RNA–Protein interactions for RNA: ENST00000554791.5

CGRRF1-202, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 5

Gene CGRRF1, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-202ENST00000554791 TREML2Q5T2D2 321 aa28.33■■■□□ 2.13
CGRRF1-202ENST00000554791 COA7Q96BR5 231 aa28.33■■■□□ 2.13
CGRRF1-202ENST00000554791 NOL10Q9BSC4 688 aaKnown RBP28.33■■■□□ 2.13
CGRRF1-202ENST00000554791 FARP2O94887 1054 aaPredicted RBP28.32■■■□□ 2.12
CGRRF1-202ENST00000554791 INHAP05111 366 aa28.32■■■□□ 2.12
CGRRF1-202ENST00000554791 TRIM27P14373 513 aa28.32■■■□□ 2.12
CGRRF1-202ENST00000554791 SPP2Q13103 211 aa28.32■■■□□ 2.12
CGRRF1-202ENST00000554791 TEX11Q8IYF3 940 aa28.32■■■□□ 2.12
CGRRF1-202ENST00000554791 PNMA6EA0A0J9YXQ4 647 aa28.31■■■□□ 2.12
CGRRF1-202ENST00000554791 UQCRFS1P1P0C7P4 283 aa28.31■■■□□ 2.12
CGRRF1-202ENST00000554791 ATF7IPQ6VMQ6 1270 aa28.31■■■□□ 2.12
CGRRF1-202ENST00000554791 PROCA1Q8NCQ7 364 aaPredicted RBP28.31■■■□□ 2.12
CGRRF1-202ENST00000554791 ZNF280CQ8ND82 737 aa28.31■■■□□ 2.12
CGRRF1-202ENST00000554791 PXYLP1Q8TE99 480 aa28.31■■■□□ 2.12
CGRRF1-202ENST00000554791 CLUAP1Q96AJ1 413 aa28.31■■■□□ 2.12
CGRRF1-202ENST00000554791 COL2A1P02458 1487 aaPredicted RBP28.3■■■□□ 2.12
CGRRF1-202ENST00000554791 SGPL1O95470 568 aa28.3■■■□□ 2.12
CGRRF1-202ENST00000554791 MCAMP43121 646 aa28.3■■■□□ 2.12
CGRRF1-202ENST00000554791 IRF5Q13568 498 aa28.3■■■□□ 2.12
CGRRF1-202ENST00000554791 TBC1D2Q9BYX2 928 aa28.3■■■□□ 2.12
CGRRF1-202ENST00000554791 ATAD5Q96QE3 1844 aa28.29■■■□□ 2.12
CGRRF1-202ENST00000554791 PABPC4Q13310 644 aaKnown RBP eCLIP28.29■■■□□ 2.12
CGRRF1-202ENST00000554791 FAM110CQ1W6H9 321 aa28.29■■■□□ 2.12
CGRRF1-202ENST00000554791 UBE2Q1Q7Z7E8 422 aa28.29■■■□□ 2.12
CGRRF1-202ENST00000554791 TNNQ9UQP3 1299 aa28.29■■■□□ 2.12
CGRRF1-202ENST00000554791 NR2E3Q9Y5X4 410 aa28.29■■■□□ 2.12
CGRRF1-202ENST00000554791 CCER2I3L3R5 266 aa28.28■■■□□ 2.12
CGRRF1-202ENST00000554791 TFRCP02786 760 aaKnown RBP28.28■■■□□ 2.12
CGRRF1-202ENST00000554791 CAP2P40123 477 aa28.28■■■□□ 2.12
CGRRF1-202ENST00000554791 HMGCS2P54868 508 aa28.28■■■□□ 2.12
CGRRF1-202ENST00000554791 SH3RF3Q8TEJ3 882 aaPredicted RBP28.28■■■□□ 2.12
CGRRF1-202ENST00000554791 USP17L5A8MUK1 530 aa28.27■■■□□ 2.12
CGRRF1-202ENST00000554791 BCAR3O75815 825 aa28.27■■■□□ 2.12
CGRRF1-202ENST00000554791 OS9Q13438 667 aaPredicted RBP28.27■■■□□ 2.12
CGRRF1-202ENST00000554791 TTC39AQ5SRH9 613 aa28.27■■■□□ 2.12
CGRRF1-202ENST00000554791 AS3MTQ9HBK9 375 aa28.27■■■□□ 2.12
CGRRF1-202ENST00000554791 HERC5Q9UII4 1024 aaKnown RBP28.27■■■□□ 2.12
CGRRF1-202ENST00000554791 LOC285556D6RIA3 1793 aa28.27■■■□□ 2.12
CGRRF1-202ENST00000554791 BAG3O95817 575 aa28.26■■■□□ 2.11
CGRRF1-202ENST00000554791 GCLCP48506 637 aaPredicted RBP28.26■■■□□ 2.11
CGRRF1-202ENST00000554791 NAA16Q6N069 864 aaPredicted RBP28.26■■■□□ 2.11
CGRRF1-202ENST00000554791 DEFB118Q96PH6 123 aa28.26■■■□□ 2.11
CGRRF1-202ENST00000554791 SNRKQ9NRH2 765 aa28.26■■■□□ 2.11
CGRRF1-202ENST00000554791 AATFQ9NY61 560 aaKnown RBP eCLIP28.26■■■□□ 2.11
CGRRF1-202ENST00000554791 TRIOBPQ9H2D6 2365 aa28.26■■■□□ 2.11
CGRRF1-202ENST00000554791 CCDC158Q5M9N0 1113 aa28.25■■■□□ 2.11
CGRRF1-202ENST00000554791 RBM27Q9P2N5 1060 aaKnown RBP28.25■■■□□ 2.11
CGRRF1-202ENST00000554791 PI4KBQ9UBF8 816 aa28.25■■■□□ 2.11
CGRRF1-202ENST00000554791 TRIM34Q9BYJ4 488 aa28.24■■■□□ 2.11
CGRRF1-202ENST00000554791 DHX36Q9H2U1 1008 aaKnown RBP28.24■■■□□ 2.11
CGRRF1-202ENST00000554791 DOCK3Q8IZD9 2030 aa28.23■■■□□ 2.11
CGRRF1-202ENST00000554791 PLCG2P16885 1265 aa28.23■■■□□ 2.11
CGRRF1-202ENST00000554791 CAPN2P17655 700 aa28.23■■■□□ 2.11
CGRRF1-202ENST00000554791 RRP1BQ14684 758 aaKnown RBP28.23■■■□□ 2.11
CGRRF1-202ENST00000554791 ASCC2Q9H1I8 757 aaPredicted RBP28.23■■■□□ 2.11
CGRRF1-202ENST00000554791 MAST2Q6P0Q8 1798 aa28.23■■■□□ 2.11
CGRRF1-202ENST00000554791 EVI5O60447 810 aa28.22■■■□□ 2.11
CGRRF1-202ENST00000554791 TNNI3KQ59H18 835 aa28.22■■■□□ 2.11
CGRRF1-202ENST00000554791 TMEM57Q8N5G2 664 aa28.22■■■□□ 2.11
CGRRF1-202ENST00000554791 TGFBRAP1Q8WUH2 860 aa28.22■■■□□ 2.11
CGRRF1-202ENST00000554791 FPGT-TNNI3KV9GXZ4 949 aa28.22■■■□□ 2.11
CGRRF1-202ENST00000554791 IRX3P78415 501 aaPredicted RBP28.21■■■□□ 2.11
CGRRF1-202ENST00000554791 SH3D19Q5HYK7 790 aa28.21■■■□□ 2.11
CGRRF1-202ENST00000554791 MAPKAPK5Q8IW41 473 aa28.21■■■□□ 2.11
CGRRF1-202ENST00000554791 DBNDD2Q9BQY9 259 aa28.21■■■□□ 2.11
CGRRF1-202ENST00000554791 PAK6Q9NQU5 681 aaPredicted RBP28.21■■■□□ 2.11
CGRRF1-202ENST00000554791 TMOD4Q9NZQ9 345 aa28.21■■■□□ 2.11
CGRRF1-202ENST00000554791 MTMR2Q13614 643 aa28.2■■■□□ 2.1
CGRRF1-202ENST00000554791 ZKSCAN2Q63HK3 967 aa28.2■■■□□ 2.1
CGRRF1-202ENST00000554791 CRACR2BQ8N4Y2 399 aaPredicted RBP28.2■■■□□ 2.1
CGRRF1-202ENST00000554791 GPR108Q9NPR9 543 aa28.2■■■□□ 2.1
CGRRF1-202ENST00000554791 ZBTB7BO15156 539 aaPredicted RBP28.19■■■□□ 2.1
CGRRF1-202ENST00000554791 HMGCRP04035 888 aa28.19■■■□□ 2.1
CGRRF1-202ENST00000554791 ASNSP08243 561 aa28.19■■■□□ 2.1
CGRRF1-202ENST00000554791 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.19■■■□□ 2.1
CGRRF1-202ENST00000554791 FLT1P17948 1338 aa28.18■■■□□ 2.1
CGRRF1-202ENST00000554791 SURF6O75683 361 aaKnown RBP28.18■■■□□ 2.1
CGRRF1-202ENST00000554791 POLA2Q14181 598 aa28.18■■■□□ 2.1
CGRRF1-202ENST00000554791 CYP2E1P05181 493 aaPredicted RBP28.17■■■□□ 2.1
CGRRF1-202ENST00000554791 BACE1P56817 501 aa28.17■■■□□ 2.1
CGRRF1-202ENST00000554791 PAWRQ96IZ0 340 aaKnown RBP28.17■■■□□ 2.1
CGRRF1-202ENST00000554791 WDR18Q9BV38 432 aa28.17■■■□□ 2.1
CGRRF1-202ENST00000554791 SIPA1L1O43166 1804 aa28.17■■■□□ 2.1
CGRRF1-202ENST00000554791 PPP4CP60510 307 aa28.16■■■□□ 2.1
CGRRF1-202ENST00000554791 ATP8B2P98198 1209 aa28.16■■■□□ 2.1
CGRRF1-202ENST00000554791 ADGRA1Q86SQ6 560 aa28.16■■■□□ 2.1
CGRRF1-202ENST00000554791 FOXP4Q8IVH2 680 aaPredicted RBP28.16■■■□□ 2.1
CGRRF1-202ENST00000554791 CRISPLD2Q9H0B8 497 aa28.16■■■□□ 2.1
CGRRF1-202ENST00000554791 C1orf115Q9H7X2 142 aa28.16■■■□□ 2.1
CGRRF1-202ENST00000554791 PALD1Q9ULE6 856 aa28.16■■■□□ 2.1
CGRRF1-202ENST00000554791 GDF11O95390 407 aa28.15■■■□□ 2.1
CGRRF1-202ENST00000554791 HLA-DOAP06340 250 aa28.15■■■□□ 2.1
CGRRF1-202ENST00000554791 ZAP70P43403 619 aa28.15■■■□□ 2.1
CGRRF1-202ENST00000554791 NECAB2Q7Z6G3 386 aa28.15■■■□□ 2.1
CGRRF1-202ENST00000554791 FTSJ3Q8IY81 847 aaKnown RBP28.15■■■□□ 2.1
CGRRF1-202ENST00000554791 SSH3Q8TE77 659 aa28.15■■■□□ 2.1
CGRRF1-202ENST00000554791 MORF4L1Q9UBU8 362 aa28.15■■■□□ 2.1
CGRRF1-202ENST00000554791 SAP30BPQ9UHR5 308 aaKnown RBP28.15■■■□□ 2.1
CGRRF1-202ENST00000554791 CDK5RAP2Q96SN8 1893 aa28.15■■■□□ 2.1
CGRRF1-202ENST00000554791 C19orf81C9J6K1 198 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms