RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 CCDC73Q6ZRK6 1079 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 IGDCC4Q8TDY8 1250 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 TNMDQ9H2S6 317 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 FAM13BQ9NYF5 915 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 C4BP0C0L5 1744 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 TCHHQ07283 1943 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 CACNB3P54284 484 aa12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 GSTO1P78417 241 aa12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 NUP62CLQ9H1M0 184 aa12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 ZMYM6O95789 1325 aa12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 RESTQ13127 1097 aa12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 ZRSR1Q15695 479 aaKnown RBP12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 ZSCAN16Q9H4T2 348 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 KRT40Q6A162 431 aa12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 TDRD7Q8NHU6 1098 aaKnown RBP12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 CTCFLQ8NI51 663 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 SMARCC2Q8TAQ2 1214 aa12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 STAG1Q8WVM7 1258 aa12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 ZSCAN10Q96SZ4 725 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P5-201ENST00000558731 SRGNP10124 158 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 NPR1P16066 1061 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 ALX1Q15699 326 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 TICAM2Q86XR7 235 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 VAT1LQ9HCJ6 419 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 KCNQ5Q9NR82 932 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 USP17L3A6NCW0 530 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 USP17L4A6NCW7 530 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 PLSCR1O15162 318 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 C21orf2O43822 256 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 GUCY1A2P33402 732 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 USP17L1Q7RTZ2 530 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 FLAD1Q8NFF5 587 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 V9GY48 417 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 UTRNP46939 3433 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 CCAR1Q8IX12 1150 aaKnown RBP12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 ENAHQ8N8S7 591 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 FSIP1Q8NA03 581 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 SDF4Q9BRK5 362 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
CSPG4P5-201ENST00000558731 A0A087WWV3 80 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 ZBTB7AO95365 584 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 HOMER1Q86YM7 354 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 FANCBQ8NB91 859 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 FBXO18Q8NFZ0 1043 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 KAT14Q9H8E8 782 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 VPS54Q9P1Q0 977 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 THSD7AQ9UPZ6 1657 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 SLC15A2Q16348 729 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 AGXT2Q9BYV1 514 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 DDX60Q8IY21 1712 aaKnown RBP12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 A0A1B0GVL5 298 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 BAG6P46379 1132 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 CLIC4Q9Y696 253 aa12.53□□□□□ -0.4
CSPG4P5-201ENST00000558731 CCDC196A0A1B0GTZ2 297 aa12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 KINO60870 393 aaKnown RBP12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 NR1I2O75469 434 aa12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 PLEKHA8P1O95397 391 aa12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 PLCD1P51178 756 aa12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 CRAMP1Q96RY5 1269 aa12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 ATP8A2Q9NTI2 1148 aa12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 ATP6V0A2Q9Y487 856 aa12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 NHSQ6T4R5 1651 aa12.52□□□□□ -0.4
CSPG4P5-201ENST00000558731 SLURP2P0DP57 97 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 CPVLQ9H3G5 476 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 PODXL2Q9NZ53 605 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 BTBD18B2RXH4 712 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 KIF28PB7ZC32 967 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 AOC3Q16853 763 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 ISM2Q6H9L7 571 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 TRIM34Q9BYJ4 488 aa12.52□□□□□ -0.41
CSPG4P5-201ENST00000558731 A0A0U1RQG5 324 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 FAM196BA6NMK8 535 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 SP8Q8IXZ3 490 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 MAP3K11Q16584 847 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 SASS6Q6UVJ0 657 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 PGBD1Q96JS3 809 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 USP40Q9NVE5 1235 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 RGL2O15211 777 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 LIFRP42702 1097 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 NR5A1Q13285 461 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 CLEC10AQ8IUN9 316 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 USP25Q9UHP3 1055 aa12.51□□□□□ -0.41
CSPG4P5-201ENST00000558731 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
CSPG4P5-201ENST00000558731 PDIA4P13667 645 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms