RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 ERICH6Q7L0X2 663 aa23.55■■□□□ 1.36
CRNDE-210ENST00000560912 PROCA1Q8NCQ7 364 aaPredicted RBP23.55■■□□□ 1.36
CRNDE-210ENST00000560912 OSBPL5Q9H0X9 879 aaPredicted RBP23.55■■□□□ 1.36
CRNDE-210ENST00000560912 AKAP2Q9Y2D5 859 aa23.55■■□□□ 1.36
CRNDE-210ENST00000560912 DDX60LQ5H9U9 1706 aaKnown RBP23.54■■□□□ 1.36
CRNDE-210ENST00000560912 FAM196BA6NMK8 535 aa23.54■■□□□ 1.36
CRNDE-210ENST00000560912 ANKRD13CQ8N6S4 541 aa23.54■■□□□ 1.36
CRNDE-210ENST00000560912 CRISPLD2Q9H0B8 497 aa23.54■■□□□ 1.36
CRNDE-210ENST00000560912 HMG20BQ9P0W2 317 aa23.54■■□□□ 1.36
CRNDE-210ENST00000560912 PNMA3Q9UL41 463 aa23.54■■□□□ 1.36
CRNDE-210ENST00000560912 SRGAP3O43295 1099 aa23.53■■□□□ 1.36
CRNDE-210ENST00000560912 MAP4K4O95819 1239 aaPredicted RBP23.53■■□□□ 1.36
CRNDE-210ENST00000560912 NSUN4Q96CB9 384 aaKnown RBP23.53■■□□□ 1.36
CRNDE-210ENST00000560912 DEFB118Q96PH6 123 aa23.53■■□□□ 1.36
CRNDE-210ENST00000560912 PI16Q6UXB8 463 aa23.52■■□□□ 1.36
CRNDE-210ENST00000560912 COA7Q96BR5 231 aa23.52■■□□□ 1.36
CRNDE-210ENST00000560912 TBC1D2Q9BYX2 928 aa23.52■■□□□ 1.36
CRNDE-210ENST00000560912 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.52■■□□□ 1.36
CRNDE-210ENST00000560912 GNAI3P08754 354 aa23.51■■□□□ 1.35
CRNDE-210ENST00000560912 ARID4AP29374 1257 aaPredicted RBP23.51■■□□□ 1.35
CRNDE-210ENST00000560912 A0A1W2PPC1 479 aa23.5■■□□□ 1.35
CRNDE-210ENST00000560912 RARSP54136 660 aaKnown RBP23.5■■□□□ 1.35
CRNDE-210ENST00000560912 GSTO1P78417 241 aa23.5■■□□□ 1.35
CRNDE-210ENST00000560912 SPP2Q13103 211 aa23.5■■□□□ 1.35
CRNDE-210ENST00000560912 SPATA5Q8NB90 893 aa23.5■■□□□ 1.35
CRNDE-210ENST00000560912 ZNF280CQ8ND82 737 aa23.5■■□□□ 1.35
CRNDE-210ENST00000560912 ARHGAP45Q92619 1136 aa23.5■■□□□ 1.35
CRNDE-210ENST00000560912 EVI5O60447 810 aa23.49■■□□□ 1.35
CRNDE-210ENST00000560912 TFRCP02786 760 aaKnown RBP23.49■■□□□ 1.35
CRNDE-210ENST00000560912 LDHCP07864 332 aa23.49■■□□□ 1.35
CRNDE-210ENST00000560912 CAP2P40123 477 aa23.49■■□□□ 1.35
CRNDE-210ENST00000560912 GCLCP48506 637 aaPredicted RBP23.49■■□□□ 1.35
CRNDE-210ENST00000560912 RRP1BQ14684 758 aaKnown RBP23.49■■□□□ 1.35
CRNDE-210ENST00000560912 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.49■■□□□ 1.35
CRNDE-210ENST00000560912 HMGCS2P54868 508 aa23.48■■□□□ 1.35
CRNDE-210ENST00000560912 SH3D19Q5HYK7 790 aa23.48■■□□□ 1.35
CRNDE-210ENST00000560912 TBC1D9Q6ZT07 1266 aa23.48■■□□□ 1.35
CRNDE-210ENST00000560912 NEUROD6Q96NK8 337 aa23.48■■□□□ 1.35
CRNDE-210ENST00000560912 TAOK2Q9UL54 1235 aa23.48■■□□□ 1.35
CRNDE-210ENST00000560912 HMGCRP04035 888 aa23.47■■□□□ 1.35
CRNDE-210ENST00000560912 MCAMP43121 646 aa23.47■■□□□ 1.35
CRNDE-210ENST00000560912 DIS3LQ8TF46 1054 aaKnown RBP23.47■■□□□ 1.35
CRNDE-210ENST00000560912 PAWRQ96IZ0 340 aaKnown RBP23.47■■□□□ 1.35
CRNDE-210ENST00000560912 HERC5Q9UII4 1024 aaKnown RBP23.47■■□□□ 1.35
CRNDE-210ENST00000560912 FRMPD3Q5JV73 1810 aa23.47■■□□□ 1.35
CRNDE-210ENST00000560912 PABPC4Q13310 644 aaKnown RBP eCLIP23.46■■□□□ 1.35
CRNDE-210ENST00000560912 TEX11Q8IYF3 940 aa23.46■■□□□ 1.35
CRNDE-210ENST00000560912 ASCC2Q9H1I8 757 aaPredicted RBP23.46■■□□□ 1.35
CRNDE-210ENST00000560912 GJD2Q9UKL4 321 aa23.46■■□□□ 1.35
CRNDE-210ENST00000560912 MYH1P12882 1939 aa23.45■■□□□ 1.35
CRNDE-210ENST00000560912 USP17L5A8MUK1 530 aa23.45■■□□□ 1.34
CRNDE-210ENST00000560912 ANKLE1Q8NAG6 615 aa23.45■■□□□ 1.34
CRNDE-210ENST00000560912 RAI14Q9P0K7 980 aa23.45■■□□□ 1.34
CRNDE-210ENST00000560912 MORF4L1Q9UBU8 362 aa23.45■■□□□ 1.34
CRNDE-210ENST00000560912 GORABQ5T7V8 394 aa23.44■■□□□ 1.34
CRNDE-210ENST00000560912 SH3RF3Q8TEJ3 882 aaPredicted RBP23.44■■□□□ 1.34
CRNDE-210ENST00000560912 COL6A3P12111 3177 aa23.43■■□□□ 1.34
CRNDE-210ENST00000560912 SOX1O00570 391 aaPredicted RBP23.43■■□□□ 1.34
CRNDE-210ENST00000560912 NECAB2Q7Z6G3 386 aa23.43■■□□□ 1.34
CRNDE-210ENST00000560912 WDR18Q9BV38 432 aa23.43■■□□□ 1.34
CRNDE-210ENST00000560912 DNAJC18Q9H819 358 aa23.43■■□□□ 1.34
CRNDE-210ENST00000560912 AS3MTQ9HBK9 375 aa23.43■■□□□ 1.34
CRNDE-210ENST00000560912 RPTORQ8N122 1335 aa23.42■■□□□ 1.34
CRNDE-210ENST00000560912 PNMA6EA0A0J9YXQ4 647 aa23.42■■□□□ 1.34
CRNDE-210ENST00000560912 UQCRFS1P1P0C7P4 283 aa23.42■■□□□ 1.34
CRNDE-210ENST00000560912 MNX1P50219 401 aaPredicted RBP23.42■■□□□ 1.34
CRNDE-210ENST00000560912 TRIM32Q13049 653 aa23.42■■□□□ 1.34
CRNDE-210ENST00000560912 DHX36Q9H2U1 1008 aaKnown RBP23.42■■□□□ 1.34
CRNDE-210ENST00000560912 PI4KBQ9UBF8 816 aa23.42■■□□□ 1.34
CRNDE-210ENST00000560912 TRIM27P14373 513 aa23.41■■□□□ 1.34
CRNDE-210ENST00000560912 MTMR2Q13614 643 aa23.41■■□□□ 1.34
CRNDE-210ENST00000560912 METTL16Q86W50 562 aaKnown RBP23.41■■□□□ 1.34
CRNDE-210ENST00000560912 TRIB2Q92519 343 aa23.41■■□□□ 1.34
CRNDE-210ENST00000560912 LRP2BPQ9P2M1 347 aa23.41■■□□□ 1.34
CRNDE-210ENST00000560912 STAP2Q9UGK3 403 aa23.41■■□□□ 1.34
CRNDE-210ENST00000560912 GNAI2P04899 355 aa23.4■■□□□ 1.34
CRNDE-210ENST00000560912 ASNSP08243 561 aa23.4■■□□□ 1.34
CRNDE-210ENST00000560912 HOXA7P31268 230 aaPredicted RBP23.4■■□□□ 1.34
CRNDE-210ENST00000560912 BACE1P56817 501 aa23.4■■□□□ 1.34
CRNDE-210ENST00000560912 JAG1P78504 1218 aa23.4■■□□□ 1.34
CRNDE-210ENST00000560912 GDF15Q99988 308 aa23.4■■□□□ 1.34
CRNDE-210ENST00000560912 HMX1Q9NP08 348 aaPredicted RBP23.4■■□□□ 1.34
CRNDE-210ENST00000560912 FLT1P17948 1338 aa23.39■■□□□ 1.34
CRNDE-210ENST00000560912 MAP3K21Q5TCX8 1036 aa23.39■■□□□ 1.33
CRNDE-210ENST00000560912 LRCH3Q96II8 777 aa23.39■■□□□ 1.33
CRNDE-210ENST00000560912 NOL10Q9BSC4 688 aaKnown RBP23.39■■□□□ 1.33
CRNDE-210ENST00000560912 AATFQ9NY61 560 aaKnown RBP eCLIP23.39■■□□□ 1.33
CRNDE-210ENST00000560912 TNNQ9UQP3 1299 aa23.39■■□□□ 1.33
CRNDE-210ENST00000560912 PLCG2P16885 1265 aa23.38■■□□□ 1.33
CRNDE-210ENST00000560912 BMP8BP34820 402 aa23.38■■□□□ 1.33
CRNDE-210ENST00000560912 PPP4CP60510 307 aa23.38■■□□□ 1.33
CRNDE-210ENST00000560912 IRX3P78415 501 aaPredicted RBP23.38■■□□□ 1.33
CRNDE-210ENST00000560912 G3BP1Q13283 466 aaKnown RBP eCLIP23.38■■□□□ 1.33
CRNDE-210ENST00000560912 NAA16Q6N069 864 aaPredicted RBP23.38■■□□□ 1.33
CRNDE-210ENST00000560912 ADGRA1Q86SQ6 560 aa23.38■■□□□ 1.33
CRNDE-210ENST00000560912 TXNRD2Q9NNW7 524 aa23.38■■□□□ 1.33
CRNDE-210ENST00000560912 OGDHLQ9ULD0 1010 aa23.38■■□□□ 1.33
CRNDE-210ENST00000560912 BAG3O95817 575 aa23.37■■□□□ 1.33
CRNDE-210ENST00000560912 SHROOM1Q2M3G4 852 aaPredicted RBP23.37■■□□□ 1.33
CRNDE-210ENST00000560912 ATF7IPQ6VMQ6 1270 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms