RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 EAF1Q96JC9 268 aaPredicted RBP6.71□□□□□ -1.34
KTN1-222ENST00000555506 SEC16BQ96JE7 1060 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 DNAJC2Q99543 621 aaKnown RBP6.71□□□□□ -1.34
KTN1-222ENST00000555506 NT5C1AQ9BXI3 368 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 SUPT16HQ9Y5B9 1047 aaKnown RBP6.71□□□□□ -1.34
KTN1-222ENST00000555506 ACTL7BQ9Y614 415 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 GREM1O60565 184 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 TFE3P19532 575 aaPredicted RBP6.7□□□□□ -1.34
KTN1-222ENST00000555506 GARTP22102 1010 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 RXRBP28702 533 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 FAM160A1Q05DH4 1040 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 SNAP47Q5SQN1 464 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 RNF43Q68DV7 783 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 DYMQ7RTS9 669 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 PPP1R9AQ9ULJ8 1098 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 AP4E1Q9UPM8 1137 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
KTN1-222ENST00000555506 GSC2O15499 205 aa6.69□□□□□ -1.34
KTN1-222ENST00000555506 USP11P51784 963 aa6.69□□□□□ -1.34
KTN1-222ENST00000555506 RBL2Q08999 1139 aa6.69□□□□□ -1.34
KTN1-222ENST00000555506 DPH6Q7L8W6 267 aa6.69□□□□□ -1.34
KTN1-222ENST00000555506 GOLM1Q8NBJ4 401 aa6.69□□□□□ -1.34
KTN1-222ENST00000555506 KCNB2Q92953 911 aa6.69□□□□□ -1.34
KTN1-222ENST00000555506 HIRIP3Q9BW71 556 aaPredicted RBP6.69□□□□□ -1.34
KTN1-222ENST00000555506 FAM105AQ9NUU6 356 aa6.69□□□□□ -1.34
KTN1-222ENST00000555506 TMPRSS2O15393 492 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 BMP6P22004 513 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 NME2P22392 152 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 ARNTP27540 789 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 COL9A2Q14055 689 aaPredicted RBP6.68□□□□□ -1.34
KTN1-222ENST00000555506 MPRIPQ6WCQ1 1025 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 CCDC84Q86UT8 332 aaPredicted RBP6.68□□□□□ -1.34
KTN1-222ENST00000555506 ZDHHC13Q8IUH4 622 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 EZH1Q92800 747 aaPredicted RBP6.68□□□□□ -1.34
KTN1-222ENST00000555506 GSX1Q9H4S2 264 aaPredicted RBP6.68□□□□□ -1.34
KTN1-222ENST00000555506 KRT82Q9NSB4 513 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 EFR3BQ9Y2G0 817 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 PCDHGC5Q9Y5F6 944 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 SYNGAP1Q96PV0 1343 aa6.68□□□□□ -1.34
KTN1-222ENST00000555506 FAM95CA0A1B0GW59 222 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 STK10O94804 968 aaKnown RBP6.67□□□□□ -1.34
KTN1-222ENST00000555506 TGFB1P01137 390 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 RAB6AP20340 208 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 LMNB1P20700 586 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 ASPAP45381 313 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 SOX9P48436 509 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 ZNF252P-AS1Q0IIN9 211 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 APOBRQ0VD83 1088 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 NFKBIBQ15653 356 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 KIF4BQ2VIQ3 1234 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 RASIP1Q5U651 963 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 MAP1SQ66K74 1059 aaPredicted RBP6.67□□□□□ -1.34
KTN1-222ENST00000555506 SHISA5Q8N114 240 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 SHKBP1Q8TBC3 707 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 GRIN3AQ8TCU5 1115 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 DBNDD2Q9BQY9 259 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 UBP1Q9NZI7 540 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 CYP8B1Q9UNU6 501 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 ROBO2Q9HCK4 1378 aa6.67□□□□□ -1.34
KTN1-222ENST00000555506 NASPP49321 788 aaPredicted RBP6.66□□□□□ -1.34
KTN1-222ENST00000555506 SOGA3Q5TF21 947 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 FAM196AQ6ZSG2 479 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 MFSD14AQ96MC6 490 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 LNPKQ9C0E8 428 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 MIR1-1HGQ9H1L0 117 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 ACSS3Q9H6R3 686 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 CBX8Q9HC52 389 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 GINM1Q9NU53 330 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 CRIM1Q9NZV1 1036 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 PRR19A6NJB7 356 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 SSBP05455 408 aaKnown RBP eCLIP6.66□□□□□ -1.34
KTN1-222ENST00000555506 NFICP08651 508 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 CRKP46108 304 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 LRRC14Q15048 493 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 GPBAR1Q8TDU6 330 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 EMILIN2Q9BXX0 1053 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 LRRC3Q9BY71 257 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 SEMA6CQ9H3T2 930 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 STRIP2Q9ULQ0 834 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 PCDHB5Q9Y5E4 795 aa6.66□□□□□ -1.34
KTN1-222ENST00000555506 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.65□□□□□ -1.35
KTN1-222ENST00000555506 F13A1P00488 732 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 F13BP05160 661 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 SLFN14P0C7P3 912 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 ADMP35318 185 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 ID3Q02535 119 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 LLGL2Q6P1M3 1020 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 PAOXQ6QHF9 649 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 BNC2Q6ZN30 1099 aaPredicted RBP6.65□□□□□ -1.35
KTN1-222ENST00000555506 SLITRK4Q8IW52 837 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 FBXL6Q8N531 539 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 GATAD2BQ8WXI9 593 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 NKD1Q969G9 470 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 YIPF2Q9BWQ6 316 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 CACNA2D2Q9NY47 1150 aa6.65□□□□□ -1.35
KTN1-222ENST00000555506 FAM221AA4D161 298 aa6.64□□□□□ -1.35
KTN1-222ENST00000555506 WDR64B1ANS9 1081 aa6.64□□□□□ -1.35
KTN1-222ENST00000555506 DYNC1LI2O43237 492 aaPredicted RBP6.64□□□□□ -1.35
KTN1-222ENST00000555506 MED26O95402 600 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms