RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 SPP2Q13103 211 aa21.07■□□□□ 0.96
NEDD1-210ENST00000557400 FAM110CQ1W6H9 321 aa21.07■□□□□ 0.96
NEDD1-210ENST00000557400 ANKRD13CQ8N6S4 541 aa21.07■□□□□ 0.96
NEDD1-210ENST00000557400 ZNF280CQ8ND82 737 aa21.07■□□□□ 0.96
NEDD1-210ENST00000557400 COA7Q96BR5 231 aa21.07■□□□□ 0.96
NEDD1-210ENST00000557400 TBC1D2Q9BYX2 928 aa21.07■□□□□ 0.96
NEDD1-210ENST00000557400 G3BP1Q13283 466 aaKnown RBP eCLIP21.06■□□□□ 0.96
NEDD1-210ENST00000557400 NR2E3Q9Y5X4 410 aa21.06■□□□□ 0.96
NEDD1-210ENST00000557400 DOCK1Q14185 1865 aa21.05■□□□□ 0.96
NEDD1-210ENST00000557400 PNMA6EA0A0J9YXQ4 647 aa21.05■□□□□ 0.96
NEDD1-210ENST00000557400 UQCRFS1P1P0C7P4 283 aa21.05■□□□□ 0.96
NEDD1-210ENST00000557400 CAPN2P17655 700 aa21.05■□□□□ 0.96
NEDD1-210ENST00000557400 CAP2P40123 477 aa21.05■□□□□ 0.96
NEDD1-210ENST00000557400 MCAMP43121 646 aa21.05■□□□□ 0.96
NEDD1-210ENST00000557400 ATF7IPQ6VMQ6 1270 aa21.05■□□□□ 0.96
NEDD1-210ENST00000557400 TEX11Q8IYF3 940 aa21.05■□□□□ 0.96
NEDD1-210ENST00000557400 LRP2BPQ9P2M1 347 aa21.05■□□□□ 0.96
NEDD1-210ENST00000557400 GCLCP48506 637 aaPredicted RBP21.04■□□□□ 0.96
NEDD1-210ENST00000557400 PABPC4Q13310 644 aaKnown RBP eCLIP21.04■□□□□ 0.96
NEDD1-210ENST00000557400 RBM27Q9P2N5 1060 aaKnown RBP21.04■□□□□ 0.96
NEDD1-210ENST00000557400 HERC5Q9UII4 1024 aaKnown RBP21.04■□□□□ 0.96
NEDD1-210ENST00000557400 TAOK2Q9UL54 1235 aa21.04■□□□□ 0.96
NEDD1-210ENST00000557400 USP17L5A8MUK1 530 aa21.03■□□□□ 0.96
NEDD1-210ENST00000557400 CCER2I3L3R5 266 aa21.03■□□□□ 0.96
NEDD1-210ENST00000557400 HMGCS2P54868 508 aa21.03■□□□□ 0.96
NEDD1-210ENST00000557400 FRAT1Q92837 279 aaPredicted RBP21.03■□□□□ 0.96
NEDD1-210ENST00000557400 DEFB118Q96PH6 123 aa21.03■□□□□ 0.96
NEDD1-210ENST00000557400 NOL10Q9BSC4 688 aaKnown RBP21.03■□□□□ 0.96
NEDD1-210ENST00000557400 PAK6Q9NQU5 681 aaPredicted RBP21.03■□□□□ 0.96
NEDD1-210ENST00000557400 TNNQ9UQP3 1299 aa21.03■□□□□ 0.96
NEDD1-210ENST00000557400 TFRCP02786 760 aaKnown RBP21.02■□□□□ 0.96
NEDD1-210ENST00000557400 RRP1BQ14684 758 aaKnown RBP21.02■□□□□ 0.96
NEDD1-210ENST00000557400 SH3D19Q5HYK7 790 aa21.02■□□□□ 0.96
NEDD1-210ENST00000557400 SH3RF3Q8TEJ3 882 aaPredicted RBP21.02■□□□□ 0.96
NEDD1-210ENST00000557400 AS3MTQ9HBK9 375 aa21.02■□□□□ 0.96
NEDD1-210ENST00000557400 PI4KBQ9UBF8 816 aa21.02■□□□□ 0.96
NEDD1-210ENST00000557400 BAG3O95817 575 aa21.01■□□□□ 0.95
NEDD1-210ENST00000557400 NAA16Q6N069 864 aaPredicted RBP21.01■□□□□ 0.95
NEDD1-210ENST00000557400 CLUAP1Q96AJ1 413 aa21.01■□□□□ 0.95
NEDD1-210ENST00000557400 ASCC2Q9H1I8 757 aaPredicted RBP21.01■□□□□ 0.95
NEDD1-210ENST00000557400 DHX36Q9H2U1 1008 aaKnown RBP21.01■□□□□ 0.95
NEDD1-210ENST00000557400 PRO3102Q9H379 93 aa21.01■□□□□ 0.95
NEDD1-210ENST00000557400 GPR108Q9NPR9 543 aa21.01■□□□□ 0.95
NEDD1-210ENST00000557400 CEP290O15078 2479 aa21.01■□□□□ 0.95
NEDD1-210ENST00000557400 PHIPQ8WWQ0 1821 aa21■□□□□ 0.95
NEDD1-210ENST00000557400 ZBTB7BO15156 539 aaPredicted RBP21■□□□□ 0.95
NEDD1-210ENST00000557400 BCAR3O75815 825 aa21■□□□□ 0.95
NEDD1-210ENST00000557400 PLCG2P16885 1265 aa21■□□□□ 0.95
NEDD1-210ENST00000557400 CRISPLD2Q9H0B8 497 aa21■□□□□ 0.95
NEDD1-210ENST00000557400 SNRKQ9NRH2 765 aa21■□□□□ 0.95
NEDD1-210ENST00000557400 AATFQ9NY61 560 aaKnown RBP eCLIP21■□□□□ 0.95
NEDD1-210ENST00000557400 PTPRFP10586 1907 aa21■□□□□ 0.95
NEDD1-210ENST00000557400 TRIOBPQ9H2D6 2365 aa20.99■□□□□ 0.95
NEDD1-210ENST00000557400 TNNI3KQ59H18 835 aa20.99■□□□□ 0.95
NEDD1-210ENST00000557400 TTC39AQ5SRH9 613 aa20.99■□□□□ 0.95
NEDD1-210ENST00000557400 WDR18Q9BV38 432 aa20.99■□□□□ 0.95
NEDD1-210ENST00000557400 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.99■□□□□ 0.95
NEDD1-210ENST00000557400 FPGT-TNNI3KV9GXZ4 949 aa20.99■□□□□ 0.95
NEDD1-210ENST00000557400 MGAMO43451 1857 aa20.98■□□□□ 0.95
NEDD1-210ENST00000557400 EVI5O60447 810 aa20.98■□□□□ 0.95
NEDD1-210ENST00000557400 HMGCRP04035 888 aa20.98■□□□□ 0.95
NEDD1-210ENST00000557400 ASNSP08243 561 aa20.98■□□□□ 0.95
NEDD1-210ENST00000557400 PPP4CP60510 307 aa20.98■□□□□ 0.95
NEDD1-210ENST00000557400 MTMR2Q13614 643 aa20.98■□□□□ 0.95
NEDD1-210ENST00000557400 POLA2Q14181 598 aa20.98■□□□□ 0.95
NEDD1-210ENST00000557400 CCDC158Q5M9N0 1113 aa20.98■□□□□ 0.95
NEDD1-210ENST00000557400 BACE1P56817 501 aa20.97■□□□□ 0.95
NEDD1-210ENST00000557400 IRX3P78415 501 aaPredicted RBP20.97■□□□□ 0.95
NEDD1-210ENST00000557400 OS9Q13438 667 aaPredicted RBP20.97■□□□□ 0.95
NEDD1-210ENST00000557400 MAPKAPK5Q8IW41 473 aa20.97■□□□□ 0.95
NEDD1-210ENST00000557400 TMEM57Q8N5G2 664 aa20.97■□□□□ 0.95
NEDD1-210ENST00000557400 TGFBRAP1Q8WUH2 860 aa20.97■□□□□ 0.95
NEDD1-210ENST00000557400 DBNDD2Q9BQY9 259 aa20.97■□□□□ 0.95
NEDD1-210ENST00000557400 MORF4L1Q9UBU8 362 aa20.97■□□□□ 0.95
NEDD1-210ENST00000557400 GJD2Q9UKL4 321 aa20.97■□□□□ 0.95
NEDD1-210ENST00000557400 FLT1P17948 1338 aa20.97■□□□□ 0.95
NEDD1-210ENST00000557400 RANBP2P49792 3224 aaKnown RBP20.96■□□□□ 0.95
NEDD1-210ENST00000557400 LOC285556D6RIA3 1793 aa20.96■□□□□ 0.95
NEDD1-210ENST00000557400 IGSF3O75054 1194 aa20.96■□□□□ 0.95
NEDD1-210ENST00000557400 METTL16Q86W50 562 aaKnown RBP20.96■□□□□ 0.95
NEDD1-210ENST00000557400 FOXP4Q8IVH2 680 aaPredicted RBP20.96■□□□□ 0.95
NEDD1-210ENST00000557400 SSH3Q8TE77 659 aa20.96■□□□□ 0.95
NEDD1-210ENST00000557400 PAWRQ96IZ0 340 aaKnown RBP20.96■□□□□ 0.95
NEDD1-210ENST00000557400 TRIM34Q9BYJ4 488 aa20.96■□□□□ 0.95
NEDD1-210ENST00000557400 DNAJC18Q9H819 358 aa20.96■□□□□ 0.95
NEDD1-210ENST00000557400 TMOD4Q9NZQ9 345 aa20.96■□□□□ 0.95
NEDD1-210ENST00000557400 CYP2E1P05181 493 aaPredicted RBP20.95■□□□□ 0.94
NEDD1-210ENST00000557400 HOXA7P31268 230 aaPredicted RBP20.95■□□□□ 0.94
NEDD1-210ENST00000557400 ZKSCAN2Q63HK3 967 aa20.95■□□□□ 0.94
NEDD1-210ENST00000557400 NECAB2Q7Z6G3 386 aa20.95■□□□□ 0.94
NEDD1-210ENST00000557400 ADGRA1Q86SQ6 560 aa20.95■□□□□ 0.94
NEDD1-210ENST00000557400 CRACR2BQ8N4Y2 399 aaPredicted RBP20.95■□□□□ 0.94
NEDD1-210ENST00000557400 ZNF512BQ96KM6 892 aaPredicted RBP20.95■□□□□ 0.94
NEDD1-210ENST00000557400 GINM1Q9NU53 330 aa20.95■□□□□ 0.94
NEDD1-210ENST00000557400 A0A1W2PPC1 479 aa20.94■□□□□ 0.94
NEDD1-210ENST00000557400 C19orf81C9J6K1 198 aa20.94■□□□□ 0.94
NEDD1-210ENST00000557400 JAG1P78504 1218 aa20.94■□□□□ 0.94
NEDD1-210ENST00000557400 ANKLE1Q8NAG6 615 aa20.94■□□□□ 0.94
NEDD1-210ENST00000557400 HMX1Q9NP08 348 aaPredicted RBP20.94■□□□□ 0.94
NEDD1-210ENST00000557400 PALD1Q9ULE6 856 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms