RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 DHX32Q7L7V1 743 aaKnown RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 MAPKAPK5Q8IW41 473 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 HSCBQ8IWL3 235 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 OGFOD1Q8N543 542 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 NCOA7Q8NI08 942 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 STAG1Q8WVM7 1258 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 PRMT6Q96LA8 375 aaPredicted RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 INCENPQ9NQS7 918 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 MCM9Q9NXL9 1143 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 ARPP21Q9UBL0 812 aaPredicted RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 HDAC9Q9UKV0 1011 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 ECM29Q5VYK3 1845 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 MYH1P12882 1939 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 NAV1Q8NEY1 1877 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 ZNF541Q9H0D2 1346 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 MCM2P49736 904 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 MMP14P50281 582 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 AK2P54819 239 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 ZNF280AP59817 542 aaPredicted RBP8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 TRDNQ13061 729 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 DLGAP5Q15398 846 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 MFSD6Q6ZSS7 791 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 MB21D2Q8IYB1 491 aaPredicted RBP8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 MTMR14Q8NCE2 650 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 DPF2Q92785 391 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 ZBED3Q96IU2 234 aaPredicted RBP8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 TCEANC2Q96MN5 208 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 RNF41Q9H4P4 317 aaPredicted RBP8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 DDX4Q9NQI0 724 aaKnown RBP8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 SAP30BPQ9UHR5 308 aaKnown RBP8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 GJA3Q9Y6H8 435 aa8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 DDX60LQ5H9U9 1706 aaKnown RBP8.57□□□□□ -1.04
HMBOX1-214ENST00000560357 FLT1P17948 1338 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 NEDD4P46934 1319 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 LAMB1P07942 1786 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 SHTN1A0MZ66 631 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 B4E1Z4 1266 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 ORC4O43929 436 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 POLR3DP05423 398 aaPredicted RBP8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 PCP11498 1178 aaKnown RBP8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 MCM5P33992 734 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 GMPSP49915 693 aaPredicted RBP8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 PLCD1P51178 756 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 ANTXR2P58335 489 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 NFIAQ12857 509 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 PICALMQ13492 652 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 TOB2Q14106 344 aaPredicted RBP8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 GPR162Q16538 588 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 CYB5R4Q7L1T6 521 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 RALYLQ86SE5 291 aaKnown RBP8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 STK11IPQ8N1F8 1099 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 FBXL16Q8N461 479 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 TMX3Q96JJ7 454 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 IDI2Q9BXS1 227 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 AGXT2Q9BYV1 514 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 KRT23Q9C075 422 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 OSBPL5Q9H0X9 879 aaPredicted RBP8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 TDRD3Q9H7E2 651 aaKnown RBP8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 CNNM2Q9H8M5 875 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 RNF181Q9P0P0 153 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 ZSWIM5Q9P217 1185 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 DAXXQ9UER7 740 aaPredicted RBP8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 FAM198AQ9UFP1 575 aa8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMBOX1-214ENST00000560357 WDR19Q8NEZ3 1342 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 PRC1O43663 620 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 GRIN3BO60391 1043 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 KDM4AO75164 1064 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 SLC3A2P08195 630 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 CACNB3P54284 484 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 ANKRD1Q15327 319 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 SLC4A8Q2Y0W8 1093 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 C9orf131Q5VYM1 1079 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 Q6ZUG5 572 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 NOL8Q76FK4 1167 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 CHST3Q7LGC8 479 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 ZFPM1Q8IX07 1006 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 AMOTL1Q8IY63 956 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 GPC2Q8N158 579 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 LARP6Q9BRS8 491 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 LRRC2Q9BYS8 371 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 OCEL1Q9H607 264 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 MYOZ2Q9NPC6 264 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 ZNF70Q9UC06 446 aaPredicted RBP8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 CNOT7Q9UIV1 285 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 LIMCH1Q9UPQ0 1083 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 ROBO3Q96MS0 1386 aa8.55□□□□□ -1.04
HMBOX1-214ENST00000560357 WNT10BO00744 389 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 ENTPD3O75355 529 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 GABPAQ06546 454 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 CUL4AQ13619 759 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 RRP12Q5JTH9 1297 aaKnown RBP8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 FKBP1CQ5VVH2 108 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 SH3BP5LQ7L8J4 393 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 TTC6Q86TZ1 520 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 IGDCC4Q8TDY8 1250 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 ESR2Q92731 530 aa8.54□□□□□ -1.04
HMBOX1-214ENST00000560357 BRF1Q92994 677 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms