RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 CXCL9Q07325 125 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 APOBEC3HQ6NTF7 200 aaKnown RBP12.1□□□□□ -0.47
GABRB3-212ENST00000557641 MB21D2Q8IYB1 491 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-212ENST00000557641 MTMR14Q8NCE2 650 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 TGFBRAP1Q8WUH2 860 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 INTS4Q96HW7 963 aaKnown RBP12.1□□□□□ -0.47
GABRB3-212ENST00000557641 MXD3Q9BW11 206 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 AGXT2Q9BYV1 514 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 USP40Q9NVE5 1235 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 MCM9Q9NXL9 1143 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 METRNQ9UJH8 293 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 FER1L6Q2WGJ9 1857 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 ARFGEF1Q9Y6D6 1849 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 MINDY4BA8MYZ0 360 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 ORC4O43929 436 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 USP17L8P0C7I0 530 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 LMNB1P20700 586 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 RBM5P52756 815 aaKnown RBP eCLIP12.09□□□□□ -0.47
GABRB3-212ENST00000557641 PDE4BQ07343 736 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 CUL4AQ13619 759 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 C12orf60Q5U649 245 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 CDC42EP5Q6NZY7 148 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 ARHGAP27Q6ZUM4 889 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 TTC6Q86TZ1 520 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 TBC1D10CQ8IV04 446 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 ESR2Q92731 530 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 DPF2Q92785 391 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 TMX3Q96JJ7 454 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 TMEM87BQ96K49 555 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 IDI2Q9BXS1 227 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 NBPF3Q9H094 633 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 CWC22Q9HCG8 908 aaKnown RBP12.09□□□□□ -0.47
GABRB3-212ENST00000557641 CHD4Q14839 1912 aa12.09□□□□□ -0.47
GABRB3-212ENST00000557641 ROBO3Q96MS0 1386 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 PRC1O43663 620 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 POLR3DP05423 398 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-212ENST00000557641 CPA1P15085 419 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 RASSF7Q02833 373 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 CTDSPL2Q05D32 466 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 SART3Q15020 963 aaKnown RBP12.08□□□□□ -0.48
GABRB3-212ENST00000557641 DLGAP5Q15398 846 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 Q6ZUG5 572 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 TMTC2Q8N394 836 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 DHX36Q9H2U1 1008 aaKnown RBP12.08□□□□□ -0.48
GABRB3-212ENST00000557641 FLT1P17948 1338 aa12.08□□□□□ -0.48
GABRB3-212ENST00000557641 COL4A5P29400 1685 aa12.07□□□□□ -0.48
GABRB3-212ENST00000557641 ENTPD3O75355 529 aa12.07□□□□□ -0.48
GABRB3-212ENST00000557641 WDHD1O75717 1129 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-212ENST00000557641 EVCP57679 992 aa12.07□□□□□ -0.48
GABRB3-212ENST00000557641 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-212ENST00000557641 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
GABRB3-212ENST00000557641 FKBP1CQ5VVH2 108 aa12.07□□□□□ -0.48
GABRB3-212ENST00000557641 TIAM2Q8IVF5 1701 aa12.07□□□□□ -0.48
GABRB3-212ENST00000557641 MAPKAPK5Q8IW41 473 aa12.07□□□□□ -0.48
GABRB3-212ENST00000557641 ZNF274Q96GC6 653 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-212ENST00000557641 TMOD2Q9NZR1 351 aa12.07□□□□□ -0.48
GABRB3-212ENST00000557641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.07□□□□□ -0.48
GABRB3-212ENST00000557641 ERICH2A1L162 156 aa12.06□□□□□ -0.48
GABRB3-212ENST00000557641 B4E1Z4 1266 aa12.06□□□□□ -0.48
GABRB3-212ENST00000557641 SOCS7O14512 581 aa12.06□□□□□ -0.48
GABRB3-212ENST00000557641 MYO1BO43795 1136 aa12.06□□□□□ -0.48
GABRB3-212ENST00000557641 HLA-DOAP06340 250 aa12.06□□□□□ -0.48
GABRB3-212ENST00000557641 LIFRP42702 1097 aa12.06□□□□□ -0.48
GABRB3-212ENST00000557641 ZNF280AP59817 542 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-212ENST00000557641 BRF1Q92994 677 aa12.06□□□□□ -0.48
GABRB3-212ENST00000557641 OSBPL5Q9H0X9 879 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-212ENST00000557641 TOMM22Q9NS69 142 aa12.06□□□□□ -0.48
GABRB3-212ENST00000557641 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-212ENST00000557641 NEDD4P46934 1319 aa12.06□□□□□ -0.48
GABRB3-212ENST00000557641 MYH2Q9UKX2 1941 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 SCN9AQ15858 1988 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 PSME4Q14997 1843 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 GRIN3BO60391 1043 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 KDM4AO75164 1064 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 PDIA4P13667 645 aaKnown RBP12.05□□□□□ -0.48
GABRB3-212ENST00000557641 ANTXR2P58335 489 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 C16orf86Q6ZW13 317 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 IQCA1Q86XH1 822 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 EHD4Q9H223 541 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 OCEL1Q9H607 264 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 ZSWIM5Q9P217 1185 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 SWAP70Q9UH65 585 aa12.05□□□□□ -0.48
GABRB3-212ENST00000557641 ANGEL1Q9UNK9 670 aaKnown RBP12.05□□□□□ -0.48
GABRB3-212ENST00000557641 LAMA4Q16363 1823 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 COL2A1P02458 1487 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-212ENST00000557641 CYP2D7A0A087X1C5 515 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-212ENST00000557641 IFIT3O14879 490 aaKnown RBP12.04□□□□□ -0.48
GABRB3-212ENST00000557641 PRELPP51888 382 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 RCAN1P53805 252 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 PICALMQ13492 652 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 RRP12Q5JTH9 1297 aaKnown RBP12.04□□□□□ -0.48
GABRB3-212ENST00000557641 NOL8Q76FK4 1167 aaKnown RBP12.04□□□□□ -0.48
GABRB3-212ENST00000557641 CYB5R4Q7L1T6 521 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 SGMS1Q86VZ5 419 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 GPC2Q8N158 579 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 IGDCC4Q8TDY8 1250 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 ZBED3Q96IU2 234 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms