RNA–Protein interactions for RNA: ENST00000561256.5

USP3-AS1-210, USP3 antisense RNA 1, humanhuman

TSL 3

Gene USP3-AS1, Length 562 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-210ENST00000561256 NEUROD6Q96NK8 337 aa21.35■■□□□ 1.01
USP3-AS1-210ENST00000561256 SZT2Q5T011 3432 aa21.35■■□□□ 1.01
USP3-AS1-210ENST00000561256 LDHCP07864 332 aa21.34■■□□□ 1.01
USP3-AS1-210ENST00000561256 GSTO1P78417 241 aa21.34■■□□□ 1.01
USP3-AS1-210ENST00000561256 ZNF280CQ8ND82 737 aa21.34■■□□□ 1.01
USP3-AS1-210ENST00000561256 ZNF384Q8TF68 577 aa21.34■■□□□ 1.01
USP3-AS1-210ENST00000561256 A0A1W2PPC1 479 aa21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 MAP4K4O95819 1239 aaPredicted RBP21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 GCLCP48506 637 aaPredicted RBP21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 PABPC4Q13310 644 aaKnown RBP eCLIP21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 GORABQ5T7V8 394 aa21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 TRMT2AQ8IZ69 625 aaKnown RBP21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 PAWRQ96IZ0 340 aaKnown RBP21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 TBC1D2Q9BYX2 928 aa21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 CRISPLD2Q9H0B8 497 aa21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 HMG20BQ9P0W2 317 aa21.33■■□□□ 1.01
USP3-AS1-210ENST00000561256 GNAI3P08754 354 aa21.32■■□□□ 1
USP3-AS1-210ENST00000561256 HMGCS2P54868 508 aa21.32■■□□□ 1
USP3-AS1-210ENST00000561256 TBC1D9Q6ZT07 1266 aa21.32■■□□□ 1
USP3-AS1-210ENST00000561256 SPATA5Q8NB90 893 aa21.32■■□□□ 1
USP3-AS1-210ENST00000561256 NSUN4Q96CB9 384 aaKnown RBP21.32■■□□□ 1
USP3-AS1-210ENST00000561256 RAI14Q9P0K7 980 aa21.32■■□□□ 1
USP3-AS1-210ENST00000561256 DOCK3Q8IZD9 2030 aa21.32■■□□□ 1
USP3-AS1-210ENST00000561256 COL2A1P02458 1487 aaPredicted RBP21.32■■□□□ 1
USP3-AS1-210ENST00000561256 RANBP2P49792 3224 aaKnown RBP21.31■■□□□ 1
USP3-AS1-210ENST00000561256 LOC285556D6RIA3 1793 aa21.31■■□□□ 1
USP3-AS1-210ENST00000561256 CAP2P40123 477 aa21.31■■□□□ 1
USP3-AS1-210ENST00000561256 PI16Q6UXB8 463 aa21.31■■□□□ 1
USP3-AS1-210ENST00000561256 NECAB2Q7Z6G3 386 aa21.31■■□□□ 1
USP3-AS1-210ENST00000561256 ATAD5Q96QE3 1844 aa21.3■■□□□ 1
USP3-AS1-210ENST00000561256 USP17L5A8MUK1 530 aa21.3■■□□□ 1
USP3-AS1-210ENST00000561256 HMGCRP04035 888 aa21.3■■□□□ 1
USP3-AS1-210ENST00000561256 TEX11Q8IYF3 940 aa21.3■■□□□ 1
USP3-AS1-210ENST00000561256 DIS3LQ8TF46 1054 aaKnown RBP21.3■■□□□ 1
USP3-AS1-210ENST00000561256 AS3MTQ9HBK9 375 aa21.3■■□□□ 1
USP3-AS1-210ENST00000561256 STAP2Q9UGK3 403 aa21.3■■□□□ 1
USP3-AS1-210ENST00000561256 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.3■■□□□ 1
USP3-AS1-210ENST00000561256 MTX1Q13505 466 aa21.29■■□□□ 1
USP3-AS1-210ENST00000561256 NOL10Q9BSC4 688 aaKnown RBP21.29■■□□□ 1
USP3-AS1-210ENST00000561256 ASCC2Q9H1I8 757 aaPredicted RBP21.29■■□□□ 1
USP3-AS1-210ENST00000561256 HERC5Q9UII4 1024 aaKnown RBP21.29■■□□□ 1
USP3-AS1-210ENST00000561256 ARID4AP29374 1257 aaPredicted RBP21.28■■□□□ 1
USP3-AS1-210ENST00000561256 RRP1BQ14684 758 aaKnown RBP21.28■■□□□ 1
USP3-AS1-210ENST00000561256 ANKLE1Q8NAG6 615 aa21.28■■□□□ 1
USP3-AS1-210ENST00000561256 HMX1Q9NP08 348 aaPredicted RBP21.28■■□□□ 1
USP3-AS1-210ENST00000561256 LRP2BPQ9P2M1 347 aa21.28■■□□□ 1
USP3-AS1-210ENST00000561256 RPTORQ8N122 1335 aa21.28■■□□□ 1
USP3-AS1-210ENST00000561256 RARSP54136 660 aaKnown RBP21.27■■□□□ 1
USP3-AS1-210ENST00000561256 SH3D19Q5HYK7 790 aa21.27■■□□□ 1
USP3-AS1-210ENST00000561256 ARHGAP45Q92619 1136 aa21.27■■□□□ 1
USP3-AS1-210ENST00000561256 PI4KBQ9UBF8 816 aa21.27■■□□□ 1
USP3-AS1-210ENST00000561256 GJD2Q9UKL4 321 aa21.27■■□□□ 1
USP3-AS1-210ENST00000561256 ALPK3Q96L96 1907 aa21.26■□□□□ 0.99
USP3-AS1-210ENST00000561256 SOX1O00570 391 aaPredicted RBP21.26■□□□□ 0.99
USP3-AS1-210ENST00000561256 UQCRFS1P1P0C7P4 283 aa21.26■□□□□ 0.99
USP3-AS1-210ENST00000561256 MCAMP43121 646 aa21.26■□□□□ 0.99
USP3-AS1-210ENST00000561256 IRX3P78415 501 aaPredicted RBP21.26■□□□□ 0.99
USP3-AS1-210ENST00000561256 C7orf61Q8IZ16 206 aa21.26■□□□□ 0.99
USP3-AS1-210ENST00000561256 SH3RF3Q8TEJ3 882 aaPredicted RBP21.26■□□□□ 0.99
USP3-AS1-210ENST00000561256 TRIM32Q13049 653 aa21.25■□□□□ 0.99
USP3-AS1-210ENST00000561256 G3BP1Q13283 466 aaKnown RBP eCLIP21.25■□□□□ 0.99
USP3-AS1-210ENST00000561256 MTMR2Q13614 643 aa21.25■□□□□ 0.99
USP3-AS1-210ENST00000561256 LRCH3Q96II8 777 aa21.25■□□□□ 0.99
USP3-AS1-210ENST00000561256 NBPF3Q9H094 633 aa21.25■□□□□ 0.99
USP3-AS1-210ENST00000561256 DHX36Q9H2U1 1008 aaKnown RBP21.25■□□□□ 0.99
USP3-AS1-210ENST00000561256 TMOD4Q9NZQ9 345 aa21.25■□□□□ 0.99
USP3-AS1-210ENST00000561256 MORF4L1Q9UBU8 362 aa21.25■□□□□ 0.99
USP3-AS1-210ENST00000561256 BAG3O95817 575 aa21.24■□□□□ 0.99
USP3-AS1-210ENST00000561256 BACE1P56817 501 aa21.24■□□□□ 0.99
USP3-AS1-210ENST00000561256 SLC17A8Q8NDX2 589 aa21.24■□□□□ 0.99
USP3-AS1-210ENST00000561256 TRIB2Q92519 343 aa21.24■□□□□ 0.99
USP3-AS1-210ENST00000561256 WDR18Q9BV38 432 aa21.24■□□□□ 0.99
USP3-AS1-210ENST00000561256 AATFQ9NY61 560 aaKnown RBP eCLIP21.24■□□□□ 0.99
USP3-AS1-210ENST00000561256 ZMYND8Q9ULU4 1186 aaPredicted RBP21.24■□□□□ 0.99
USP3-AS1-210ENST00000561256 GNAI2P04899 355 aa21.23■□□□□ 0.99
USP3-AS1-210ENST00000561256 ASNSP08243 561 aa21.23■□□□□ 0.99
USP3-AS1-210ENST00000561256 CYP2B6P20813 491 aa21.23■□□□□ 0.99
USP3-AS1-210ENST00000561256 NAA16Q6N069 864 aaPredicted RBP21.23■□□□□ 0.99
USP3-AS1-210ENST00000561256 TRIM34Q9BYJ4 488 aa21.23■□□□□ 0.99
USP3-AS1-210ENST00000561256 PLCG2P16885 1265 aa21.22■□□□□ 0.99
USP3-AS1-210ENST00000561256 BMP8BP34820 402 aa21.22■□□□□ 0.99
USP3-AS1-210ENST00000561256 HNRNPUQ00839 825 aaKnown RBP eCLIP21.22■□□□□ 0.99
USP3-AS1-210ENST00000561256 CRACR2BQ8N4Y2 399 aaPredicted RBP21.22■□□□□ 0.99
USP3-AS1-210ENST00000561256 P2RX7Q99572 595 aaKnown RBP21.22■□□□□ 0.99
USP3-AS1-210ENST00000561256 GDF15Q99988 308 aa21.22■□□□□ 0.99
USP3-AS1-210ENST00000561256 NUDT12Q9BQG2 462 aa21.22■□□□□ 0.99
USP3-AS1-210ENST00000561256 C11orf49Q9H6J7 331 aa21.22■□□□□ 0.99
USP3-AS1-210ENST00000561256 DDX60LQ5H9U9 1706 aaKnown RBP21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 PLXNB2O15031 1838 aa21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 PNMA6EA0A0J9YXQ4 647 aa21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 HOXA7P31268 230 aaPredicted RBP21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 TTC39AQ5SRH9 613 aa21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 MAPKAPK5Q8IW41 473 aa21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 GPRC5AQ8NFJ5 357 aa21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 TGFBRAP1Q8WUH2 860 aa21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 SOCS4Q8WXH5 440 aa21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 SNRKQ9NRH2 765 aa21.21■□□□□ 0.99
USP3-AS1-210ENST00000561256 SIPA1L1O43166 1804 aa21.2■□□□□ 0.98
USP3-AS1-210ENST00000561256 C19orf81C9J6K1 198 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms