aa23.82■■□□□ 1.4
CDH11-203ENST00000562325 BACE1P56817 501 aa23.82■■□□□ 1.4
CDH11-203ENST00000562325 PPP4CP60510 307 aa23.82■■□□□ 1.4
CDH11-203ENST00000562325 FAM196BA6NMK8 535 aa23.81■■□□□ 1.4
CDH11-203ENST00000562325 C19orf81C9J6K1 198 aa23.81■■□□□ 1.4
CDH11-203ENST00000562325 PI16Q6UXB8 463 aa23.81■■□□□ 1.4
CDH11-203ENST00000562325 TBC1D9Q6ZT07 1266 aa23.81■■□□□ 1.4
CDH11-203ENST00000562325 FOXP4Q8IVH2 680 aaPredicted RBP23.81■■□□□ 1.4
CDH11-203ENST00000562325 GTF3C2Q8WUA4 911 aaPredicted RBP23.81■■□□□ 1.4
CDH11-203ENST00000562325 PAWRQ96IZ0 340 aaKnown RBP23.81■■□□□ 1.4
CDH11-203ENST00000562325 HMX1Q9NP08 348 aaPredicted RBP23.81■■□□□ 1.4
CDH11-203ENST00000562325 TAOK2Q9UL54 1235 aa23.81■■□□□ 1.4
CDH11-203ENST00000562325 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.81■■□□□ 1.4
CDH11-203ENST00000562325 DOCK3Q8IZD9 2030 aa23.81■■□□□ 1.4
CDH11-203ENST00000562325 XRCC5P13010 732 aaKnown RBP23.8■■□□□ 1.4
CDH11-203ENST00000562325 BMP8BP34820 402 aa23.8■■□□□ 1.4
CDH11-203ENST00000562325 GPR153Q6NV75 609 aa23.8■■□□□ 1.4
CDH11-203ENST00000562325 ATF7IPQ6VMQ6 1270 aa23.8■■□□□ 1.4
CDH11-203ENST00000562325 TRMT44Q8IYL2 757 aaKnown RBP23.8■■□□□ 1.4
CDH11-203ENST00000562325 SOCS4Q8WXH5 440 aa23.8■■□□□ 1.4
CDH11-203ENST00000562325 ZNF512BQ96KM6 892 aaPredicted RBP23.8■■□□□ 1.4
CDH11-203ENST00000562325 TMOD4Q9NZQ9 345 aa23.8■■□□□ 1.4
CDH11-203ENST00000562325 TRIM27P14373 513 aa23.79■■□□□ 1.4
CDH11-203ENST00000562325 IRX3P78415 501 aaPredicted RBP23.79■■□□□ 1.4
CDH11-203ENST00000562325 NAA16Q6N069 864 aaPredicted RBP23.79■■□□□ 1.4
CDH11-203ENST00000562325 NBPF3Q9H094 633 aa23.79■■□□□ 1.4
CDH11-203ENST00000562325 RRP1BQ14684 758 aaKnown RBP23.78■■□□□ 1.4
CDH11-203ENST00000562325 MAP3K21Q5TCX8 1036 aa23.78■■□□□ 1.4
CDH11-203ENST00000562325 CERS3Q8IU89 383 aa23.78■■□□□ 1.4
CDH11-203ENST00000562325 SH3RF3Q8TEJ3 882 aaPredicted RBP23.78■■□□□ 1.4
CDH11-203ENST00000562325 ATAD5Q96QE3 1844 aa23.77■■□□□ 1.4
CDH11-203ENST00000562325 PNMA6EA0A0J9YXQ4 647 aa23.77■■□□□ 1.4
CDH11-203ENST00000562325 MTMR2Q13614 643 aa23.77■■□□□ 1.4
CDH11-203ENST00000562325 CCDC158Q5M9N0 1113 aa23.77■■□□□ 1.4
CDH11-203ENST00000562325 TMED8Q6PL24 325 aaPredicted RBP23.77■■□□□ 1.4
CDH11-203ENST00000562325 GDF15Q99988 308 aa23.77■■□□□ 1.4
CDH11-203ENST00000562325 OGDHLQ9ULD0 1010 aa23.77■■□□□ 1.4
CDH11-203ENST00000562325 MAST2Q6P0Q8 1798 aa23.76■■□□□ 1.39
CDH11-203ENST00000562325 USP17L10C9JJH3 530 aa23.76■■□□□ 1.39
CDH11-203ENST00000562325 MAPK4P31152 587 aa23.76■■□□□ 1.39
CDH11-203ENST00000562325 GPRC5AQ8NFJ5 357 aa23.76■■□□□ 1.39
CDH11-203ENST00000562325 NUDT12Q9BQG2 462 aa23.76■■□□□ 1.39
CDH11-203ENST00000562325 AATFQ9NY61 560 aaKnown RBP eCLIP23.76■■□□□ 1.39
CDH11-203ENST00000562325 FLT1P17948 1338 aa23.76■■□□□ 1.39
CDH11-203ENST00000562325 HERVK_113P62684 666 aa23.75■■□□□ 1.39
CDH11-203ENST00000562325 TRIM34Q9BYJ4 488 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms