RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 COA7Q96BR5 231 aa13.76□□□□□ -0.21
LINC02253-202ENST00000560314 NSUN4Q96CB9 384 aaKnown RBP13.76□□□□□ -0.21
LINC02253-202ENST00000560314 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC02253-202ENST00000560314 HMG20BQ9P0W2 317 aa13.76□□□□□ -0.21
LINC02253-202ENST00000560314 HERC5Q9UII4 1024 aaKnown RBP13.76□□□□□ -0.21
LINC02253-202ENST00000560314 GABRQQ9UN88 632 aa13.76□□□□□ -0.21
LINC02253-202ENST00000560314 NR2E3Q9Y5X4 410 aa13.76□□□□□ -0.21
LINC02253-202ENST00000560314 RANBP2P49792 3224 aaKnown RBP13.76□□□□□ -0.21
LINC02253-202ENST00000560314 IPO8O15397 1037 aaKnown RBP13.75□□□□□ -0.21
LINC02253-202ENST00000560314 IGSF3O75054 1194 aa13.75□□□□□ -0.21
LINC02253-202ENST00000560314 UQCRFS1P1P0C7P4 283 aa13.75□□□□□ -0.21
LINC02253-202ENST00000560314 GCLCP48506 637 aaPredicted RBP13.75□□□□□ -0.21
LINC02253-202ENST00000560314 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
LINC02253-202ENST00000560314 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
LINC02253-202ENST00000560314 ZNF384Q8TF68 577 aa13.75□□□□□ -0.21
LINC02253-202ENST00000560314 NEUROD6Q96NK8 337 aa13.75□□□□□ -0.21
LINC02253-202ENST00000560314 UNC93B1Q9H1C4 597 aa13.75□□□□□ -0.21
LINC02253-202ENST00000560314 CDK5RAP2Q96SN8 1893 aa13.75□□□□□ -0.21
LINC02253-202ENST00000560314 SIPA1L1O43166 1804 aa13.74□□□□□ -0.21
LINC02253-202ENST00000560314 GNAI2P04899 355 aa13.74□□□□□ -0.21
LINC02253-202ENST00000560314 ANKRD13CQ8N6S4 541 aa13.74□□□□□ -0.21
LINC02253-202ENST00000560314 ZNF280CQ8ND82 737 aa13.74□□□□□ -0.21
LINC02253-202ENST00000560314 NOL10Q9BSC4 688 aaKnown RBP13.74□□□□□ -0.21
LINC02253-202ENST00000560314 DHX36Q9H2U1 1008 aaKnown RBP13.74□□□□□ -0.21
LINC02253-202ENST00000560314 PAK6Q9NQU5 681 aaPredicted RBP13.74□□□□□ -0.21
LINC02253-202ENST00000560314 ALPK3Q96L96 1907 aa13.73□□□□□ -0.21
LINC02253-202ENST00000560314 A0A1W2PPC1 479 aa13.73□□□□□ -0.21
LINC02253-202ENST00000560314 ELNP15502 786 aa13.73□□□□□ -0.21
LINC02253-202ENST00000560314 PLCG2P16885 1265 aa13.73□□□□□ -0.21
LINC02253-202ENST00000560314 CAP2P40123 477 aa13.73□□□□□ -0.21
LINC02253-202ENST00000560314 TREML2Q5T2D2 321 aa13.73□□□□□ -0.21
LINC02253-202ENST00000560314 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
LINC02253-202ENST00000560314 AS3MTQ9HBK9 375 aa13.73□□□□□ -0.21
LINC02253-202ENST00000560314 RAI14Q9P0K7 980 aa13.73□□□□□ -0.21
LINC02253-202ENST00000560314 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
LINC02253-202ENST00000560314 USP17L5A8MUK1 530 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 HMGCRP04035 888 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 SLURP2P0DP57 97 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 TRIM27P14373 513 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 MCAMP43121 646 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 SPP2Q13103 211 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC02253-202ENST00000560314 SH3D19Q5HYK7 790 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 PI16Q6UXB8 463 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 CCDC84Q86UT8 332 aaPredicted RBP13.72□□□□□ -0.21
LINC02253-202ENST00000560314 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 CRISPLD2Q9H0B8 497 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 PRO3102Q9H379 93 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 GINM1Q9NU53 330 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 LRP2BPQ9P2M1 347 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.72□□□□□ -0.21
LINC02253-202ENST00000560314 PI4KBQ9UBF8 816 aa13.72□□□□□ -0.21
LINC02253-202ENST00000560314 FAM196BA6NMK8 535 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 CCER2I3L3R5 266 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 ZBTB7BO15156 539 aaPredicted RBP13.71□□□□□ -0.21
LINC02253-202ENST00000560314 BAG3O95817 575 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 ASNSP08243 561 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 HMGCS2P54868 508 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 TBC1D9Q6ZT07 1266 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 ANKLE1Q8NAG6 615 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 DEFB118Q96PH6 123 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 GPR108Q9NPR9 543 aa13.71□□□□□ -0.21
LINC02253-202ENST00000560314 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.71□□□□□ -0.21
LINC02253-202ENST00000560314 MYO5AQ9Y4I1 1855 aaKnown RBP13.7□□□□□ -0.22
LINC02253-202ENST00000560314 PLXNB2O15031 1838 aa13.7□□□□□ -0.22
LINC02253-202ENST00000560314 EVI5O60447 810 aa13.7□□□□□ -0.22
LINC02253-202ENST00000560314 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
LINC02253-202ENST00000560314 WDR18Q9BV38 432 aa13.7□□□□□ -0.22
LINC02253-202ENST00000560314 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC02253-202ENST00000560314 ASCC2Q9H1I8 757 aaPredicted RBP13.7□□□□□ -0.22
LINC02253-202ENST00000560314 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
LINC02253-202ENST00000560314 SZT2Q5T011 3432 aa13.7□□□□□ -0.22
LINC02253-202ENST00000560314 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
LINC02253-202ENST00000560314 BACE1P56817 501 aa13.69□□□□□ -0.22
LINC02253-202ENST00000560314 PPP4CP60510 307 aa13.69□□□□□ -0.22
LINC02253-202ENST00000560314 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
LINC02253-202ENST00000560314 CCDC158Q5M9N0 1113 aa13.69□□□□□ -0.22
LINC02253-202ENST00000560314 NAA16Q6N069 864 aaPredicted RBP13.69□□□□□ -0.22
LINC02253-202ENST00000560314 METTL16Q86W50 562 aaKnown RBP13.69□□□□□ -0.22
LINC02253-202ENST00000560314 SH3RF3Q8TEJ3 882 aaPredicted RBP13.69□□□□□ -0.22
LINC02253-202ENST00000560314 GTF3C2Q8WUA4 911 aaPredicted RBP13.69□□□□□ -0.22
LINC02253-202ENST00000560314 ZNF512BQ96KM6 892 aaPredicted RBP13.69□□□□□ -0.22
LINC02253-202ENST00000560314 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC02253-202ENST00000560314 TMOD4Q9NZQ9 345 aa13.69□□□□□ -0.22
LINC02253-202ENST00000560314 MORF4L1Q9UBU8 362 aa13.69□□□□□ -0.22
LINC02253-202ENST00000560314 MYH1P12882 1939 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 FLT1P17948 1338 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 RPTORQ8N122 1335 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 DDX60LQ5H9U9 1706 aaKnown RBP13.68□□□□□ -0.22
LINC02253-202ENST00000560314 C19orf81C9J6K1 198 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 HOXA7P31268 230 aaPredicted RBP13.68□□□□□ -0.22
LINC02253-202ENST00000560314 MTMR2Q13614 643 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 TNNI3KQ59H18 835 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 TTC39AQ5SRH9 613 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 NECAB2Q7Z6G3 386 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 CERS3Q8IU89 383 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 SOCS4Q8WXH5 440 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 FPGT-TNNI3KV9GXZ4 949 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms