RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.95■□□□□ 0.3
NEK9-209ENST00000556170 POLR3EQ9NVU0 708 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 NFE2L3Q9Y4A8 694 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 TOM1O60784 492 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 LDHBP07195 334 aaKnown RBP16.95■□□□□ 0.3
NEK9-209ENST00000556170 ATP1A3P13637 1013 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 LRRC8AQ8IWT6 810 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 FANCLQ9NW38 375 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 NFAT5O94916 1531 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 CUTAO60888 179 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
NEK9-209ENST00000556170 CCDC150Q8NCX0 1101 aa16.95■□□□□ 0.3
NEK9-209ENST00000556170 MAGEC2Q9UBF1 373 aaPredicted RBP16.95■□□□□ 0.3
NEK9-209ENST00000556170 SOS2Q07890 1332 aaPredicted RBP16.94■□□□□ 0.3
NEK9-209ENST00000556170 NWD1Q149M9 1564 aa16.94■□□□□ 0.3
NEK9-209ENST00000556170 CDCA7Q9BWT1 371 aaPredicted RBP16.94■□□□□ 0.3
NEK9-209ENST00000556170 OVOS2A0A0G2JMS6 1433 aa16.94■□□□□ 0.3
NEK9-209ENST00000556170 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.94■□□□□ 0.3
NEK9-209ENST00000556170 BCL2L12Q9HB09 334 aa16.94■□□□□ 0.3
NEK9-209ENST00000556170 N4BP3O15049 544 aa16.94■□□□□ 0.3
NEK9-209ENST00000556170 GUCY1A2P33402 732 aa16.94■□□□□ 0.3
NEK9-209ENST00000556170 CELF1Q92879 486 aaKnown RBP16.94■□□□□ 0.3
NEK9-209ENST00000556170 PAXBP1Q9Y5B6 917 aa16.94■□□□□ 0.3
NEK9-209ENST00000556170 EIF6P56537 245 aaKnown RBP16.93■□□□□ 0.3
NEK9-209ENST00000556170 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 GPR101Q96P66 508 aaPredicted RBP16.93■□□□□ 0.3
NEK9-209ENST00000556170 UBN2Q6ZU65 1347 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 A0A1W2PQ27 194 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 A0A1W2PQ64 194 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 A0A1W2PQD8 194 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 GSG1L2A8MUP6 293 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 CCP110O43303 1012 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 TFAP4Q01664 338 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 LONRF3Q496Y0 759 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 SEC63Q9UGP8 760 aaKnown RBP16.93■□□□□ 0.3
NEK9-209ENST00000556170 VGLL3A8MV65 326 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 KARSQ15046 597 aaKnown RBP16.93■□□□□ 0.3
NEK9-209ENST00000556170 ARHGAP29Q52LW3 1261 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 UIMC1Q96RL1 719 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 KCNF1Q9H3M0 494 aa16.93■□□□□ 0.3
NEK9-209ENST00000556170 POSTNQ15063 836 aa16.92■□□□□ 0.3
NEK9-209ENST00000556170 TEX35Q5T0J7 233 aa16.92■□□□□ 0.3
NEK9-209ENST00000556170 SPTY2D1Q68D10 685 aaPredicted RBP16.92■□□□□ 0.3
NEK9-209ENST00000556170 FMR1NBQ8N0W7 255 aaPredicted RBP16.92■□□□□ 0.3
NEK9-209ENST00000556170 EEF2KMTQ96G04 330 aa16.92■□□□□ 0.3
NEK9-209ENST00000556170 ZSCAN10Q96SZ4 725 aaPredicted RBP16.92■□□□□ 0.3
NEK9-209ENST00000556170 BLZF1Q9H2G9 400 aa16.92■□□□□ 0.3
NEK9-209ENST00000556170 ARGLU1Q9NWB6 273 aaPredicted RBP16.92■□□□□ 0.3
NEK9-209ENST00000556170 PCDHB6Q9Y5E3 794 aa16.92■□□□□ 0.3
NEK9-209ENST00000556170 RTL9Q8NET4 1388 aa16.92■□□□□ 0.3
NEK9-209ENST00000556170 CCT6AP40227 531 aaKnown RBP16.92■□□□□ 0.3
NEK9-209ENST00000556170 SLC4A9Q96Q91 983 aa16.92■□□□□ 0.3
NEK9-209ENST00000556170 NUP88Q99567 741 aaPredicted RBP16.92■□□□□ 0.3
NEK9-209ENST00000556170 WDHD1O75717 1129 aaPredicted RBP16.92■□□□□ 0.3
NEK9-209ENST00000556170 CDC25AP30304 524 aa16.92■□□□□ 0.3
NEK9-209ENST00000556170 NAP1L1P55209 391 aaKnown RBP16.92■□□□□ 0.3
NEK9-209ENST00000556170 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
NEK9-209ENST00000556170 CDHR2Q9BYE9 1310 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
NEK9-209ENST00000556170 KANK3Q6NY19 840 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 WTIPA6NIX2 430 aaPredicted RBP16.91■□□□□ 0.3
NEK9-209ENST00000556170 ZSCAN12O43309 604 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 CLSTN1O94985 981 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 IDEP14735 1019 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 STIM1Q13586 685 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 LY9Q9HBG7 655 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 HPS5Q9UPZ3 1129 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 LDHCP07864 332 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 U2AF2P26368 475 aaKnown RBP eCLIP16.91■□□□□ 0.32e-6■□□□□ 10.9
NEK9-209ENST00000556170 CNBD1Q8NA66 436 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 GPKOWQ92917 476 aaPredicted RBP eCLIP16.91■□□□□ 0.3
NEK9-209ENST00000556170 RFX7Q2KHR2 1363 aa16.91■□□□□ 0.3
NEK9-209ENST00000556170 NMT2O60551 498 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 GOLGA8HP0CJ92 632 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 PRDX5P30044 214 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 KRBA2Q6ZNG9 492 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 OXER1Q8TDS5 423 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 MRFAP1L1Q96HT8 127 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 FUCA2Q9BTY2 467 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 CPDO75976 1380 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 CASP1P29466 404 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 STAT6P42226 847 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 ADKP55263 362 aaKnown RBP16.9■□□□□ 0.3
NEK9-209ENST00000556170 ITPK1Q13572 414 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 CCDC96Q2M329 555 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 LZTFL1Q9NQ48 299 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 UFL1O94874 794 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 TANGO6Q9C0B7 1094 aa16.9■□□□□ 0.3
NEK9-209ENST00000556170 FOXN1O15353 648 aa16.89■□□□□ 0.3
NEK9-209ENST00000556170 IFNAR1P17181 557 aa16.89■□□□□ 0.3
NEK9-209ENST00000556170 TTC38Q5R3I4 469 aa16.89■□□□□ 0.3
NEK9-209ENST00000556170 SMYD4Q8IYR2 804 aaPredicted RBP16.89■□□□□ 0.3
NEK9-209ENST00000556170 MARCH10Q8NA82 808 aaPredicted RBP16.89■□□□□ 0.3
NEK9-209ENST00000556170 PLA2G12BQ9BX93 195 aa16.89■□□□□ 0.3
NEK9-209ENST00000556170 ANKRD2Q9GZV1 360 aa16.89■□□□□ 0.3
NEK9-209ENST00000556170 EPB41L4AQ9HCS5 686 aaPredicted RBP16.89■□□□□ 0.3
NEK9-209ENST00000556170 KIF2AO00139 706 aaPredicted RBP16.89■□□□□ 0.29
NEK9-209ENST00000556170 PLEKHA8P1O95397 391 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms