RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 TDRD3Q9H7E2 651 aaKnown RBP10.95□□□□□ -0.66
CHD8-214ENST00000557727 RAI14Q9P0K7 980 aa10.95□□□□□ -0.66
CHD8-214ENST00000557727 LRP2BPQ9P2M1 347 aa10.95□□□□□ -0.66
CHD8-214ENST00000557727 ZNF70Q9UC06 446 aaPredicted RBP10.95□□□□□ -0.66
CHD8-214ENST00000557727 CLRN2A0PK11 232 aa10.94□□□□□ -0.66
CHD8-214ENST00000557727 ADM5C9JUS6 153 aa10.94□□□□□ -0.66
CHD8-214ENST00000557727 ERC2O15083 957 aa10.94□□□□□ -0.66
CHD8-214ENST00000557727 WDHD1O75717 1129 aaPredicted RBP10.94□□□□□ -0.66
CHD8-214ENST00000557727 IDH1O75874 414 aaKnown RBP10.94□□□□□ -0.66
CHD8-214ENST00000557727 ADD2P35612 726 aa10.94□□□□□ -0.66
CHD8-214ENST00000557727 PPP4CP60510 307 aa10.94□□□□□ -0.66
CHD8-214ENST00000557727 NFIAQ12857 509 aa10.94□□□□□ -0.66
CHD8-214ENST00000557727 TTF1Q15361 905 aaPredicted RBP10.94□□□□□ -0.66
CHD8-214ENST00000557727 MAGEB6Q8N7X4 407 aa10.94□□□□□ -0.66
CHD8-214ENST00000557727 RIOK1Q9BRS2 568 aaKnown RBP10.94□□□□□ -0.66
CHD8-214ENST00000557727 GLIS2Q9BZE0 524 aaPredicted RBP10.94□□□□□ -0.66
CHD8-214ENST00000557727 LAMB1P07942 1786 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 ZNF532Q9HCE3 1301 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 TRAF5O00463 557 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 BTDP43251 543 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 CACNB3P54284 484 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 MAP3K12Q12852 859 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 TTC22Q5TAA0 569 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 SLC9C2Q5TAH2 1124 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 NAA16Q6N069 864 aaPredicted RBP10.93□□□□□ -0.66
CHD8-214ENST00000557727 TMED8Q6PL24 325 aaPredicted RBP10.93□□□□□ -0.66
CHD8-214ENST00000557727 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 SMC1BQ8NDV3 1235 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 TEPSINQ96N21 525 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 DDX4Q9NQI0 724 aaKnown RBP10.93□□□□□ -0.66
CHD8-214ENST00000557727 FAM198AQ9UFP1 575 aa10.93□□□□□ -0.66
CHD8-214ENST00000557727 ATRNL1Q5VV63 1379 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 COL9A1P20849 921 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 CYP7A1P22680 504 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 RBM5P52756 815 aaKnown RBP eCLIP10.92□□□□□ -0.66
CHD8-214ENST00000557727 DYNLL1P63167 89 aaKnown RBP10.92□□□□□ -0.66
CHD8-214ENST00000557727 GSTO1P78417 241 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 FSTL1Q12841 308 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 UBE3CQ15386 1083 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 FKBP1CQ5VVH2 108 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 ZFPM1Q8IX07 1006 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 SH3RF3Q8TEJ3 882 aaPredicted RBP10.92□□□□□ -0.66
CHD8-214ENST00000557727 EPAS1Q99814 870 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 IDI2Q9BXS1 227 aa10.92□□□□□ -0.66
CHD8-214ENST00000557727 RPAP1Q9BWH6 1393 aaPredicted RBP10.91□□□□□ -0.66
CHD8-214ENST00000557727 LDHCP07864 332 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 CST9Q5W186 159 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 CDC37L1Q7L3B6 337 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 SH3BP5LQ7L8J4 393 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 KRT26Q7Z3Y9 468 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 USP48Q86UV5 1035 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 LAPTM4BQ86VI4 370 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 APOBEC3FQ8IUX4 373 aaKnown RBP10.91□□□□□ -0.66
CHD8-214ENST00000557727 SLF2Q8IX21 1173 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 MIGA1Q8NAN2 632 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 OSBP2Q969R2 916 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 EVI5LQ96CN4 794 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 PUS7LQ9H0K6 701 aaKnown RBP10.91□□□□□ -0.66
CHD8-214ENST00000557727 USP40Q9NVE5 1235 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 AATFQ9NY61 560 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHD8-214ENST00000557727 MKRN1Q9UHC7 482 aaKnown RBP10.91□□□□□ -0.66
CHD8-214ENST00000557727 COL2A1P02458 1487 aaPredicted RBP10.91□□□□□ -0.66
CHD8-214ENST00000557727 MYH8P13535 1937 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 ATAD5Q96QE3 1844 aa10.91□□□□□ -0.66
CHD8-214ENST00000557727 FOXP2O15409 715 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 RNF113AO15541 343 aaKnown RBP10.9□□□□□ -0.66
CHD8-214ENST00000557727 SDSP20132 328 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 RASA3Q14644 834 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 PROX2Q3B8N5 592 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 ZMYM1Q5SVZ6 1142 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 PRAMEF18Q5VWM3 479 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 FAM83AQ86UY5 434 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 LCORLQ8N3X6 602 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 DCPSQ96C86 337 aaKnown RBP10.9□□□□□ -0.66
CHD8-214ENST00000557727 CDCA5Q96FF9 252 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 TMEM39BQ9GZU3 492 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 DEFB129Q9H1M3 183 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 LAMA4Q16363 1823 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 PHIPQ8WWQ0 1821 aa10.9□□□□□ -0.66
CHD8-214ENST00000557727 TCP10L2B9ZVM9 353 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 M0R2C6 588 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 MYO1BO43795 1136 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 RGS3P49796 1198 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 C1QTNF8P60827 252 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 TICAM2Q86XR7 235 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 SULF1Q8IWU6 871 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 ANKK1Q8NFD2 765 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 APPBP2Q92624 585 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 SEC62Q99442 399 aaKnown RBP10.89□□□□□ -0.67
CHD8-214ENST00000557727 FSD1Q9BTV5 496 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHD8-214ENST00000557727 IL25Q9H293 177 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 VEZTQ9HBM0 779 aa10.89□□□□□ -0.67
CHD8-214ENST00000557727 FLT1P17948 1338 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 A0A0D9SFI3 127 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 ENTPD3O75355 529 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 MBD4O95243 580 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 ZFYP08048 801 aaPredicted RBP10.88□□□□□ -0.67
CHD8-214ENST00000557727 SLURP2P0DP57 97 aa10.88□□□□□ -0.67
CHD8-214ENST00000557727 DOCK1Q14185 1865 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms