RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TREML2Q5T2D2 321 aa14.6□□□□□ -0.07
CARMIL3-204ENST00000561354 CCDC84Q86UT8 332 aaPredicted RBP14.6□□□□□ -0.07
CARMIL3-204ENST00000561354 ANKRD13CQ8N6S4 541 aa14.6□□□□□ -0.07
CARMIL3-204ENST00000561354 PRO3102Q9H379 93 aa14.6□□□□□ -0.07
CARMIL3-204ENST00000561354 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.6□□□□□ -0.07
CARMIL3-204ENST00000561354 CEP290O15078 2479 aa14.59□□□□□ -0.07
CARMIL3-204ENST00000561354 CAP2P40123 477 aa14.59□□□□□ -0.07
CARMIL3-204ENST00000561354 GCLCP48506 637 aaPredicted RBP14.59□□□□□ -0.07
CARMIL3-204ENST00000561354 SPP2Q13103 211 aa14.59□□□□□ -0.07
CARMIL3-204ENST00000561354 GORABQ5T7V8 394 aa14.59□□□□□ -0.07
CARMIL3-204ENST00000561354 TBC1D9Q6ZT07 1266 aa14.59□□□□□ -0.07
CARMIL3-204ENST00000561354 ZNF280CQ8ND82 737 aa14.59□□□□□ -0.07
CARMIL3-204ENST00000561354 PAK6Q9NQU5 681 aaPredicted RBP14.59□□□□□ -0.07
CARMIL3-204ENST00000561354 TRIOBPQ9H2D6 2365 aa14.59□□□□□ -0.07
CARMIL3-204ENST00000561354 FAM196BA6NMK8 535 aa14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 ZBTB7BO15156 539 aaPredicted RBP14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 UQCRFS1P1P0C7P4 283 aa14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 PABPC4Q13310 644 aaKnown RBP eCLIP14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 PI16Q6UXB8 463 aa14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 DEFB118Q96PH6 123 aa14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 CRISPLD2Q9H0B8 497 aa14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 RAI14Q9P0K7 980 aa14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 HERC5Q9UII4 1024 aaKnown RBP14.58□□□□□ -0.08
CARMIL3-204ENST00000561354 USP17L5A8MUK1 530 aa14.57□□□□□ -0.08
CARMIL3-204ENST00000561354 TFRCP02786 760 aaKnown RBP14.57□□□□□ -0.08
CARMIL3-204ENST00000561354 GNAI2P04899 355 aa14.57□□□□□ -0.08
CARMIL3-204ENST00000561354 MCAMP43121 646 aa14.57□□□□□ -0.08
CARMIL3-204ENST00000561354 G3BP1Q13283 466 aaKnown RBP eCLIP14.57□□□□□ -0.08
CARMIL3-204ENST00000561354 SH3D19Q5HYK7 790 aa14.57□□□□□ -0.08
CARMIL3-204ENST00000561354 AS3MTQ9HBK9 375 aa14.57□□□□□ -0.08
CARMIL3-204ENST00000561354 LRP2BPQ9P2M1 347 aa14.57□□□□□ -0.08
CARMIL3-204ENST00000561354 PI4KBQ9UBF8 816 aa14.57□□□□□ -0.08
CARMIL3-204ENST00000561354 DOCK3Q8IZD9 2030 aa14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 LOC285556D6RIA3 1793 aa14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 PNMA6EA0A0J9YXQ4 647 aa14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 A0A1W2PPC1 479 aa14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 TRIM27P14373 513 aa14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 HMGCS2P54868 508 aa14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 RRP1BQ14684 758 aaKnown RBP14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 TEX11Q8IYF3 940 aa14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 ASCC2Q9H1I8 757 aaPredicted RBP14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 DHX36Q9H2U1 1008 aaKnown RBP14.56□□□□□ -0.08
CARMIL3-204ENST00000561354 EVI5O60447 810 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 IGSF3O75054 1194 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 BAG3O95817 575 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 PPP4CP60510 307 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 ATF7IPQ6VMQ6 1270 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 ANKLE1Q8NAG6 615 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 SH3RF3Q8TEJ3 882 aaPredicted RBP14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 NOL10Q9BSC4 688 aaKnown RBP14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 WDR18Q9BV38 432 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 GPR108Q9NPR9 543 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 GJD2Q9UKL4 321 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 TAOK2Q9UL54 1235 aa14.55□□□□□ -0.08
CARMIL3-204ENST00000561354 HMGCRP04035 888 aa14.54□□□□□ -0.08
CARMIL3-204ENST00000561354 ASNSP08243 561 aa14.54□□□□□ -0.08
CARMIL3-204ENST00000561354 PLCG2P16885 1265 aa14.54□□□□□ -0.08
CARMIL3-204ENST00000561354 NAA16Q6N069 864 aaPredicted RBP14.54□□□□□ -0.08
CARMIL3-204ENST00000561354 METTL16Q86W50 562 aaKnown RBP14.54□□□□□ -0.08
CARMIL3-204ENST00000561354 FOXP4Q8IVH2 680 aaPredicted RBP14.54□□□□□ -0.08
CARMIL3-204ENST00000561354 PAWRQ96IZ0 340 aaKnown RBP14.54□□□□□ -0.08
CARMIL3-204ENST00000561354 MORF4L1Q9UBU8 362 aa14.54□□□□□ -0.08
CARMIL3-204ENST00000561354 ATAD5Q96QE3 1844 aa14.54□□□□□ -0.08
CARMIL3-204ENST00000561354 RPTORQ8N122 1335 aa14.53□□□□□ -0.08
CARMIL3-204ENST00000561354 CCER2I3L3R5 266 aa14.53□□□□□ -0.08
CARMIL3-204ENST00000561354 HOXA7P31268 230 aaPredicted RBP14.53□□□□□ -0.08
CARMIL3-204ENST00000561354 BACE1P56817 501 aa14.53□□□□□ -0.08
CARMIL3-204ENST00000561354 NECAB2Q7Z6G3 386 aa14.53□□□□□ -0.08
CARMIL3-204ENST00000561354 ZNF512BQ96KM6 892 aaPredicted RBP14.53□□□□□ -0.08
CARMIL3-204ENST00000561354 GINM1Q9NU53 330 aa14.53□□□□□ -0.08
CARMIL3-204ENST00000561354 AATFQ9NY61 560 aaKnown RBP eCLIP14.53□□□□□ -0.08
CARMIL3-204ENST00000561354 C19orf81C9J6K1 198 aa14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 MTMR2Q13614 643 aa14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 POLA2Q14181 598 aa14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 TNNI3KQ59H18 835 aa14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 CCDC158Q5M9N0 1113 aa14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 FRAT1Q92837 279 aaPredicted RBP14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 HMX1Q9NP08 348 aaPredicted RBP14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 TMOD4Q9NZQ9 345 aa14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 TNNQ9UQP3 1299 aa14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 FPGT-TNNI3KV9GXZ4 949 aa14.52□□□□□ -0.09
CARMIL3-204ENST00000561354 SIPA1L1O43166 1804 aa14.51□□□□□ -0.09
CARMIL3-204ENST00000561354 BCAR3O75815 825 aa14.51□□□□□ -0.09
CARMIL3-204ENST00000561354 IRX3P78415 501 aaPredicted RBP14.51□□□□□ -0.09
CARMIL3-204ENST00000561354 TTC39AQ5SRH9 613 aa14.51□□□□□ -0.09
CARMIL3-204ENST00000561354 SSH3Q8TE77 659 aa14.51□□□□□ -0.09
CARMIL3-204ENST00000561354 TGFBRAP1Q8WUH2 860 aa14.51□□□□□ -0.09
CARMIL3-204ENST00000561354 CLUAP1Q96AJ1 413 aa14.51□□□□□ -0.09
CARMIL3-204ENST00000561354 DNAJC18Q9H819 358 aa14.51□□□□□ -0.09
CARMIL3-204ENST00000561354 SNRKQ9NRH2 765 aa14.51□□□□□ -0.09
CARMIL3-204ENST00000561354 MAST2Q6P0Q8 1798 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 FLT1P17948 1338 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 USP17L10C9JJH3 530 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 CYP2E1P05181 493 aaPredicted RBP14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 XRCC5P13010 732 aaKnown RBP14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 JAG1P78504 1218 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 ATP8B2P98198 1209 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms