RNA–Protein interactions for RNA: ENST00000559243.1

CCDC33-207, Transcript of coiled-coil domain containing 33, humanhuman

TSL 4

Gene CCDC33, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-207ENST00000559243 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
CCDC33-207ENST00000559243 SSH3Q8TE77 659 aa13.14□□□□□ -0.31
CCDC33-207ENST00000559243 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
CCDC33-207ENST00000559243 SNRKQ9NRH2 765 aa13.14□□□□□ -0.31
CCDC33-207ENST00000559243 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
CCDC33-207ENST00000559243 COL2A1P02458 1487 aaPredicted RBP13.14□□□□□ -0.31
CCDC33-207ENST00000559243 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
CCDC33-207ENST00000559243 BAG3O95817 575 aa13.13□□□□□ -0.31
CCDC33-207ENST00000559243 UBXN2AP68543 259 aa13.13□□□□□ -0.31
CCDC33-207ENST00000559243 NAA16Q6N069 864 aaPredicted RBP13.13□□□□□ -0.31
CCDC33-207ENST00000559243 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
CCDC33-207ENST00000559243 NKX2-3Q8TAU0 364 aa13.13□□□□□ -0.31
CCDC33-207ENST00000559243 SH3RF3Q8TEJ3 882 aaPredicted RBP13.13□□□□□ -0.31
CCDC33-207ENST00000559243 DBNDD2Q9BQY9 259 aa13.13□□□□□ -0.31
CCDC33-207ENST00000559243 AGTPBP1Q9UPW5 1226 aa13.13□□□□□ -0.31
CCDC33-207ENST00000559243 CCL5P13501 91 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 CAP2P40123 477 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 HNRNPUQ00839 825 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC33-207ENST00000559243 SPP2Q13103 211 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 TREML2Q5T2D2 321 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 PROCA1Q8NCQ7 364 aaPredicted RBP13.12□□□□□ -0.31
CCDC33-207ENST00000559243 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 SHISA4Q96DD7 197 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 RNF208Q9H0X6 261 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 C1orf115Q9H7X2 142 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC33-207ENST00000559243 HERC5Q9UII4 1024 aaKnown RBP13.12□□□□□ -0.31
CCDC33-207ENST00000559243 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
CCDC33-207ENST00000559243 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 TNPO2O14787 897 aaKnown RBP13.11□□□□□ -0.31
CCDC33-207ENST00000559243 ADCY3O60266 1144 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 GJB1P08034 283 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 PLCG2P16885 1265 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 FLT3LGP49771 235 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 RRP1BQ14684 758 aaKnown RBP13.11□□□□□ -0.31
CCDC33-207ENST00000559243 ITPRIPQ8IWB1 547 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 ANKRD13CQ8N6S4 541 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 ZNF512BQ96KM6 892 aaPredicted RBP13.11□□□□□ -0.31
CCDC33-207ENST00000559243 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
CCDC33-207ENST00000559243 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 DOCK3Q8IZD9 2030 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 ATAD5Q96QE3 1844 aa13.11□□□□□ -0.31
CCDC33-207ENST00000559243 CYP2E1P05181 493 aaPredicted RBP13.1□□□□□ -0.31
CCDC33-207ENST00000559243 ZAP70P43403 619 aa13.1□□□□□ -0.31
CCDC33-207ENST00000559243 GJA8P48165 433 aa13.1□□□□□ -0.31
CCDC33-207ENST00000559243 HMGCS2P54868 508 aa13.1□□□□□ -0.31
CCDC33-207ENST00000559243 PPP4CP60510 307 aa13.1□□□□□ -0.31
CCDC33-207ENST00000559243 PABPC4Q13310 644 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC33-207ENST00000559243 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
CCDC33-207ENST00000559243 TGFBRAP1Q8WUH2 860 aa13.1□□□□□ -0.31
CCDC33-207ENST00000559243 AS3MTQ9HBK9 375 aa13.1□□□□□ -0.31
CCDC33-207ENST00000559243 NOP58Q9Y2X3 529 aaKnown RBP13.1□□□□□ -0.31
CCDC33-207ENST00000559243 ZBTB7BO15156 539 aaPredicted RBP13.09□□□□□ -0.31
CCDC33-207ENST00000559243 IGSF3O75054 1194 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 IRF5Q13568 498 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 FAM110CQ1W6H9 321 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 ADGRA1Q86SQ6 560 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 FOXP4Q8IVH2 680 aaPredicted RBP13.09□□□□□ -0.31
CCDC33-207ENST00000559243 SLC17A8Q8NDX2 589 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 PXYLP1Q8TE99 480 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 DPF3Q92784 378 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 COA7Q96BR5 231 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 CCDC8Q9H0W5 538 aaPredicted RBP13.09□□□□□ -0.31
CCDC33-207ENST00000559243 UNC93B1Q9H1C4 597 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
CCDC33-207ENST00000559243 MYO5AQ9Y4I1 1855 aaKnown RBP13.09□□□□□ -0.31
CCDC33-207ENST00000559243 MAST2Q6P0Q8 1798 aa13.09□□□□□ -0.31
CCDC33-207ENST00000559243 LOC285556D6RIA3 1793 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 H0YGN5 161 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 ASNSP08243 561 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 RLBP1P12271 317 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 ELNP15502 786 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 GCLCP48506 637 aaPredicted RBP13.08□□□□□ -0.32
CCDC33-207ENST00000559243 SH3D19Q5HYK7 790 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 MIER1Q8N108 512 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.32
CCDC33-207ENST00000559243 U2AF1L4Q8WU68 220 aaKnown RBP13.08□□□□□ -0.32
CCDC33-207ENST00000559243 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
CCDC33-207ENST00000559243 PIH1D3Q9NQM4 214 aaKnown RBP13.08□□□□□ -0.32
CCDC33-207ENST00000559243 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
CCDC33-207ENST00000559243 TAOK2Q9UL54 1235 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 PALD1Q9ULE6 856 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 COLQQ9Y215 455 aaPredicted RBP13.08□□□□□ -0.32
CCDC33-207ENST00000559243 FLT1P17948 1338 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 CDK5RAP2Q96SN8 1893 aa13.08□□□□□ -0.32
CCDC33-207ENST00000559243 RANBP2P49792 3224 aaKnown RBP13.07□□□□□ -0.32
CCDC33-207ENST00000559243 SIPA1L1O43166 1804 aa13.07□□□□□ -0.32
CCDC33-207ENST00000559243 SGPL1O95470 568 aa13.07□□□□□ -0.32
CCDC33-207ENST00000559243 INHAP05111 366 aa13.07□□□□□ -0.32
CCDC33-207ENST00000559243 CYP7A1P22680 504 aa13.07□□□□□ -0.32
CCDC33-207ENST00000559243 MTMR2Q13614 643 aa13.07□□□□□ -0.32
CCDC33-207ENST00000559243 EAF2Q96CJ1 260 aaPredicted RBP13.07□□□□□ -0.32
CCDC33-207ENST00000559243 HTATIP2Q9BUP3 242 aa13.07□□□□□ -0.32
CCDC33-207ENST00000559243 WDR18Q9BV38 432 aa13.07□□□□□ -0.32
CCDC33-207ENST00000559243 FOCADQ5VW36 1801 aa13.06□□□□□ -0.32
CCDC33-207ENST00000559243 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms