RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 VGLL2Q8N8G2 317 aa10.99□□□□□ -0.65
PRKCH-213ENST00000555185 PRDM5Q9NQX1 630 aaPredicted RBP10.99□□□□□ -0.65
PRKCH-213ENST00000555185 SUGT1Q9Y2Z0 365 aa10.99□□□□□ -0.65
PRKCH-213ENST00000555185 CACNA1FO60840 1977 aa10.99□□□□□ -0.65
PRKCH-213ENST00000555185 TCF20Q9UGU0 1960 aaKnown RBP10.99□□□□□ -0.65
PRKCH-213ENST00000555185 CTNND1O60716 968 aaKnown RBP10.98□□□□□ -0.65
PRKCH-213ENST00000555185 HOXD11P31277 338 aaPredicted RBP10.98□□□□□ -0.65
PRKCH-213ENST00000555185 ZEB1P37275 1124 aaPredicted RBP10.98□□□□□ -0.65
PRKCH-213ENST00000555185 GCLCP48506 637 aaPredicted RBP10.98□□□□□ -0.65
PRKCH-213ENST00000555185 RTP1P59025 263 aa10.98□□□□□ -0.65
PRKCH-213ENST00000555185 PICALMQ13492 652 aa10.98□□□□□ -0.65
PRKCH-213ENST00000555185 BADQ92934 168 aa10.98□□□□□ -0.65
PRKCH-213ENST00000555185 NUDT12Q9BQG2 462 aa10.98□□□□□ -0.65
PRKCH-213ENST00000555185 TXNRD2Q9NNW7 524 aa10.98□□□□□ -0.65
PRKCH-213ENST00000555185 DDX4Q9NQI0 724 aaKnown RBP10.98□□□□□ -0.65
PRKCH-213ENST00000555185 C9orf78Q9NZ63 289 aaPredicted RBP10.98□□□□□ -0.65
PRKCH-213ENST00000555185 PRKAG2Q9UGJ0 569 aa10.98□□□□□ -0.65
PRKCH-213ENST00000555185 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
PRKCH-213ENST00000555185 RLFQ13129 1914 aa10.97□□□□□ -0.65
PRKCH-213ENST00000555185 BDP1A6H8Y1 2624 aa10.97□□□□□ -0.65
PRKCH-213ENST00000555185 PDE8BO95263 885 aa10.97□□□□□ -0.65
PRKCH-213ENST00000555185 SMAD3P84022 425 aaKnown RBP10.97□□□□□ -0.65
PRKCH-213ENST00000555185 PROCA1Q8NCQ7 364 aaPredicted RBP10.97□□□□□ -0.65
PRKCH-213ENST00000555185 NDUFB9Q9Y6M9 179 aa10.97□□□□□ -0.65
PRKCH-213ENST00000555185 RFX7Q2KHR2 1363 aa10.96□□□□□ -0.65
PRKCH-213ENST00000555185 RRP1BQ14684 758 aaKnown RBP10.96□□□□□ -0.65
PRKCH-213ENST00000555185 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.65
PRKCH-213ENST00000555185 WDR66Q8TBY9 1149 aa10.96□□□□□ -0.65
PRKCH-213ENST00000555185 ADAMTS19Q8TE59 1207 aa10.96□□□□□ -0.65
PRKCH-213ENST00000555185 NECAB3Q96P71 396 aaPredicted RBP10.96□□□□□ -0.65
PRKCH-213ENST00000555185 PORCNQ9H237 461 aa10.96□□□□□ -0.65
PRKCH-213ENST00000555185 BICC1Q9H694 974 aaKnown RBP10.96□□□□□ -0.65
PRKCH-213ENST00000555185 FLRT1Q9NZU1 646 aa10.96□□□□□ -0.65
PRKCH-213ENST00000555185 MORF4L1Q9UBU8 362 aa10.96□□□□□ -0.65
PRKCH-213ENST00000555185 LDHBP07195 334 aaKnown RBP10.95□□□□□ -0.66
PRKCH-213ENST00000555185 IFIT1P09914 478 aaKnown RBP10.95□□□□□ -0.66
PRKCH-213ENST00000555185 NBPF7P0C2Y1 421 aaPredicted RBP10.95□□□□□ -0.66
PRKCH-213ENST00000555185 XRCC5P13010 732 aaKnown RBP10.95□□□□□ -0.66
PRKCH-213ENST00000555185 FGFR2P21802 821 aa10.95□□□□□ -0.66
PRKCH-213ENST00000555185 CNGA1P29973 690 aa10.95□□□□□ -0.66
PRKCH-213ENST00000555185 EPHB4P54760 987 aa10.95□□□□□ -0.66
PRKCH-213ENST00000555185 MAP3K10Q02779 954 aa10.95□□□□□ -0.66
PRKCH-213ENST00000555185 Q3C1V9 767 aa10.95□□□□□ -0.66
PRKCH-213ENST00000555185 GJC2Q5T442 439 aaPredicted RBP10.95□□□□□ -0.66
PRKCH-213ENST00000555185 SLC4A10Q6U841 1118 aa10.95□□□□□ -0.66
PRKCH-213ENST00000555185 ZNF280CQ8ND82 737 aa10.95□□□□□ -0.66
PRKCH-213ENST00000555185 SOCS4Q8WXH5 440 aa10.95□□□□□ -0.66
PRKCH-213ENST00000555185 USP6NLQ92738 828 aa10.95□□□□□ -0.66
PRKCH-213ENST00000555185 P2RX7Q99572 595 aaKnown RBP10.95□□□□□ -0.66
PRKCH-213ENST00000555185 ENTPD3O75355 529 aa10.94□□□□□ -0.66
PRKCH-213ENST00000555185 MYCNP04198 464 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-213ENST00000555185 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-213ENST00000555185 PDE3AQ14432 1141 aa10.94□□□□□ -0.66
PRKCH-213ENST00000555185 PUM3Q15397 648 aaKnown RBP10.94□□□□□ -0.66
PRKCH-213ENST00000555185 TRIM60Q495X7 471 aa10.94□□□□□ -0.66
PRKCH-213ENST00000555185 ANO1Q5XXA6 986 aa10.94□□□□□ -0.66
PRKCH-213ENST00000555185 POTEEQ6S8J3 1075 aa10.94□□□□□ -0.66
PRKCH-213ENST00000555185 ANKRD44Q8N8A2 993 aa10.94□□□□□ -0.66
PRKCH-213ENST00000555185 GPRC5AQ8NFJ5 357 aa10.94□□□□□ -0.66
PRKCH-213ENST00000555185 RNPC3Q96LT9 517 aaKnown RBP10.94□□□□□ -0.66
PRKCH-213ENST00000555185 UHRF1Q96T88 793 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-213ENST00000555185 PAGR1Q9BTK6 254 aa10.94□□□□□ -0.66
PRKCH-213ENST00000555185 IDI2Q9BXS1 227 aa10.94□□□□□ -0.66
PRKCH-213ENST00000555185 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.94□□□□□ -0.66
PRKCH-213ENST00000555185 TRIM43BA6NCK2 446 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 ITGB8P26012 769 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 RGS2P41220 211 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 PABPC4Q13310 644 aaKnown RBP eCLIP10.93□□□□□ -0.662e-7■■■■■ 64.2
PRKCH-213ENST00000555185 MTMR2Q13614 643 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 SHROOM1Q2M3G4 852 aaPredicted RBP10.93□□□□□ -0.66
PRKCH-213ENST00000555185 MORN1Q5T089 497 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 GPR142Q7Z601 462 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 TRIM43Q96BQ3 446 aaPredicted RBP10.93□□□□□ -0.66
PRKCH-213ENST00000555185 ASB2Q96Q27 587 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 APBA2Q99767 749 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 PDLIM7Q9NR12 457 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 RBPJLQ9UBG7 517 aa10.93□□□□□ -0.66
PRKCH-213ENST00000555185 DDX20Q9UHI6 824 aaKnown RBP10.93□□□□□ -0.66
PRKCH-213ENST00000555185 PLXNA1Q9UIW2 1896 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 DNM1LO00429 736 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 VAMP4O75379 141 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 BTDP43251 543 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 HERVK_113P62684 666 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 CCDC85BQ15834 202 aaPredicted RBP10.92□□□□□ -0.66
PRKCH-213ENST00000555185 NCBP3Q53F19 620 aaKnown RBP10.92□□□□□ -0.66
PRKCH-213ENST00000555185 SLC39A5Q6ZMH5 540 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 PLEKHH3Q7Z736 793 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 CCAR1Q8IX12 1150 aaKnown RBP10.92□□□□□ -0.66
PRKCH-213ENST00000555185 TRPV1Q8NER1 839 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 THEGQ9P2T0 379 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 REV3LO60673 3130 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 XIRP2A4UGR9 3374 aa10.92□□□□□ -0.66
PRKCH-213ENST00000555185 GAKO14976 1311 aa10.91□□□□□ -0.66
PRKCH-213ENST00000555185 FANCIQ9NVI1 1328 aa10.91□□□□□ -0.66
PRKCH-213ENST00000555185 SLC5A1P13866 664 aa10.91□□□□□ -0.66
PRKCH-213ENST00000555185 DNAJB2P25686 324 aa10.91□□□□□ -0.66
PRKCH-213ENST00000555185 MAPK4P31152 587 aa10.91□□□□□ -0.66
PRKCH-213ENST00000555185 CYP2C19P33261 490 aa10.91□□□□□ -0.66
PRKCH-213ENST00000555185 ERVK-9P63128 1117 aa10.91□□□□□ -0.66
PRKCH-213ENST00000555185 ERVK-24P63145 666 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms